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CAN33_3765-T1, CAN33_3765-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_3765-T1
Unique NameCAN33_3765-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:2399880..2401241-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_3765-T1 ID=CAN33_3765-T1|Name=CAN33_3765-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1362bp|location=Sequence derived from alignment at NKJJ01000004.1:2399880..2401241- (Aspergillus niger FDAARGOS_311)
ATGGAATCCTCATGGCGTGCCCAAAATCCGATACCTGCCGCACTGTTGCA
ACCCTCCAAGTGGCTCCCACTGTACGAGGAGTTCGTGACGAAGAATGCTA
GCTCTGTGAGCCAAGTAGAGTCCGCGTTGAGGTCTCTAACATACATCATC
CCGGGTTAGTGCATGAAGCTTGAAGTACAGGAATTTGGTCGAGGAAATGA
AAGGCTGAAACCGTGTGCAGGGAGATACCGAGATTCGGAGATAAGCTCAG
AGTGCGGTACGTTATTCAAGTGTTTCTAATGGTGATCTTCTAGACAAGGA
AGCCATTCGCTTGATTCTGACTTCTGTGAAAAGTGCATTCAGGGGTACAG
CTTCTGTCACTCTACCATGACTCTCTGGTTTCGCGAGTCATTTCTAGGTT
ACCGTCAACAATCCCGCGGCCTACACCATCACCTCATGCGCGCTACACGA
AGTATTGGACCTCCCACTCTTCACTGTATCAGAGAATCGCCCTCGCATTA
CAGATGATCCAATATACAGAACTGCTGTGGGAGATGGCGGCTCGGCGTCG
TGGTGAGAAGGTGCGCTGGCGTGTCGTCGTATTAATCGAAGCCGCTAAGG
CGATCTGTCGCCTGTTACTCCTTCGTCTCACCAACTCTAGACCATTGGTC
AGCCCTCCACTTCCTGAGCGGGAAGTAGATCCCAGATCGCTGGAAGAAGA
GGACAGTAGCGACTGGAATGGCATGCAGACCCCTATTAGCGAACGGTCGT
CGGATCTGTGCTGGACTATGCCTCGCACAGGGCTGTCGCTTCCTTCTCTG
CCTAATGTGGATGACCTTTCAAACTACTTGATATCCAAAGTTCTTACGGC
CGACGATATCAAGCCACCGAAAATGCTGTTGCACCGAGTCACTGGCCAGG
GCCAGTTTGCTGAGATTCTATACATCCTCCGACCAGTAGTTTATGCGCTC
ATGCTGCAACGATACTGCAAAGACAGGCGGAGTTGGAAACCCTGGCTTAT
CGGTTTTGGCATGGAGTATGGCTGTCGACAACTAGCCAAAGCTGATCTTC
GCGAAAGAGTCGCAGGCGGCCTTCGGGGATTGACCGGGCTGGAGCGGGAG
GAACTAAGGAAGAGAGGCTGGGCGATGGGTTGGTGGTTTATGCGCGGGGC
TTTCTATGAGAATATTACCAAGTATGGCACTCTAGCCCTTCCCAAACTAC
TGATAAGGAGTTAAAGTATTGTACTAACTTTTACATAGATCCTGGTTGAA
AGGGTTGACCGGCAAAATGAGGGGCAAACCTCTGCTTGATTTGGTAGGCA
GTGTCATTGAGGATTACGAGTATCTCTGGGACAACTACTACTTCTCGACT
ACAACACTGTGA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:2399880..2401241-

>CAN33_3765-T1 ID=CAN33_3765-T1|Name=CAN33_3765-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4608bp|location=Sequence derived from alignment at NKJJ01000004.1:2399880..2401241- (Aspergillus niger FDAARGOS_311)
ATCCTGGTTGAAAGGGTTGACCGGCAAAATGAGGGGCAAACCTCTGCTTG
ATTTGGTAGGCAGTGTCATTGAGGATTACGAGTATCTCTGGGACAACTAC
TACTTCTCGACTACAACACTGTGATGCATTCAGGGGTACAGCTTCTGTCA
CTCTACCATGACTCTCTGGTTTCGCGAGTCATTTCTAGGTTACCGTCAAC
AATCCCGCGGCCTACACCATCACCTCATGCGCGCTACACGAAGTATTGGA
CCTCCCACTCTTCACTGTATCAGAGAATCGCCCTCGCATTACAGATGATC
CAATATACAGAACTGCTGTGGGAGATGGCGGCTCGGCGTCGTGGTGAGAA
