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CAN33_37795-T1, CAN33_37795-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_37795-T1
Unique NameCAN33_37795-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1059176..1061365+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_37795-T1 ID=CAN33_37795-T1|Name=CAN33_37795-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2190bp|location=Sequence derived from alignment at NKJJ01000017.1:1059176..1061365+ (Aspergillus niger FDAARGOS_311)
ATGGATGCGTTTAAGTTATTGACAAGGTCCACCAAGTTCAAGGCTGGTAA
TTCCCTGTCTTCGACACTGCCTTCCAAAGGCAAGGCCGAGAACCCCCAGC
TTTTCCGTGACGCAGAGGCCGAAAAGCTTCTGGAGTCAAATGCTTTTGGG
AAAAAGAGAAAGCGCACGCAAGCTGCAGGTGATTCAGATGCAGAAGATGG
CAATGCTGGCGATCTAGATTTTTTCGGTTCAGGTAAACGGTCTGCGGCCA
GTGCCCCATCGAAAAAGGATGAAGATGGACCTTCCGAGCAGAAAGATGCA
TCTGACTCCGAAGGCGATGATTCGATGGATGAAGTTGAGCGCCGGACGAT
CTTGAACTCTCACAAGATCAAGGTCACTGATATGCGTGATCTTGAAGAAC
TTCAGCCCACTCAGCCTCAGAAGGAGGAATCTAAGAAGAAAAAGAAGAAG
AGAAAGCAGCAGGAAGAGGAGCCCGCTCAGACGCTCACTAAGAAGGAGCA
GAAGAAAGCCCGGCGGTTGTTTCCGGAGCCCTTGGTCTCCTTTAAACAGC
TGCGTACGAAGTACAATATTTCCCGACGTCTGGCGGAAAACATTGCTGAG
CAAGGCTTTACGGTCCCTACTGAAGTTCAACTAGGAAGTCTTCCTCTTTT
GCTCGGAGACCAATCAGTGCCGCAGAAGTCGGGCACTGAAAAGAGCACCG
AACCGGATCTACTGGTCGTTGCGCCTACAGGAAGTGGCAAGACGCTATCA
TTTATGATCCCGGTGATCAACAAGATTGTCCGGCACCATCACGAAAAGCC
AGAGGAACGGGGCATCTTGTCTGTTGTAATTGCTCCGACGAAAGAGCTTG
CTAGCCAAATCGTCAACGAAGGCCGAAAGTTAGCTTTGGGAACTGGTGTG
AAGATCACTTTGATGAAGAAGGGCATGCGTGTGGTAGAGCGTGATGATGA
AGACGATAGCAAAGACGTCCTGGATGAAGATGATTCGGAATCGTCGGGCT
CTGAAGATGATGAAAAGGCCACAGCAAAGAACAGCAAAGGGAAGGCGCCG
GTTACCAAGAGCGACATCCTTGTAACAACACCATTGCTTCTTGTTAACGC
GCTTTCTGCAAACCGGACAAAACCGTTGGCGACTCTCCCTCTTGTGAGAA
ATGTGGTTCTGGATGAGGCGGATGTTCTCCTGGATCCTCTGTTCCGTGAC
CAAACACTTGACATCTGGCGCTCCTGCACGCATCCTGAGCTTCGAGCAAG
TCTCTGGTCAGCGACGATGGGGTCAAATGTCGAAGACCTCGCTAAGTCAA
CGATCAAGGAGCGGAAAGATACTCTAAGCGAGACCAAGTCTTATCCGCTA
CTCCGTTTGGTGGTTGGCCTCAAGGACTCTGCTATTCCAAACATCAAGCA
