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CAN33_38060-T1, CAN33_38060-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_38060-T1
Unique NameCAN33_38060-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1239646..1240532-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_38060-T1 ID=CAN33_38060-T1|Name=CAN33_38060-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=887bp|location=Sequence derived from alignment at NKJJ01000017.1:1239646..1240532- (Aspergillus niger FDAARGOS_311)
ATGATCATTTACACGGTCCGTATACTCTTCCCAGTCCACTTCTGAACCTG
TTGCGAGCGTGCAGCAATAAAAGGATGCGTGAAAAAAGAACAACAAACGG
CTGCATTAATCATGCAGCCTTGTTGCGTCTCTTCTGCTTCCTTACCTGCA
ATCTCTATCATCATCATCATATCCTCATGTTTTAACATCTACATACCTCA
AAGTTACTGACGTTTTTTTTTCTCATAGGATATCGTCTCCGGTGACGAGG
TTCTCTCCGACACCTTCAAGATCCAGGAGGACAGTGACAGCAAGCTCCTC
TGGACCTGCGACTGCCGCAAGTACCTCAAGAAGAAGAACGAGGACTTCGA
GCTCGAGGGTGCCAACCCCTCCGCTGAGGGCGGTGATGACGATGCCGGTG
GTGAGGGTGAGGCCGTCATGGTCCACGACATTGAGGACCAGTTCCGTCTC
GTCTGGCTCAAGACCGAGGAGGGCATGAAGCCCTCCAAGGATGCCTTCAA
GTCCCACCTCAAGAGTATGTTTTTGCACCTCTAGGCATACGGCTTAGTTA
TGACGCCCTAATGCTAACGAGTCTACCCTGTACAGACTACATGAAGAAGG
TCCTTGCCAGACTCACCGAGACCGGTGCCTCCAAGGAGACCATCGATGAG
TTCAAGGCTGGTGCCCCGCCGCCGTCAAGAAGATCCTTGGCAACTACGAC
AACTACGATGTCCTGATGGGTCAGTCCATGGACGGTGATGCTATGTACGT
TTATCTTGCCATATATTTCTTGGTTGCAACTGAAACTAACTTGATGAACC
AGGCACATCTTGATTGACTTCCGTGAGGACGGTGTCACCCCCTTCGCTAC
CCTCTGGAAGCACGGTCTCCAGGAGGTTAAGGTCTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1239646..1240532-

>CAN33_38060-T1 ID=CAN33_38060-T1|Name=CAN33_38060-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2040bp|location=Sequence derived from alignment at NKJJ01000017.1:1239646..1240532- (Aspergillus niger FDAARGOS_311)
GCACATCTTGATTGACTTCCGTGAGGACGGTGTCACCCCCTTCGCTACCC
TCTGGAAGCACGGTCTCCAGGAGGTTAAGGTCTAAACTACATGAAGAAGG
TCCTTGCCAGACTCACCGAGACCGGTGCCTCCAAGGAGACCATCGATGAG
TTCAAGGCTGGTGCCCCGCCGCCGTCAAGAAGATCCTTGGCAACTACGAC
AACTACGATGATATCGTCTCCGGTGACGAGGTTCTCTCCGACACCTTCAA
GATCCAGGAGGACAGTGACAGCAAGCTCCTCTGGACCTGCGACTGCCGCA
AGTACCTCAAGAAGAAGAACGAGGACTTCGAGCTCGAGGGTGCCAACCCC
TCCGCTGAGGGCGGTGATGACGATGCCGGTGGTGAGGGTGAGGCCGTCAT
GGTCCACGACATTGAGGACCAGTTCCGTCTCGTCTGGCTCAAGACCGAGG
AGGGCATGAAGCCCTCCAAGGATGCCTTCAAGTCCCACCTCAAGAATGAT
CATTTACACGGCACATCTTGATTGACTTCCGTGAGGACGGTGTCACCCCC
TTCGCTACCCTCTGGAAGCACGGTCTCCAGGAGGTTAAGGTCTAAACTAC
ATGAAGAAGGTCCTTGCCAGACTCACCGAGACCGGTGCCTCCAAGGAGAC
