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CAN33_37930-T1, CAN33_37930-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_37930-T1
Unique NameCAN33_37930-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1132790..1134049-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_37930-T1 ID=CAN33_37930-T1|Name=CAN33_37930-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1260bp|location=Sequence derived from alignment at NKJJ01000017.1:1132790..1134049- (Aspergillus niger FDAARGOS_311)
ATGTCCGATCGCCTGACCATCGAAGTCGACTGTACCTCCTTGGGTTCCAA
CGAGTGCCCCTCCATGGCTTCCAGCTTCTCACCCATGGAATCACCTACGC
CTACTCCAACAAGTGTGTACAGCCAAGGCTCTTTGGCTTCGCCCACCTGG
CACGAAGGGGGCTCGTATCCGGGACAAGGCTATGAAAGGCATACCGGAAC
GACGCCAATGCGCAGTGCCTTTCGACTGGCCAGCATGACATCCAACGATA
GTATGGGCATGTCCTATGGGCAAATGGAGGCACAAGAGCGGATGCCAATG
ACCGACTTTCTCTCAGGATATGATGAGAACGTTGAACATTTCTGGATCCC
CCAAGAGGCACAGAAAGCCTATGAACATGGCGTCCCTGGACTCCCATACC
CTCAGGCAATGCCTCAGTATTCCACTATGGGCCGTAGCAGCTATCGACAA
CACGCTGCACCCTACCTGCCCGATTCCGCAACCAACCCCTGTCTGTCGCG
GTCGATTTTCCATCAGCCTGAAAGGGTTCCCAACTCAATGTCTATGGGCA
ATGTGATACCTTGGATGGCCCCGCAGCCAGACTCAATTGCCCCGCAAACT
ATTGCCCCGTCGCAGGTTGCCCCAGTCACCCCCCCGCCGTCATACTCGGA
ATTTTCAGGCTCAATCAATACCTTCAAGACGCACAGCCCGACCACTCCAG
TGCGTTCCTGCTCATTGGGGACTACCTCTGGGACCGATACACCCATGAGC
CGCCTCTCAGGCGGCATGGACTACCTGGATGACTTCAACCAATCGCCAGT
TTATCGCGACAATCTCGCCCGAGTCCAGCGCCAGCCCTCCAGGAAAGTTG
CTCGGAAGCAGTCGTCAAAGCAGAGCCTGAGCTTGGAAAACCTTCCGTCC
ATCATCAAGCAAGTCCAATTTAAGTGCAAGGAGCCTGGTTGCAAGGGTCG
CTTCAAGAGACAAGAGCATCTGAAGCGGCACATGAAGAGCCACTCTAAGG
AAAAGCCGCATGTATGCTGGGTTCCTGGCTGCGAACGGGCTTTCTCGCGC
AGTGACAACCTGAACGCGCATTACACGAAGACCCACAGCAAGCGCGGCGG
CCGTAATCGCTATGTCGCGACGCTAGACGAGAACAGCCCAGACTACAACC
CCGAATACCGCGGCCAATTAACCGCTGATGGGCGACCAGTCTACAACTCC
AAGTCCCAAGATCTCATGCCCGATGCTCGTGAGACGAGCGAGGAGGCGTG
GTTGGAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1132790..1134049-

>CAN33_37930-T1 ID=CAN33_37930-T1|Name=CAN33_37930-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1260bp|location=Sequence derived from alignment at NKJJ01000017.1:1132790..1134049- (Aspergillus niger FDAARGOS_311)
ATGTCCGATCGCCTGACCATCGAAGTCGACTGTACCTCCTTGGGTTCCAA
CGAGTGCCCCTCCATGGCTTCCAGCTTCTCACCCATGGAATCACCTACGC
CTACTCCAACAAGTGTGTACAGCCAAGGCTCTTTGGCTTCGCCCACCTGG
CACGAAGGGGGCTCGTATCCGGGACAAGGCTATGAAAGGCATACCGGAAC
GACGCCAATGCGCAGTGCCTTTCGACTGGCCAGCATGACATCCAACGATA
GTATGGGCATGTCCTATGGGCAAATGGAGGCACAAGAGCGGATGCCAATG
ACCGACTTTCTCTCAGGATATGATGAGAACGTTGAACATTTCTGGATCCC
CCAAGAGGCACAGAAAGCCTATGAACATGGCGTCCCTGGACTCCCATACC
CTCAGGCAATGCCTCAGTATTCCACTATGGGCCGTAGCAGCTATCGACAA
CACGCTGCACCCTACCTGCCCGATTCCGCAACCAACCCCTGTCTGTCGCG
GTCGATTTTCCATCAGCCTGAAAGGGTTCCCAACTCAATGTCTATGGGCA
ATGTGATACCTTGGATGGCCCCGCAGCCAGACTCAATTGCCCCGCAAACT
ATTGCCCCGTCGCAGGTTGCCCCAGTCACCCCCCCGCCGTCATACTCGGA
ATTTTCAGGCTCAATCAATACCTTCAAGACGCACAGCCCGACCACTCCAG
TGCGTTCCTGCTCATTGGGGACTACCTCTGGGACCGATACACCCATGAGC
CGCCTCTCAGGCGGCATGGACTACCTGGATGACTTCAACCAATCGCCAGT
TTATCGCGACAATCTCGCCCGAGTCCAGCGCCAGCCCTCCAGGAAAGTTG
CTCGGAAGCAGTCGTCAAAGCAGAGCCTGAGCTTGGAAAACCTTCCGTCC
ATCATCAAGCAAGTCCAATTTAAGTGCAAGGAGCCTGGTTGCAAGGGTCG
CTTCAAGAGACAAGAGCATCTGAAGCGGCACATGAAGAGCCACTCTAAGG
AAAAGCCGCATGTATGCTGGGTTCCTGGCTGCGAACGGGCTTTCTCGCGC
AGTGACAACCTGAACGCGCATTACACGAAGACCCACAGCAAGCGCGGCGG
CCGTAATCGCTATGTCGCGACGCTAGACGAGAACAGCCCAGACTACAACC
CCGAATACCGCGGCCAATTAACCGCTGATGGGCGACCAGTCTACAACTCC
AAGTCCCAAGATCTCATGCCCGATGCTCGTGAGACGAGCGAGGAGGCGTG
GTTGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_37930CAN33_37930Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37930-T1.cdsCAN33_37930-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37930-T1.exon1CAN33_37930-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37930-T1CAN33_37930-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF00096
ProductZinc finger C2H2 type family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1132790..1134049 -
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