CAAGCTGGTTTATGCTGCCACTGAGCAAGGAAAGTTGCTCGGTCTTCGGC
AGCTTTTGCACCCCGCCGCAGCATCATCAACGGACATTCGTTTACGCCCA
CCTTTCTTGATCTTTACTCAGACGATTCCCAGAGCGGTTGCGTTACATTC
AGAACTGCGCTACGATATCCCTCCCGAGGCGGGTGGCTCGTCACGTATAG
CTGTCCTCCACTCTGAGTTATCGGACGGCCAACGTTCCGAGATCATGAAG
CAATTCCGGAAGGGTGAAATTTGGATTCTGGTCACCACGGATCTTTTGGC
CCGTGGTGTTGACTTCAGAGGCATTAACGGGGTTGTTAACTACGACATCC
CGAACTCCGCTGCTGTCTACGTCCACCGTGTTGGACGGACGGGCAGAGCT
GGCCGTGAAGGTGGCATTGCAGTCACATACTACACCAAGGAGGATATCCC
TTATGTCAAGAGCATTGCCAATGTAATTGACGTCAGCGAGAAGTTACGGG
GTACAGATGAGGAGAAGTCTGTACAGAAGTGGCTGTTGGACGCTCTTCCG
GACCTCAGCAAGAAGAAGAAGGAGGAGCTCAAGAAGCACGGCGTCAAGGC
CAGGCAGACCCAAGGCACCAAAGACGACAAGAAGACAAGAATTAGCACCA
AGAGTGGTTACGAGCGACGCCAGGAGAACAAGAAGAAGGCTCTCATCTCA
GCCAGCCGCAATAGGAAATCTCAACCAAAGTCAGGCGCAGACTCTGGCAG
TGACGACGACAATCAGGGCTGGCAAGGACTCGAGGACTAG
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1059176..1061365+

>CAN33_37795-T1 ID=CAN33_37795-T1|Name=CAN33_37795-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4122bp|location=Sequence derived from alignment at NKJJ01000017.1:1059176..1061365+ (Aspergillus niger FDAARGOS_311)
ATGGATGCGTTTAAGTTATTGACAAGGTCCACCAAGTTCAAGGCTGGTAA
TTCCCTGTCTTCGACACTGCCTTCCAAAGGCAAGGCCGAGAACCCCCAGC
TTTTCCGTGACGCAGAGGCCGAAAAGCTTCTGGAGTCAAATGCTTTTGGG
AAAAAGAGAAAGCGCACGCAAGCTGCAGGTGATTCAGATGCAGAAGATGG
CAATGCTGGCGATCTAGATTTTTTCGGTTCAGGTAAACGGTCTGCGGCCA
GTGCCCCATCGAAAAAGGATGAAGATGGACCTTCCGAGCAGAAAGATGCA
TCTGACTCCGAAGGCGATGATTCGATGGATGAAGTTGAGCGCCGGACGAT
CTTGAACTCTCACAAGATCAAGAAGAAAGCCCGGCGGTTGTTTCCGGAGC
CCTTGGTCTCCTTTAAACAGCTGCGTACGAAGTACAATATTTCCCGACGT
CTGGCGGAAAACATTGCTGAGCAAGGCTTTACGGTCCCTACTGAAGTTCA
ACTAGGAAGTCTTCCTCTTTTGCTCGGAGACCAATCAGTGCCGCAGAAGT
CGGGCACTGAAAAGAGCACCGAACCGGATCTACTGGTCGTTGCGCCTACA
GGAAGTGGCAAGACGCTATCATTTATGATCCCGGTGATCAACAAGATTGT
CCGGCACCATCACGAAAAGCCAGAGGAACGGGGCATCTTGTCTGTTGTAA
TTGCTCCGACGAAAGAGCTTGCTAGCCAAATCGTCAACGAAGGCCGAAAG
TTAGCTTTGGGAACTGGTGTGAAGATCACTTTGATGAAGAAGGGCATGCG
TGTGGTAGAGCGTGATGATGAAGACGATAGCAAAGACGTCCTGGATGAAG
