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CAN33_38050-T1, CAN33_38050-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_38050-T1
Unique NameCAN33_38050-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1233855..1234839+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_38050-T1 ID=CAN33_38050-T1|Name=CAN33_38050-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=985bp|location=Sequence derived from alignment at NKJJ01000017.1:1233855..1234839+ (Aspergillus niger FDAARGOS_311)
ATGTCACGACACGCCCAAGTGGAGGAGGTGTATGACTCCGACCCGGAGGA
AGTTGCTCCCTCCGATTCCTCGCCCGCCAACTTTGCCAATGAGTCCCTCC
TTTCTGGAGCCGGAGTACCTATGTCTGGCTCAGTACCCATGAGACCCGCT
CCCGAACCTCAGCGCGAAATCCCCAAGCATTACCAGTGCCTGTATCCGAT
ATACTTCGACAAGTCGCGGACCCGCGCGGAGGGCCGCAAGGTCGGAAGTG
AGCTGGCGGTTGAGAACCCGCTGGCGAGGGACATTGTCGATGCGGTGCAG
ATGTTGGGACTGAATGTCGGGTTCGAGCCTGAGAAGCTGCACCCGAAGGA
CTGGGCCAACCCTGGACGTGTGCGCGTTTTGCTGAAGGACGAGGATGGCA
AATTGGTTAACTCGAGGATCAAGAACAGTTAGTGTACCCCAACTTGTCCG
CAAGTTACTATCAAATCCGACGCCTTTTGATATGGCCTGATCACAGTTCC
CTTTGTCTGACCATAACTACAGAGCACCACCTTTACATCCTCGTGGCGCA
ATACCTCAAGGCTCACCCTACCACCGAAGAATCCCCCTACCGTCTTAGAA
TTCGAGGACTCCCTATGCCCGAGAAACTGCCTGCTGCGCCTGCCGCTCCC
CGCGGATGGAAGATCGGAAAGATCCTGCCGATACACTCTCCGGCCTACAG
CGGTGGTGGAGTCAGCGATAACCCGCTCAAGGACGCCATGGCTGAAATGC
AGAACATGCAGGGTATGCCCGGAATGCCCCAGATACCTGGAATGCCGGAT
CTGGCAGGAATGATGGGAGGAATGGGAGGAATGGGTGGAAGTCCGTCTGC
TGGAGGCAGCGAAAAGAAGAAGAAGGATAAGAAGAAGGGCAAGGCGTGAA
GCACTTGTCGATGTTTCTTCATGTGGTACATAGGCTTTTGATTGCATTGG
CACGGGCGAAAGGCGTTATGATGATTCATGTATAG
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1233855..1234839+

>CAN33_38050-T1 ID=CAN33_38050-T1|Name=CAN33_38050-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2511bp|location=Sequence derived from alignment at NKJJ01000017.1:1233855..1234839+ (Aspergillus niger FDAARGOS_311)
ATGTCACGACACGCCCAAGTGGAGGAGGTGTATGACTCCGACCCGGAGGA
AGTTGCTCCCTCCGATTCCTCGCCCGCCAACTTTGCCAATGAGTCCCTCC
TTTCTGGAGCCGGAGTACCTATGTCTGGCTCAGTACCCATGAGACCCGCT
CCCGAACCTCAGCGCGAAATCCCCAAGCATTACCAGTGCCTGTATCCGAT
ATACTTCGACAAGTCGCGGACCCGCGCGGAGGGCCGCAAGGTCGGAAGTG
AGCTGGCGGTTGAGAACCCGCTGGCGAGGGACATTGTCGATGCGGTGCAG
ATGTTGGGACTGAATGTCGGGTTCGAGCCTGAGAAGCTGCACCCGAAGGA
CTGGGCCAACCCTGGACGTGTGCGCGTTTTGCTGAAGGACGAGGATGGCA
AATTGGTTAACTCGAGGATCAAGAACAAGCACCACCTTTACATCCTCGTG
GCGCAATACCTCAAGGCTCACCCTACCACCGAAGAATCCCCCTACCGTCT
TAGAATTCGAGGACTCCCTATGCCCGAGAAACTGCCTGCTGCGCCTGCCG
CTCCCCGCGGATGGAAGATCGGAAAGATCCTGCCGATACACTCTCCGGCC
TACAGCGGTGGTGGAGTCAGCGATAACCCGCTCAAGGACGCCATGGCTGA
AATGCAGAACATGCAGGGTATGCCCGGAATGCCCCAGATACCTGGAATGC
CGGATCTGGCAGGAATGATGGGAGGAATGGGAGGAATGGGTGGAAGCGTG
AAGCACTTGTCGATGTTTCTTCATGTGGTACATAGGCTTTTGATTGCATT
GGCACGGGCGAAAGGCGTTATGATGATTCATGTATAGATGTCACGACACG
