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CAN33_3800-T1, CAN33_3800-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_3800-T1
Unique NameCAN33_3800-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:2417054..2419391-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_3800-T1 ID=CAN33_3800-T1|Name=CAN33_3800-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2338bp|location=Sequence derived from alignment at NKJJ01000004.1:2417054..2419391- (Aspergillus niger FDAARGOS_311)
ATGTTCTCCGAATGTATGATTATCACTCTGCTGTCCGTCTCTTATAAATT
GACCAAGCTTTTCATCGCTCACTGTCTGCCCAGATGCCTCCCGTTTCCTC
GCACAGTCCCAGTCACGGGTTGTGAACCATCCAGAAGACCCCCGAAGAAA
GGGACATGAACGTCTCTTGCAACAACCTCGGAATTCTCTTTTGCCCTCCT
CGCGCTCATTCTTCCACAGGAATGCGGCCGACCCATATCAACCTGCCGGT
TCTCAACTATCAAGCTTCCCTTTTAGTTCGAGGGTTGTGTCTCAGCCTGC
GCCTCTCTTCTACAGCGCTACTGACGAATTTCGAGAGGAGGATGATGAGG
TTGAGCATGAGCGAGAGATTGCCGACTTCTATGCCTTACAAAAATCACGG
CGTCAATTTGGGAGCAGCTACCTTAGGGAGTCTTCAGAGATTGGCGACGA
TAACGACTCTGCCAGCTCGAAGGAACAAAAGCCTCCCTATACTAGGGGGA
AGGGCATTTGGAGCTCCTGGCGCGACGCCGAAACTAGCGACAGAGCGCAA
GAGTTGCGTGCTGAATACGACGGGGAGCCACGCGGAACGGGAGATTCGGT
TCAAGCAGAGCGAAACAGAAGCAGGCTCAGGGGAAACCTAGTTGACGTTC
AACTGGAAGATACACTGGCATCCGATGTTGGCCGCGACCGGGCTGACTCT
CCCGTATTTGGTGATGATAAACCGCCCTCCATTCAACGGTTTCGAGAGCA
GCCACAGTCACGAACGGGCAATCTCGGAATAGACTCAGTCCTCTTGCCTA
TAGATTCAGATAACGCAGTATTGCCAGAAACATCCCAACCGCCAGGCATG
TCACGGCCATACCGAATGTCGACTCCACCGATAGGCGCTAGCTCTCCAAC
TCATGATGCCTTCTGGGGTCAGTTATTTCTCATATCCGTGGCCTCTCTCT
TCGCTACGTCATTTCTTGTCTACCTCCACACTTCACCTCCTTCTGGTGAC
AAGTCGAAATGGGGTGACACGGTCTACTTGACCATCCACAGTTCATTTTA
CCTGCTGGGTACCTATACTGTCGCGTCGATATTCATATCTCTGCTCTGGC
TGGCATTATTACGTTCCTACGTACGTCCATTGGTCTACGCTGTCATCATC
GCCGTTCCCATAATCCTGTATTCCTTCTTTCTCTACCCCTTTATCTCGAG
TTTTGGAGGTACGTGGCACGGATCGAGTGTTCAGGACAAAGTCATGAGAT
GCGGGTCTATTGTTCCGTTTGTTTTGGCCAGTGCATGGATTTATAATGTC
GTTCGAGGTCGCCACGCTATAGGGAGGGCCGTCGACATACTCGAATTTGC
ATGCCGCATCCTCGCCGTGAATCCAGAGCTTCTAGCTTTGGGGCTTGGTG
CCCTCGTTCTCATTGTCTTATGGACCTGGCTATGGATGCTCATATTTACG
CGAGTGTTTTTGGAAGGTCATCTTTCTCGGTCCAGCCTTTTTGTTGTCGA
TTCAAGCGGCTGGTGCTTAGGAGTCTACTATGTGCTCGTTTACGCATGGT
CACTGGGAGTCATCGCTGGTATTCGACGTACAGTCACAGCTGCCGCCGTG
