You are here

Home

CAN33_37885-T1, CAN33_37885-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_37885-T1
Unique NameCAN33_37885-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1106727..1107240-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_37885-T1 ID=CAN33_37885-T1|Name=CAN33_37885-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=514bp|location=Sequence derived from alignment at NKJJ01000017.1:1106727..1107240- (Aspergillus niger FDAARGOS_311)
ATGGCTTCAGAACCATCGACAGAGACACAGCGGGGAGTTTACGATGTCCC
GGAGCAGGACTACGAGCGTAGCTCGACTCCTCGGCCAGATGCTCAATCGA
GAACCCCAACGCCTACTTCCTTTGAGGTCGCGGATAAGCCTGTTGATTCA
GGCTCACGGAAGCCGGAGCCCGTGGAGAATAGACTTCGTCCTGCAGCAGG
TATATGAGAAGACTCGTTTTTTGGCAGTGTTGCTAATTAATATCAAAGAC
ATAATCAACCGTATTATCTGGGACCCTGCCTTTGATGGGACCAATTACGT
CATTGGGTATGAAGACCGATTCGAAGGCCGTCTGGAGTCTGGCTTCAACG
CGTGGAAGAAAGAGACAACCGACGAGGAATTCATTCCTCAGCACCGGATC
CTCTATATCAAACGTCGGTCGGATGGAGAGATCGTGTGGGACAGGAGACG
GAGAATCGACAAGATATTTTATAGCGGAAACTCTGCTTTCGACTATCTCG
GGTTTCTGGCTTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:1106727..1107240-

>CAN33_37885-T1 ID=CAN33_37885-T1|Name=CAN33_37885-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=930bp|location=Sequence derived from alignment at NKJJ01000017.1:1106727..1107240- (Aspergillus niger FDAARGOS_311)
ACATAATCAACCGTATTATCTGGGACCCTGCCTTTGATGGGACCAATTAC
GTCATTGGGTATGAAGACCGATTCGAAGGCCGTCTGGAGTCTGGCTTCAA
CGCGTGGAAGAAAGAGACAACCGACGAGGAATTCATTCCTCAGCACCGGA
TCCTCTATATCAAACGTCGGTCGGATGGAGAGATCGTGTGGGACAGGAGA
CGGAGAATCGACAAGATATTTTATAGCGGAAACTCTGCTTTCGACTATCT
CGGGTTTCTGGCTTGAATGGCTTCAGAACCATCGACAGAGACACAGCGGG
GAGTTTACGATGTCCCGGAGCAGGACTACGAGCGTAGCTCGACTCCTCGG
CCAGATGCTCAATCGAGAACCCCAACGCCTACTTCCTTTGAGGTCGCGGA
TAAGCCTGTTGATTCAGGCTCACGGAAGCCGGAGCCCGTGGAGAATAGAC
TTCGTCCTGCAGCAGACATAATCAACCGTATTATCTGGGACCCTGCCTTT
GATGGGACCAATTACGTCATTGGGTATGAAGACCGATTCGAAGGCCGTCT
GGAGTCTGGCTTCAACGCGTGGAAGAAAGAGACAACCGACGAGGAATTCA
TTCCTCAGCACCGGATCCTCTATATCAAACGTCGGTCGGATGGAGAGATC
GTGTGGGACAGGAGACGGAGAATCGACAAGATATTTTATAGCGGAAACTC
TGCTTTCGACTATCTCGGGTTTCTGGCTTGAATGGCTTCAGAACCATCGA
CAGAGACACAGCGGGGAGTTTACGATGTCCCGGAGCAGGACTACGAGCGT
AGCTCGACTCCTCGGCCAGATGCTCAATCGAGAACCCCAACGCCTACTTC
CTTTGAGGTCGCGGATAAGCCTGTTGATTCAGGCTCACGGAAGCCGGAGC
CCGTGGAGAATAGACTTCGTCCTGCAGCAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_37885CAN33_37885Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37885-T1CAN33_37885-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37885-T1.cdsCAN33_37885-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37885-T1.exon2CAN33_37885-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_37885-T1.exon1CAN33_37885-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR040459
DBxrefPFAM:PF04457
ProductProtein of unknown function (DUF504) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1106727..1107240 -
Powered by Drupal