ATGATTCGGAATCGTCGGGCTCTGAAGATGATGAAAAGGCCACAGCAAAG
AACAGCAAAGGGAAGGCGCCGGTTACCAAGAGCGACATCCTTGTAACAAC
ACCATTGCTTCTTGTTAACGCGCTTTCTGCAAACCGGACAAAACCGTTGG
CGACTCTCCCTCTTGTGAGAAATGTGGTTCTGGATGAGGCGGATGTTCTC
CTGGATCCTCTGTTCCGTGACCAAACACTTGACATCTGGCGCTCCTGCAC
GCATCCTGAGCTTCGAGCAAGTCTCTGGTCAGCGACGATGGGGTCAAATG
TCGAAGACCTCGCTAAGTCAACGATCAAGGAGCGGAAAGATACTCTAAGC
GAGACCAAGTCTTATCCGCTACTCCGTTTGGTGGTTGGCCTCAAGGACTC
TGCTATTCCAAACATCAAGCACAAGCTGGTTTATGCTGCCACTGAGCAAG
GAAAGTTGCTCGGTCTTCGGCAGCTTTTGCACCCCGCCGCAGCATCATCA
ACGGACATTCGTTTACGCCCACCTTTCTTGATCTTTACTCAGACGATTCC
CAGAGCGGTTGCGTTACATTCAGAACTGCGCTACGATATCCCTCCCGAGG
CGGGTGGCTCGTCACGTATAGCTGTCCTCCACTCTGAGTTATCGGACGGC
CAACGTTCCGAGATCATGAAGCAATTCCGGAAGGGTGAAATTTGGATTCT
GGTCACCACGGATCTTTTGGCCCGTGGTGTTGACTTCAGAGGCATTAACG
GGGTTGTTAACTACGACATCCCGAACTCCGCTGCTGTCTACGTCCACCGT
GTTGGACGGACGGGCAGAGCTGGCCGTGAAGGTGGCATTGCAGTCACATA
CTACACCAAGGAGGATATCCCTTATGTCAAGAGCATTGCCAATGTAATTG
ACGTCAGCGAGAAGTTACGGGGTACAGATGAGGAGAAGTCTGTACAGAAG
TGGCTGTTGGACGCTCTTCCGGACCTCAGCAAGAAGAAGAAGGAGGAGCT
CAAGAAGCACGGCGTCAAGGCCAGGCAGACCCAAGGCACCAAAGACGACA
AGAAGACAAGAATTAGCACCAAGAGTGGTTACGAGCGACGCCAGGAGAAC
AAGAAGAAGGCTCTCATCTCAGCCAGCCGCAATAGGAAATCTCAACCAAA
GTCAGGCGCAGACTCTGGCAGTGACGACGACAATCAGGGCTGGCAAGGAC
TCGAGGACTAGATGGATGCGTTTAAGTTATTGACAAGGTCCACCAAGTTC
AAGGCTGGTAATTCCCTGTCTTCGACACTGCCTTCCAAAGGCAAGGCCGA
GAACCCCCAGCTTTTCCGTGACGCAGAGGCCGAAAAGCTTCTGGAGTCAA
ATGCTTTTGGGAAAAAGAGAAAGCGCACGCAAGCTGCAGGTGATTCAGAT
GCAGAAGATGGCAATGCTGGCGATCTAGATTTTTTCGGTTCAGGTAAACG
GTCTGCGGCCAGTGCCCCATCGAAAAAGGATGAAGATGGACCTTCCGAGC
AGAAAGATGCATCTGACTCCGAAGGCGATGATTCGATGGATGAAGTTGAG
CGCCGGACGATCTTGAACTCTCACAAGATCAAGAAGAAAGCCCGGCGGTT
GTTTCCGGAGCCCTTGGTCTCCTTTAAACAGCTGCGTACGAAGTACAATA
TTTCCCGACGTCTGGCGGAAAACATTGCTGAGCAAGGCTTTACGGTCCCT
ACTGAAGTTCAACTAGGAAGTCTTCCTCTTTTGCTCGGAGACCAATCAGT
GCCGCAGAAGTCGGGCACTGAAAAGAGCACCGAACCGGATCTACTGGTCG
TTGCGCCTACAGGAAGTGGCAAGACGCTATCATTTATGATCCCGGTGATC
AACAAGATTGTCCGGCACCATCACGAAAAGCCAGAGGAACGGGGCATCTT
GTCTGTTGTAATTGCTCCGACGAAAGAGCTTGCTAGCCAAATCGTCAACG