CCCAAGTGGAGGAGGTGTATGACTCCGACCCGGAGGAAGTTGCTCCCTCC
GATTCCTCGCCCGCCAACTTTGCCAATGAGTCCCTCCTTTCTGGAGCCGG
AGTACCTATGTCTGGCTCAGTACCCATGAGACCCGCTCCCGAACCTCAGC
GCGAAATCCCCAAGCATTACCAGTGCCTGTATCCGATATACTTCGACAAG
TCGCGGACCCGCGCGGAGGGCCGCAAGGTCGGAAGTGAGCTGGCGGTTGA
GAACCCGCTGGCGAGGGACATTGTCGATGCGGTGCAGATGTTGGGACTGA
ATGTCGGGTTCGAGCCTGAGAAGCTGCACCCGAAGGACTGGGCCAACCCT
GGACGTGTGCGCGTTTTGCTGAAGGACGAGGATGGCAAATTGGTTAACTC
GAGGATCAAGAACAAGCACCACCTTTACATCCTCGTGGCGCAATACCTCA
AGGCTCACCCTACCACCGAAGAATCCCCCTACCGTCTTAGAATTCGAGGA
CTCCCTATGCCCGAGAAACTGCCTGCTGCGCCTGCCGCTCCCCGCGGATG
GAAGATCGGAAAGATCCTGCCGATACACTCTCCGGCCTACAGCGGTGGTG
GAGTCAGCGATAACCCGCTCAAGGACGCCATGGCTGAAATGCAGAACATG
CAGGGTATGCCCGGAATGCCCCAGATACCTGGAATGCCGGATCTGGCAGG
AATGATGGGAGGAATGGGAGGAATGGGTGGAAGCGTGAAGCACTTGTCGA
TGTTTCTTCATGTGGTACATAGGCTTTTGATTGCATTGGCACGGGCGAAA
GGCGTTATGATGATTCATGTATAGATGTCACGACACGCCCAAGTGGAGGA
GGTGTATGACTCCGACCCGGAGGAAGTTGCTCCCTCCGATTCCTCGCCCG
CCAACTTTGCCAATGAGTCCCTCCTTTCTGGAGCCGGAGTACCTATGTCT
GGCTCAGTACCCATGAGACCCGCTCCCGAACCTCAGCGCGAAATCCCCAA
GCATTACCAGTGCCTGTATCCGATATACTTCGACAAGTCGCGGACCCGCG
CGGAGGGCCGCAAGGTCGGAAGTGAGCTGGCGGTTGAGAACCCGCTGGCG
AGGGACATTGTCGATGCGGTGCAGATGTTGGGACTGAATGTCGGGTTCGA
GCCTGAGAAGCTGCACCCGAAGGACTGGGCCAACCCTGGACGTGTGCGCG
TTTTGCTGAAGGACGAGGATGGCAAATTGGTTAACTCGAGGATCAAGAAC
AAGCACCACCTTTACATCCTCGTGGCGCAATACCTCAAGGCTCACCCTAC
CACCGAAGAATCCCCCTACCGTCTTAGAATTCGAGGACTCCCTATGCCCG
AGAAACTGCCTGCTGCGCCTGCCGCTCCCCGCGGATGGAAGATCGGAAAG
ATCCTGCCGATACACTCTCCGGCCTACAGCGGTGGTGGAGTCAGCGATAA
CCCGCTCAAGGACGCCATGGCTGAAATGCAGAACATGCAGGGTATGCCCG
GAATGCCCCAGATACCTGGAATGCCGGATCTGGCAGGAATGATGGGAGGA
ATGGGAGGAATGGGTGGAAGCGTGAAGCACTTGTCGATGTTTCTTCATGT
GGTACATAGGCTTTTGATTGCATTGGCACGGGCGAAAGGCGTTATGATGA
TTCATGTATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0048500signal recognition particle
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: Molecular Function
TermDefinition
GO:00083127S RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_38050CAN33_38050Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38050-T1.exon1CAN33_38050-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_38050-T1.exon2CAN33_38050-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_38050-T1.exon3CAN33_38050-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38050-T1.cdsCAN33_38050-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38050-T1CAN33_38050-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092647CM
DBxrefInterPro:IPR022938
DBxrefInterPro:IPR036521
DBxrefInterPro:IPR002778
DBxrefPFAM:PF01922
ProductSRP19 protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1233855..1234839 +
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