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CAN33_3780-T1, CAN33_3780-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_3780-T1
Unique NameCAN33_3780-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:2406953..2408277+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_3780-T1 ID=CAN33_3780-T1|Name=CAN33_3780-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1325bp|location=Sequence derived from alignment at NKJJ01000004.1:2406953..2408277+ (Aspergillus niger FDAARGOS_311)
ATGAGTTTCCAAGCTGGAGGTCGTGGCTGCTTCAACTGTGAGTCCCTCCC
CCGCTCTGTTCCGTCGATGGTCAAACCTGTGCCCTTCGATTCTGTCATGC
ACCTTGTGTGCCTCCATTCCCGCAGCTCCAGCCGAGAGAGGGAAAAAAAG
TTTCCTTGATTACCATGATATGATTTCCCATCATCCACCGAGTTTTGCTT
TATGTCCTCAGTTAAAAGCTGAGATCTTTTGACCTTCCATGACCATCTAT
CCGTCCCCATTTCTCTCATAGCGAATGATCCTGTCGTCTTAGCGCGGTGG
TTACCATCCCTGGCGAAGCGAATCTCTGGATTGGTACGGAAAAGCTAACA
AGAAATCTTCATTCATTTTAGGCGGTGATGCTTCCCACCAGGTAAACCTT
TCCCTGTCACCATCGTCTCCTCAGAGCATCCTCAGTCAGCTTTTTTTTTT
TTTTCTTTCTTTCTGGGGTTGTGCCTATAATCATGGTTTGGCAACGTTCT
AATCTCTACAGGCCCGTGACTGTCCCAAGAAGGGCACTCCCACCTGGTAT
GCTTAACTTGCACTGTCCATTTTCCTCTTGTTGTAAACATTATTGACTAA
ACTCGATAGCTACAACTGTGGTGGTATGTCTCCCGACCTTGTCTCCTCTA
CATTAGTGTCCAATCTCCCTATCCCTTCTCGTTCACTGGCCTATTTTCAT
TGCGCCTTTTTCCGTTGATCCTCAGCCACTCTATCTAACCGCACCTTGGT
ACCATTACAGGACAGGGACACGTCAGTAAGTCAAACCAGCGAATTCTCCA
GTTGCTTCTCCGTCTTTTCATTATGCTTTTTCCTTTTTCTTTCGGAGATG
CTAAGAAGCCTATCATCCAGGCCGTGAATGCACTGTAGCTCCCAAGGAGA
AGTCCTGCTACCGCTGCGGTGGTGTGGGCCACATCTCCCGCGAGTGCCAG
GCTAGCCCCGCCGAGGGTTTCGGTGCTGCTGCTGGTGGTGGCCAGGAGTG
CTACAAGTGCGGCCGTGTCGGTCACATTGCTAGGAATTGCCCTCAGAGCG
GCGGCTACAGTGGTGGCTTTGGCGGTCGTCAGCAGACTTGCTACTCTTGC
GGTGGTTTCGGACACATGGCTCGCGACTGCACCAATGGTCAGAAGTGCTA
CAACTGTAGGTTACCGCTCCCTTCACAATCCCTCAGGTTCAGACACGCTA
ACAATATGCTTCTAGGCGGTGAGGTTGGCCACGTCTCTCGCGACTGCCCT
ACGGAGGCCAAGGGCGAGCGGGTGTGCTACAACTGCAAGCAGCCTGGCCA
CGTCCAGGCCGCTTGCCCTAACTAA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:2406953..2408277+

>CAN33_3780-T1 ID=CAN33_3780-T1|Name=CAN33_3780-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1296bp|location=Sequence derived from alignment at NKJJ01000004.1:2406953..2408277+ (Aspergillus niger FDAARGOS_311)
ATGAGTTTCCAAGCTGGAGGTCGTGGCTGCTTCAACTGCCGTGAATGCAC
TGTAGCTCCCAAGGAGAAGTCCTGCTACCGCTGCGGTGGTGTGGGCCACA
TCTCCCGCGAGTGCCAGGCTAGCCCCGCCGAGGGTTTCGGTGCTGCTGCT
GGTGGTGGCCAGGAGTGCTACAAGTGCGGCCGTGTCGGTCACATTGCTAG
GAATTGCCCTCAGAGCGGCGGCTACAGTGGTGGCTTTGGCGGTCGTCAGC
AGACTTGCTACTCTTGCGGTGGTTTCGGACACATGGCTCGCGACTGCACC
AATGGTCAGAAGTGCTACAACTGCGGTGAGGTTGGCCACGTCTCTCGCGA
CTGCCCTACGGAGGCCAAGGGCGAGCGGGTGTGCTACAACTGCAAGCAGC
CTGGCCACGTCCAGGCCGCTTGCCCTAACTAAATGAGTTTCCAAGCTGGA
GGTCGTGGCTGCTTCAACTGCCGTGAATGCACTGTAGCTCCCAAGGAGAA
GTCCTGCTACCGCTGCGGTGGTGTGGGCCACATCTCCCGCGAGTGCCAGG
CTAGCCCCGCCGAGGGTTTCGGTGCTGCTGCTGGTGGTGGCCAGGAGTGC
TACAAGTGCGGCCGTGTCGGTCACATTGCTAGGAATTGCCCTCAGAGCGG
CGGCTACAGTGGTGGCTTTGGCGGTCGTCAGCAGACTTGCTACTCTTGCG
GTGGTTTCGGACACATGGCTCGCGACTGCACCAATGGTCAGAAGTGCTAC
AACTGCGGTGAGGTTGGCCACGTCTCTCGCGACTGCCCTACGGAGGCCAA
GGGCGAGCGGGTGTGCTACAACTGCAAGCAGCCTGGCCACGTCCAGGCCG
CTTGCCCTAACTAAATGAGTTTCCAAGCTGGAGGTCGTGGCTGCTTCAAC
TGCCGTGAATGCACTGTAGCTCCCAAGGAGAAGTCCTGCTACCGCTGCGG
TGGTGTGGGCCACATCTCCCGCGAGTGCCAGGCTAGCCCCGCCGAGGGTT
TCGGTGCTGCTGCTGGTGGTGGCCAGGAGTGCTACAAGTGCGGCCGTGTC
GGTCACATTGCTAGGAATTGCCCTCAGAGCGGCGGCTACAGTGGTGGCTT
TGGCGGTCGTCAGCAGACTTGCTACTCTTGCGGTGGTTTCGGACACATGG
CTCGCGACTGCACCAATGGTCAGAAGTGCTACAACTGCGGTGAGGTTGGC
CACGTCTCTCGCGACTGCCCTACGGAGGCCAAGGGCGAGCGGGTGTGCTA
CAACTGCAAGCAGCCTGGCCACGTCCAGGCCGCTTGCCCTAACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_3780CAN33_3780Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3780-T1.exon1CAN33_3780-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_3780-T1.exon2CAN33_3780-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_3780-T1.exon3CAN33_3780-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3780-T1.cdsCAN33_3780-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3780-T1CAN33_3780-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036875
DBxrefInterPro:IPR001878
DBxrefPFAM:PF00098
ProductZinc knuckle family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:2406953..2408277 +
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