AAGGCCGAAAGTTAGCTTTGGGAACTGGTGTGAAGATCACTTTGATGAAG
AAGGGCATGCGTGTGGTAGAGCGTGATGATGAAGACGATAGCAAAGACGT
CCTGGATGAAGATGATTCGGAATCGTCGGGCTCTGAAGATGATGAAAAGG
CCACAGCAAAGAACAGCAAAGGGAAGGCGCCGGTTACCAAGAGCGACATC
CTTGTAACAACACCATTGCTTCTTGTTAACGCGCTTTCTGCAAACCGGAC
AAAACCGTTGGCGACTCTCCCTCTTGTGAGAAATGTGGTTCTGGATGAGG
CGGATGTTCTCCTGGATCCTCTGTTCCGTGACCAAACACTTGACATCTGG
CGCTCCTGCACGCATCCTGAGCTTCGAGCAAGTCTCTGGTCAGCGACGAT
GGGGTCAAATGTCGAAGACCTCGCTAAGTCAACGATCAAGGAGCGGAAAG
ATACTCTAAGCGAGACCAAGTCTTATCCGCTACTCCGTTTGGTGGTTGGC
CTCAAGGACTCTGCTATTCCAAACATCAAGCACAAGCTGGTTTATGCTGC
CACTGAGCAAGGAAAGTTGCTCGGTCTTCGGCAGCTTTTGCACCCCGCCG
CAGCATCATCAACGGACATTCGTTTACGCCCACCTTTCTTGATCTTTACT
CAGACGATTCCCAGAGCGGTTGCGTTACATTCAGAACTGCGCTACGATAT
CCCTCCCGAGGCGGGTGGCTCGTCACGTATAGCTGTCCTCCACTCTGAGT
TATCGGACGGCCAACGTTCCGAGATCATGAAGCAATTCCGGAAGGGTGAA
ATTTGGATTCTGGTCACCACGGATCTTTTGGCCCGTGGTGTTGACTTCAG
AGGCATTAACGGGGTTGTTAACTACGACATCCCGAACTCCGCTGCTGTCT
ACGTCCACCGTGTTGGACGGACGGGCAGAGCTGGCCGTGAAGGTGGCATT
GCAGTCACATACTACACCAAGGAGGATATCCCTTATGTCAAGAGCATTGC
CAATGTAATTGACGTCAGCGAGAAGTTACGGGGTACAGATGAGGAGAAGT
CTGTACAGAAGTGGCTGTTGGACGCTCTTCCGGACCTCAGCAAGAAGAAG
AAGGAGGAGCTCAAGAAGCACGGCGTCAAGGCCAGGCAGACCCAAGGCAC
CAAAGACGACAAGAAGACAAGAATTAGCACCAAGAGTGGTTACGAGCGAC
GCCAGGAGAACAAGAAGAAGGCTCTCATCTCAGCCAGCCGCAATAGGAAA
TCTCAACCAAAGTCAGGCGCAGACTCTGGCAGTGACGACGACAATCAGGG
CTGGCAAGGACTCGAGGACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ROK1CAN33_37795Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37795-T1.exon1CAN33_37795-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_37795-T1.exon2CAN33_37795-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37795-T1.cdsCAN33_37795-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37795-T1CAN33_37795-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
ProductRNA-dependent ATPase rok1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1059176..1061365 +
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