AGCCAGTGGTATTTTCACCGCTATACGATGCCGGCGCCGACGTCCAGGCA
AATAGTCCAGGCCGCAACTCTGCACTCCGTTACAACCCTTTTTGGTACAA
TTTGCCTATCGAGCCTCCTGGCTTTAATGATCCGCGTCCCGCTTTTGTTG
CTTCCCGGTCGCATCGCCTCCCTTTTGAGTTTCTGCGCCTATTCGTTTGT
CCCAACTCCTATAACTGCCCTTACGGACCCTCTTACCCTCACATATGCTT
CCATTCATTCCCAGCCGCTTACAGTGTCCGCTCGTGGCCTGGTGCAGATG
ACAAACCTGACGCCCTCCATAGCGACGACTTCTTTACACCCACGGTCGTT
CTCTTGGTCTCGTGAGCATTCTGGAGCTCTTCTCCCTTACCGACTTTCCA
AGCTCATCCTGCATGCTGCTCGTCTCATGATGTCTCTTGCGCTTGGGTTT
GGTGGCTGGGTGAGCACTGCCCGGAGCCTAAGTGTGATGGGTACCAACGG
TTCAATCCGTGGAAGCATGTATGCCTATATGGTTGGGTTCATTGCTGGGA
CGATTGGTTGGAGTGTGTTGGGAGCAATTGAAGGTGTGATTGCAGATATT
GTCGATGCATCAATCATTTGTTGGAGTAGCGAAGTTGGAGCCTACGGGCG
AGAGGCAAGGTACTGTCGGGAAGCTGGCTGGCTCTTCGGCCAAGAGTCTG
GTTCTGTTTCCAGGAATACGCGCTTTGAGGATGCATGA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:2417054..2419391-

>CAN33_3800-T1 ID=CAN33_3800-T1|Name=CAN33_3800-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4536bp|location=Sequence derived from alignment at NKJJ01000004.1:2417054..2419391- (Aspergillus niger FDAARGOS_311)
ATGCCTCCCGTTTCCTCGCACAGTCCCAGTCACGGGTTGTGAACCATCCA
GAAGACCCCCGAAGAAAGGGACATGAACGTCTCTTGCAACAACCTCGGAA
TTCTCTTTTGCCCTCCTCGCGCTCATTCTTCCACAGGAATGCGGCCGACC
CATATCAACCTGCCGGTTCTCAACTATCAAGCTTCCCTTTTAGTTCGAGG
GTTGTGTCTCAGCCTGCGCCTCTCTTCTACAGCGCTACTGACGAATTTCG
AGAGGAGGATGATGAGGTTGAGCATGAGCGAGAGATTGCCGACTTCTATG
CCTTACAAAAATCACGGCGTCAATTTGGGAGCAGCTACCTTAGGGAGTCT
TCAGAGATTGGCGACGATAACGACTCTGCCAGCTCGAAGGAACAAAAGCC
TCCCTATACTAGGGGGAAGGGCATTTGGAGCTCCTGGCGCGACGCCGAAA
CTAGCGACAGAGCGCAAGAGTTGCGTGCTGAATACGACGGGGAGCCACGC
GGAACGGGAGATTCGGTTCAAGCAGAGCGAAACAGAAGCAGGCTCAGGGG
AAACCTAGTTGACGTTCAACTGGAAGATACACTGGCATCCGATGTTGGCC
GCGACCGGGCTGACTCTCCCGTATTTGGTGATGATAAACCGCCCTCCATT
CAACGGTTTCGAGAGCAGCCACAGTCACGAACGGGCAATCTCGGAATAGA
CTCAGTCCTCTTGCCTATAGATTCAGATAACGCAGTATTGCCAGAAACAT
CCCAACCGCCAGGCATGTCACGGCCATACCGAATGTCGACTCCACCGATA
GGCGCTAGCTCTCCAACTCATGATGCCTTCTGGGGTCAGTTATTTCTCAT
ATCCGTGGCCTCTCTCTTCGCTACGTCATTTCTTGTCTACCTCCACACTT
CACCTCCTTCTGGTGACAAGTCGAAATGGGGTGACACGGTCTACTTGACC
ATCCACAGTTCATTTTACCTGCTGGGTACCTATACTGTCGCGTCGATATT
