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CAN33_37815-T1, CAN33_37815-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_37815-T1
Unique NameCAN33_37815-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1067949..1068801-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_37815-T1 ID=CAN33_37815-T1|Name=CAN33_37815-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=853bp|location=Sequence derived from alignment at NKJJ01000017.1:1067949..1068801- (Aspergillus niger FDAARGOS_311)
ATGTATACCCAGCGACCGTTGGCGTATGCCCCTACGCCGTATAGCTATAC
GCCCAACCCAGCGTTGGCGGCGTCTATCAACCTTGATGAAGTGAGTCGTC
TGGAGGTTGGAGAGTGGTGCTAGATTAGGACTGACTGTTGCGGCAGGAAG
TAAAACTAGCCTCCAGCGCTGCGGAGCGGGATCTCTACGAGTCGTTGGCT
GAAATCTACGGCATCATCGTCACTCTGGATGGCCTGGAGAAAGCTTATAT
CAAAGATGTGGTTACGGAAGCAGAGTACACGGAGACATGTACCCGGCTCT
TGAAGCAGTACAAGTCCAGTTTGGGTGATGAAACTGTTGCAAATGAGTTC
GTCGATCTAGAGACCTTCAAACGCACCTGGGAGGTGAGTATTACTATCGT
GTGCTTACAGTAAGACGATAGCTGATCACCTGGTTTTCTTTTGTGTAGCT
GGAATGCCCTCGCGCCACCGAACGTCTCCGCATTGGCCTCCCCGCGACAG
TCGAACAAGCCTCCCACAGCACACCCGCCGCGAACATGGCTCCAGCAGCT
GCAGGCCCTGCAGGAGCATCTGGTAGTCTGATATTGACGGCTACTGAGAA
TTTCATCACCTTCTTGGATGCGCTGAAGCTGAACATGGTGTCCAAGGACG
CACTGCACCCGCTTTTGTCGGAAGTGATCCAATCCGTCAATAAAGTCACC
GATGTCGATTTCGAGAACCGGGGCAAGATCATCCAATGGCTGATCACCTT
GAATCAGATGCGTGCAACCGAGGAACTCGGTGAAGACCAGGCTCGGGAGT
TGGCGTTCGACATTGAACAAGCATACCTGGGATTCAAGGCCACTTTGGGT
TGA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1067949..1068801-

>CAN33_37815-T1 ID=CAN33_37815-T1|Name=CAN33_37815-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2196bp|location=Sequence derived from alignment at NKJJ01000017.1:1067949..1068801- (Aspergillus niger FDAARGOS_311)
CTGGAATGCCCTCGCGCCACCGAACGTCTCCGCATTGGCCTCCCCGCGAC
AGTCGAACAAGCCTCCCACAGCACACCCGCCGCGAACATGGCTCCAGCAG
CTGCAGGCCCTGCAGGAGCATCTGGTAGTCTGATATTGACGGCTACTGAG
AATTTCATCACCTTCTTGGATGCGCTGAAGCTGAACATGGTGTCCAAGGA
CGCACTGCACCCGCTTTTGTCGGAAGTGATCCAATCCGTCAATAAAGTCA
CCGATGTCGATTTCGAGAACCGGGGCAAGATCATCCAATGGCTGATCACC
TTGAATCAGATGCGTGCAACCGAGGAACTCGGTGAAGACCAGGCTCGGGA
GTTGGCGTTCGACATTGAACAAGCATACCTGGGATTCAAGGCCACTTTGG
GTTGAGAAGTAAAACTAGCCTCCAGCGCTGCGGAGCGGGATCTCTACGAG
TCGTTGGCTGAAATCTACGGCATCATCGTCACTCTGGATGGCCTGGAGAA
AGCTTATATCAAAGATGTGGTTACGGAAGCAGAGTACACGGAGACATGTA
CCCGGCTCTTGAAGCAGTACAAGTCCAGTTTGGGTGATGAAACTGTTGCA
AATGAGTTCGTCGATCTAGAGACCTTCAAACGCACCTGGGAGATGTATAC
CCAGCGACCGTTGGCGTATGCCCCTACGCCGTATAGCTATACGCCCAACC
CAGCGTTGGCGGCGTCTATCAACCTTGATGAACTGGAATGCCCTCGCGCC