GGTGCGCTGGCGTGTCGTCGTATTAATCGAAGCCGCTAAGGCGATCTGTC
GCCTGTTACTCCTTCGTCTCACCAACTCTAGACCATTGGTCAGCCCTCCA
CTTCCTGAGCGGGAAGTAGATCCCAGATCGCTGGAAGAAGAGGACAGTAG
CGACTGGAATGGCATGCAGACCCCTATTAGCGAACGGTCGTCGGATCTGT
GCTGGACTATGCCTCGCACAGGGCTGTCGCTTCCTTCTCTGCCTAATGTG
GATGACCTTTCAAACTACTTGATATCCAAAGTTCTTACGGCCGACGATAT
CAAGCCACCGAAAATGCTGTTGCACCGAGTCACTGGCCAGGGCCAGTTTG
CTGAGATTCTATACATCCTCCGACCAGTAGTTTATGCGCTCATGCTGCAA
CGATACTGCAAAGACAGGCGGAGTTGGAAACCCTGGCTTATCGGTTTTGG
CATGGAGTATGGCTGTCGACAACTAGCCAAAGCTGATCTTCGCGAAAGAG
TCGCAGGCGGCCTTCGGGGATTGACCGGGCTGGAGCGGGAGGAACTAAGG
AAGAGAGGCTGGGCGATGGGTTGGTGGTTTATGCGCGGGGCTTTCTATGA
GAATATTACCAAGGAGATACCGAGATTCGGAGATAAGCTCAGAGTGCGAT
GGAATCCTCATGGCGTGCCCAAAATCCGATACCTGCCGCACTGTTGCAAC
CCTCCAAGTGGCTCCCACTGTACGAGGAGTTCGTGACGAAGAATGCTAGC
TCTGTGAGCCAAGTAGAGTCCGCGTTGAGGTCTCTAACATACATCATCCC
GGATCCTGGTTGAAAGGGTTGACCGGCAAAATGAGGGGCAAACCTCTGCT
TGATTTGGTAGGCAGTGTCATTGAGGATTACGAGTATCTCTGGGACAACT
ACTACTTCTCGACTACAACACTGTGATGCATTCAGGGGTACAGCTTCTGT
CACTCTACCATGACTCTCTGGTTTCGCGAGTCATTTCTAGGTTACCGTCA
ACAATCCCGCGGCCTACACCATCACCTCATGCGCGCTACACGAAGTATTG
GACCTCCCACTCTTCACTGTATCAGAGAATCGCCCTCGCATTACAGATGA
TCCAATATACAGAACTGCTGTGGGAGATGGCGGCTCGGCGTCGTGGTGAG
AAGGTGCGCTGGCGTGTCGTCGTATTAATCGAAGCCGCTAAGGCGATCTG
TCGCCTGTTACTCCTTCGTCTCACCAACTCTAGACCATTGGTCAGCCCTC
CACTTCCTGAGCGGGAAGTAGATCCCAGATCGCTGGAAGAAGAGGACAGT
AGCGACTGGAATGGCATGCAGACCCCTATTAGCGAACGGTCGTCGGATCT
GTGCTGGACTATGCCTCGCACAGGGCTGTCGCTTCCTTCTCTGCCTAATG
TGGATGACCTTTCAAACTACTTGATATCCAAAGTTCTTACGGCCGACGAT
ATCAAGCCACCGAAAATGCTGTTGCACCGAGTCACTGGCCAGGGCCAGTT
TGCTGAGATTCTATACATCCTCCGACCAGTAGTTTATGCGCTCATGCTGC
AACGATACTGCAAAGACAGGCGGAGTTGGAAACCCTGGCTTATCGGTTTT
GGCATGGAGTATGGCTGTCGACAACTAGCCAAAGCTGATCTTCGCGAAAG
AGTCGCAGGCGGCCTTCGGGGATTGACCGGGCTGGAGCGGGAGGAACTAA
GGAAGAGAGGCTGGGCGATGGGTTGGTGGTTTATGCGCGGGGCTTTCTAT
GAGAATATTACCAAGGAGATACCGAGATTCGGAGATAAGCTCAGAGTGCG
ATGGAATCCTCATGGCGTGCCCAAAATCCGATACCTGCCGCACTGTTGCA
ACCCTCCAAGTGGCTCCCACTGTACGAGGAGTTCGTGACGAAGAATGCTA
GCTCTGTGAGCCAAGTAGAGTCCGCGTTGAGGTCTCTAACATACATCATC
CCGGATCCTGGTTGAAAGGGTTGACCGGCAAAATGAGGGGCAAACCTCTG
CTTGATTTGGTAGGCAGTGTCATTGAGGATTACGAGTATCTCTGGGACAA
CTACTACTTCTCGACTACAACACTGTGATGCATTCAGGGGTACAGCTTCT
GTCACTCTACCATGACTCTCTGGTTTCGCGAGTCATTTCTAGGTTACCGT
CAACAATCCCGCGGCCTACACCATCACCTCATGCGCGCTACACGAAGTAT
TGGACCTCCCACTCTTCACTGTATCAGAGAATCGCCCTCGCATTACAGAT
GATCCAATATACAGAACTGCTGTGGGAGATGGCGGCTCGGCGTCGTGGTG
AGAAGGTGCGCTGGCGTGTCGTCGTATTAATCGAAGCCGCTAAGGCGATC
TGTCGCCTGTTACTCCTTCGTCTCACCAACTCTAGACCATTGGTCAGCCC
TCCACTTCCTGAGCGGGAAGTAGATCCCAGATCGCTGGAAGAAGAGGACA
GTAGCGACTGGAATGGCATGCAGACCCCTATTAGCGAACGGTCGTCGGAT