CATATCTCTGCTCTGGCTGGCATTATTACGTTCCTACGTACGTCCATTGG
TCTACGCTGTCATCATCGCCGTTCCCATAATCCTGTATTCCTTCTTTCTC
TACCCCTTTATCTCGAGTTTTGGAGGTACGTGGCACGGATCGAGTGTTCA
GGACAAAGTCATGAGATGCGGGTCTATTGTTCCGTTTGTTTTGGCCAGTG
CATGGATTTATAATGTCGTTCGAGGTCGCCACGCTATAGGGAGGGCCGTC
GACATACTCGAATTTGCATGCCGCATCCTCGCCGTGAATCCAGAGCTTCT
AGCTTTGGGGCTTGGTGCCCTCGTTCTCATTGTCTTATGGACCTGGCTAT
GGATGCTCATATTTACGCGAGTGTTTTTGGAAGGTCATCTTTCTCGGTCC
AGCCTTTTTGTTGTCGATTCAAGCGGCTGGTGCTTAGGAGTCTACTATGT
GCTCGTTTACGCATGGTCACTGGGAGTCATCGCTGGTATTCGACGTACAG
TCACAGCTGCCGCCGTGAGCCAGTGGTATTTTCACCGCTATACGATGCCG
GCGCCGACGTCCAGGCAAATAGTCCAGGCCGCAACTCTGCACTCCGTTAC
AACCCTTTTTGGTACAATTTGCCTATCGAGCCTCCTGGCTTTAATGATCC
GCGTCCCGCTTTTGTTGCTTCCCGGTCGCATCGCCTCCCTTTTGAGTTTC
TGCGCCTATTCGTTTGTCCCAACTCCTATAACTGCCCTTACGGACCCTCT
TACCCTCACATATGCTTCCATTCATTCCCAGCCGCTTACAGTGTCCGCTC
GTGGCCTGGTGCAGATGACAAACCTGACGCCCTCCATAGCGACGACTTCT
TTACACCCACGGTCGTTCTCTTGGTCTCGTGAGCATTCTGGAGCTCTTCT
CCCTTACCGACTTTCCAAGCTCATCCTGCATGCTGCTCGTCTCATGATGT
CTCTTGCGCTTGGGTTTGGTGGCTGGGTGAGCACTGCCCGGAGCCTAAGT
GTGATGGGTACCAACGGTTCAATCCGTGGAAGCATGTATGCCTATATGGT
TGGGTTCATTGCTGGGACGATTGGTTGGAGTGTGTTGGGAGCAATTGAAG
GTGTGATTGCAGATATTGTCGATGCATCAATCATTTGTTGGAGTAGCGAA
GTTGGAGCCTACGGGCGAGAGGCAAGGTACTGTCGGGAAGCTGGCTGGCT
CTTCGGCCAAGAGTCTGGTTCTGTTTCCAGGAATACGCGCTTTGAGGATG
CATGAATGTTCTCCGAATATGCCTCCCGTTTCCTCGCACAGTCCCAGTCA
CGGGTTGTGAACCATCCAGAAGACCCCCGAAGAAAGGGACATGAACGTCT
CTTGCAACAACCTCGGAATTCTCTTTTGCCCTCCTCGCGCTCATTCTTCC
ACAGGAATGCGGCCGACCCATATCAACCTGCCGGTTCTCAACTATCAAGC
TTCCCTTTTAGTTCGAGGGTTGTGTCTCAGCCTGCGCCTCTCTTCTACAG
CGCTACTGACGAATTTCGAGAGGAGGATGATGAGGTTGAGCATGAGCGAG
AGATTGCCGACTTCTATGCCTTACAAAAATCACGGCGTCAATTTGGGAGC
AGCTACCTTAGGGAGTCTTCAGAGATTGGCGACGATAACGACTCTGCCAG
CTCGAAGGAACAAAAGCCTCCCTATACTAGGGGGAAGGGCATTTGGAGCT
CCTGGCGCGACGCCGAAACTAGCGACAGAGCGCAAGAGTTGCGTGCTGAA
TACGACGGGGAGCCACGCGGAACGGGAGATTCGGTTCAAGCAGAGCGAAA
CAGAAGCAGGCTCAGGGGAAACCTAGTTGACGTTCAACTGGAAGATACAC
TGGCATCCGATGTTGGCCGCGACCGGGCTGACTCTCCCGTATTTGGTGAT
GATAAACCGCCCTCCATTCAACGGTTTCGAGAGCAGCCACAGTCACGAAC
GGGCAATCTCGGAATAGACTCAGTCCTCTTGCCTATAGATTCAGATAACG
CAGTATTGCCAGAAACATCCCAACCGCCAGGCATGTCACGGCCATACCGA
ATGTCGACTCCACCGATAGGCGCTAGCTCTCCAACTCATGATGCCTTCTG