CATCGATGAGTTCAAGGCTGGTGCCCCGCCGCCGTCAAGAAGATCCTTGG
CAACTACGACAACTACGATGATATCGTCTCCGGTGACGAGGTTCTCTCCG
ACACCTTCAAGATCCAGGAGGACAGTGACAGCAAGCTCCTCTGGACCTGC
GACTGCCGCAAGTACCTCAAGAAGAAGAACGAGGACTTCGAGCTCGAGGG
TGCCAACCCCTCCGCTGAGGGCGGTGATGACGATGCCGGTGGTGAGGGTG
AGGCCGTCATGGTCCACGACATTGAGGACCAGTTCCGTCTCGTCTGGCTC
AAGACCGAGGAGGGCATGAAGCCCTCCAAGGATGCCTTCAAGTCCCACCT
CAAGAATGATCATTTACACGGCACATCTTGATTGACTTCCGTGAGGACGG
TGTCACCCCCTTCGCTACCCTCTGGAAGCACGGTCTCCAGGAGGTTAAGG
TCTAAACTACATGAAGAAGGTCCTTGCCAGACTCACCGAGACCGGTGCCT
CCAAGGAGACCATCGATGAGTTCAAGGCTGGTGCCCCGCCGCCGTCAAGA
AGATCCTTGGCAACTACGACAACTACGATGATATCGTCTCCGGTGACGAG
GTTCTCTCCGACACCTTCAAGATCCAGGAGGACAGTGACAGCAAGCTCCT
CTGGACCTGCGACTGCCGCAAGTACCTCAAGAAGAAGAACGAGGACTTCG
AGCTCGAGGGTGCCAACCCCTCCGCTGAGGGCGGTGATGACGATGCCGGT
GGTGAGGGTGAGGCCGTCATGGTCCACGACATTGAGGACCAGTTCCGTCT
CGTCTGGCTCAAGACCGAGGAGGGCATGAAGCCCTCCAAGGATGCCTTCA
AGTCCCACCTCAAGAATGATCATTTACACGGCACATCTTGATTGACTTCC
GTGAGGACGGTGTCACCCCCTTCGCTACCCTCTGGAAGCACGGTCTCCAG
GAGGTTAAGGTCTAAACTACATGAAGAAGGTCCTTGCCAGACTCACCGAG
ACCGGTGCCTCCAAGGAGACCATCGATGAGTTCAAGGCTGGTGCCCCGCC
GCCGTCAAGAAGATCCTTGGCAACTACGACAACTACGATGATATCGTCTC
CGGTGACGAGGTTCTCTCCGACACCTTCAAGATCCAGGAGGACAGTGACA
GCAAGCTCCTCTGGACCTGCGACTGCCGCAAGTACCTCAAGAAGAAGAAC
GAGGACTTCGAGCTCGAGGGTGCCAACCCCTCCGCTGAGGGCGGTGATGA
CGATGCCGGTGGTGAGGGTGAGGCCGTCATGGTCCACGACATTGAGGACC
AGTTCCGTCTCGTCTGGCTCAAGACCGAGGAGGGCATGAAGCCCTCCAAG
GATGCCTTCAAGTCCCACCTCAAGAATGATCATTTACACG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_38060CAN33_38060Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38060-T1CAN33_38060-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38060-T1.cdsCAN33_38060-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38060-T1.exon4CAN33_38060-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_38060-T1.exon3CAN33_38060-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_38060-T1.exon2CAN33_38060-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_38060-T1.exon1CAN33_38060-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09264U81
DBxrefInterPro:IPR011057
DBxrefInterPro:IPR034737
DBxrefInterPro:IPR018103
DBxrefInterPro:IPR011323
DBxrefInterPro:IPR018105
DBxrefPFAM:PF00838
Producttranslationally-controlled tumor protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1239646..1240532 -
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