CTGTGCTGGACTATGCCTCGCACAGGGCTGTCGCTTCCTTCTCTGCCTAA
TGTGGATGACCTTTCAAACTACTTGATATCCAAAGTTCTTACGGCCGACG
ATATCAAGCCACCGAAAATGCTGTTGCACCGAGTCACTGGCCAGGGCCAG
TTTGCTGAGATTCTATACATCCTCCGACCAGTAGTTTATGCGCTCATGCT
GCAACGATACTGCAAAGACAGGCGGAGTTGGAAACCCTGGCTTATCGGTT
TTGGCATGGAGTATGGCTGTCGACAACTAGCCAAAGCTGATCTTCGCGAA
AGAGTCGCAGGCGGCCTTCGGGGATTGACCGGGCTGGAGCGGGAGGAACT
AAGGAAGAGAGGCTGGGCGATGGGTTGGTGGTTTATGCGCGGGGCTTTCT
ATGAGAATATTACCAAGGAGATACCGAGATTCGGAGATAAGCTCAGAGTG
CGATGGAATCCTCATGGCGTGCCCAAAATCCGATACCTGCCGCACTGTTG
CAACCCTCCAAGTGGCTCCCACTGTACGAGGAGTTCGTGACGAAGAATGC
TAGCTCTGTGAGCCAAGTAGAGTCCGCGTTGAGGTCTCTAACATACATCA
TCCCGGATCCTGGTTGAAAGGGTTGACCGGCAAAATGAGGGGCAAACCTC
TGCTTGATTTGGTAGGCAGTGTCATTGAGGATTACGAGTATCTCTGGGAC
AACTACTACTTCTCGACTACAACACTGTGATGCATTCAGGGGTACAGCTT
CTGTCACTCTACCATGACTCTCTGGTTTCGCGAGTCATTTCTAGGTTACC
GTCAACAATCCCGCGGCCTACACCATCACCTCATGCGCGCTACACGAAGT
ATTGGACCTCCCACTCTTCACTGTATCAGAGAATCGCCCTCGCATTACAG
ATGATCCAATATACAGAACTGCTGTGGGAGATGGCGGCTCGGCGTCGTGG
TGAGAAGGTGCGCTGGCGTGTCGTCGTATTAATCGAAGCCGCTAAGGCGA
TCTGTCGCCTGTTACTCCTTCGTCTCACCAACTCTAGACCATTGGTCAGC
CCTCCACTTCCTGAGCGGGAAGTAGATCCCAGATCGCTGGAAGAAGAGGA
CAGTAGCGACTGGAATGGCATGCAGACCCCTATTAGCGAACGGTCGTCGG
ATCTGTGCTGGACTATGCCTCGCACAGGGCTGTCGCTTCCTTCTCTGCCT
AATGTGGATGACCTTTCAAACTACTTGATATCCAAAGTTCTTACGGCCGA
CGATATCAAGCCACCGAAAATGCTGTTGCACCGAGTCACTGGCCAGGGCC
AGTTTGCTGAGATTCTATACATCCTCCGACCAGTAGTTTATGCGCTCATG
CTGCAACGATACTGCAAAGACAGGCGGAGTTGGAAACCCTGGCTTATCGG
TTTTGGCATGGAGTATGGCTGTCGACAACTAGCCAAAGCTGATCTTCGCG
AAAGAGTCGCAGGCGGCCTTCGGGGATTGACCGGGCTGGAGCGGGAGGAA
CTAAGGAAGAGAGGCTGGGCGATGGGTTGGTGGTTTATGCGCGGGGCTTT
CTATGAGAATATTACCAAGGAGATACCGAGATTCGGAGATAAGCTCAGAG
TGCGATGGAATCCTCATGGCGTGCCCAAAATCCGATACCTGCCGCACTGT
TGCAACCCTCCAAGTGGCTCCCACTGTACGAGGAGTTCGTGACGAAGAAT
GCTAGCTCTGTGAGCCAAGTAGAGTCCGCGTTGAGGTCTCTAACATACAT
CATCCCGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_3765CAN33_3765Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3765-T1CAN33_3765-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3765-T1.cdsCAN33_3765-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3765-T1.exon4CAN33_3765-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_3765-T1.exon3CAN33_3765-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_3765-T1.exon2CAN33_3765-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_3765-T1.exon1CAN33_3765-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR013919
DBxrefPFAM:PF08610
ProductPeroxisomal membrane protein (Pex16) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:2399880..2401241 -
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