GGGTCAGTTATTTCTCATATCCGTGGCCTCTCTCTTCGCTACGTCATTTC
TTGTCTACCTCCACACTTCACCTCCTTCTGGTGACAAGTCGAAATGGGGT
GACACGGTCTACTTGACCATCCACAGTTCATTTTACCTGCTGGGTACCTA
TACTGTCGCGTCGATATTCATATCTCTGCTCTGGCTGGCATTATTACGTT
CCTACGTACGTCCATTGGTCTACGCTGTCATCATCGCCGTTCCCATAATC
CTGTATTCCTTCTTTCTCTACCCCTTTATCTCGAGTTTTGGAGGTACGTG
GCACGGATCGAGTGTTCAGGACAAAGTCATGAGATGCGGGTCTATTGTTC
CGTTTGTTTTGGCCAGTGCATGGATTTATAATGTCGTTCGAGGTCGCCAC
GCTATAGGGAGGGCCGTCGACATACTCGAATTTGCATGCCGCATCCTCGC
CGTGAATCCAGAGCTTCTAGCTTTGGGGCTTGGTGCCCTCGTTCTCATTG
TCTTATGGACCTGGCTATGGATGCTCATATTTACGCGAGTGTTTTTGGAA
GGTCATCTTTCTCGGTCCAGCCTTTTTGTTGTCGATTCAAGCGGCTGGTG
CTTAGGAGTCTACTATGTGCTCGTTTACGCATGGTCACTGGGAGTCATCG
CTGGTATTCGACGTACAGTCACAGCTGCCGCCGTGAGCCAGTGGTATTTT
CACCGCTATACGATGCCGGCGCCGACGTCCAGGCAAATAGTCCAGGCCGC
AACTCTGCACTCCGTTACAACCCTTTTTGGTACAATTTGCCTATCGAGCC
TCCTGGCTTTAATGATCCGCGTCCCGCTTTTGTTGCTTCCCGGTCGCATC
GCCTCCCTTTTGAGTTTCTGCGCCTATTCGTTTGTCCCAACTCCTATAAC
TGCCCTTACGGACCCTCTTACCCTCACATATGCTTCCATTCATTCCCAGC
CGCTTACAGTGTCCGCTCGTGGCCTGGTGCAGATGACAAACCTGACGCCC
TCCATAGCGACGACTTCTTTACACCCACGGTCGTTCTCTTGGTCTCGTGA
GCATTCTGGAGCTCTTCTCCCTTACCGACTTTCCAAGCTCATCCTGCATG
CTGCTCGTCTCATGATGTCTCTTGCGCTTGGGTTTGGTGGCTGGGTGAGC
ACTGCCCGGAGCCTAAGTGTGATGGGTACCAACGGTTCAATCCGTGGAAG
CATGTATGCCTATATGGTTGGGTTCATTGCTGGGACGATTGGTTGGAGTG
TGTTGGGAGCAATTGAAGGTGTGATTGCAGATATTGTCGATGCATCAATC
ATTTGTTGGAGTAGCGAAGTTGGAGCCTACGGGCGAGAGGCAAGGTACTG
TCGGGAAGCTGGCTGGCTCTTCGGCCAAGAGTCTGGTTCTGTTTCCAGGA
ATACGCGCTTTGAGGATGCATGAATGTTCTCCGAAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_3800CAN33_3800Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3800-T1CAN33_3800-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3800-T1.cdsCAN33_3800-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3800-T1.exon2CAN33_3800-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_3800-T1.exon1CAN33_3800-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR007603
DBxrefPFAM:PF04515
ProductPlasma-membrane choline transporter family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:2417054..2419391 -
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