ACCGAACGTCTCCGCATTGGCCTCCCCGCGACAGTCGAACAAGCCTCCCA
CAGCACACCCGCCGCGAACATGGCTCCAGCAGCTGCAGGCCCTGCAGGAG
CATCTGGTAGTCTGATATTGACGGCTACTGAGAATTTCATCACCTTCTTG
GATGCGCTGAAGCTGAACATGGTGTCCAAGGACGCACTGCACCCGCTTTT
GTCGGAAGTGATCCAATCCGTCAATAAAGTCACCGATGTCGATTTCGAGA
ACCGGGGCAAGATCATCCAATGGCTGATCACCTTGAATCAGATGCGTGCA
ACCGAGGAACTCGGTGAAGACCAGGCTCGGGAGTTGGCGTTCGACATTGA
ACAAGCATACCTGGGATTCAAGGCCACTTTGGGTTGAGAAGTAAAACTAG
CCTCCAGCGCTGCGGAGCGGGATCTCTACGAGTCGTTGGCTGAAATCTAC
GGCATCATCGTCACTCTGGATGGCCTGGAGAAAGCTTATATCAAAGATGT
GGTTACGGAAGCAGAGTACACGGAGACATGTACCCGGCTCTTGAAGCAGT
ACAAGTCCAGTTTGGGTGATGAAACTGTTGCAAATGAGTTCGTCGATCTA
GAGACCTTCAAACGCACCTGGGAGATGTATACCCAGCGACCGTTGGCGTA
TGCCCCTACGCCGTATAGCTATACGCCCAACCCAGCGTTGGCGGCGTCTA
TCAACCTTGATGAACTGGAATGCCCTCGCGCCACCGAACGTCTCCGCATT
GGCCTCCCCGCGACAGTCGAACAAGCCTCCCACAGCACACCCGCCGCGAA
CATGGCTCCAGCAGCTGCAGGCCCTGCAGGAGCATCTGGTAGTCTGATAT
TGACGGCTACTGAGAATTTCATCACCTTCTTGGATGCGCTGAAGCTGAAC
ATGGTGTCCAAGGACGCACTGCACCCGCTTTTGTCGGAAGTGATCCAATC
CGTCAATAAAGTCACCGATGTCGATTTCGAGAACCGGGGCAAGATCATCC
AATGGCTGATCACCTTGAATCAGATGCGTGCAACCGAGGAACTCGGTGAA
GACCAGGCTCGGGAGTTGGCGTTCGACATTGAACAAGCATACCTGGGATT
CAAGGCCACTTTGGGTTGAGAAGTAAAACTAGCCTCCAGCGCTGCGGAGC
GGGATCTCTACGAGTCGTTGGCTGAAATCTACGGCATCATCGTCACTCTG
GATGGCCTGGAGAAAGCTTATATCAAAGATGTGGTTACGGAAGCAGAGTA
CACGGAGACATGTACCCGGCTCTTGAAGCAGTACAAGTCCAGTTTGGGTG
ATGAAACTGTTGCAAATGAGTTCGTCGATCTAGAGACCTTCAAACGCACC
TGGGAGATGTATACCCAGCGACCGTTGGCGTATGCCCCTACGCCGTATAG
CTATACGCCCAACCCAGCGTTGGCGGCGTCTATCAACCTTGATGAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000813ESCRT I complex
Vocabulary: Biological Process
TermDefinition
GO:0032509endosome transport via multivesicular body sorting pathway
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_37815CAN33_37815Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37815-T1CAN33_37815-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37815-T1.cdsCAN33_37815-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37815-T1.exon3CAN33_37815-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_37815-T1.exon2CAN33_37815-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_37815-T1.exon1CAN33_37815-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR037202
DBxrefInterPro:IPR017899
DBxrefInterPro:IPR017898
DBxrefInterPro:IPR038358
DBxrefInterPro:IPR007143
DBxrefInterPro:IPR037206
DBxrefPFAM:PF03997
ProductVPS28 protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1067949..1068801 -
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