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CAN33_38100-T1, CAN33_38100-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_38100-T1
Unique NameCAN33_38100-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1262124..1263657-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_38100-T1 ID=CAN33_38100-T1|Name=CAN33_38100-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1534bp|location=Sequence derived from alignment at NKJJ01000017.1:1262124..1263657- (Aspergillus niger FDAARGOS_311)
ATGACCACTCTCACACCAACCCCCGCCAATTCCACCAGCACTCCCATAAC
CCACACTCTCTCCACCTGGTTGGAAGACCTCACTCCGGAGTCTATTCCCG
TCGAAGTTCGCGAACGAGCCAAATACCTCATTCTCGATGGATTAGCCTGT
GCTCTACTGGGTGCACGACTCCCCTGGTCCGTCAAGGCGCATGATGCTAT
CACTACCATTGAGGGTCAGGGAAAATGTACCGTTATCGGATGGAATGAGG
TATTCCATTCCCTTCTGATCAAACTTCCCTTCCCAAACAGATGAGTAAAG
GACAAGAAACTAATGAGACTGATAGACCCTCTCCCCCAATGCCGCCGCCC
TCCTGAACAGCACCTTCCTCCAAGGCTTCGACCTTGACGACATCCACGTC
GAGGCCCCCATACACACCATGTCCGTCATCCTCCCAGCGATCCTCGCAGC
TGCAGAGCAGGAGCATGGCGGCTCGACTCGCCCTATCAGCGGGAATGACT
TCATTACCGCCACAGTCGCTGGCTGCGAAACTGGCCCTCGCGTCGGCTAC
GCCCTGGGCGGAACGCACATGCTCACCATTGGATGGCATTGCGGTGCCAT
CTTCGGTCCTGCTGCCTCCGCAGCAGCCGTCTCCAAGCTCCTGAATCTTC
CCGCCGCGCAGATCGAAGATGCACTGGGCATGGCGTGCACGCAGGCCTGC
GGGCTCATGTCGGCGCAGTTTGAGAGCATGGTGAAGCGCATGCAGCATGG
GTTTGCATCGCGGAGCGGAGTACTCGCCACCTATTTGGCGAAGCAGGGGT
TTACGGGGATCAAGGAGATCTTTGATCGCGAGTATGGTGGGTTCTTGAAG
ATGTTTTCGTACGGGGCGGAGACGGAGCGCAAGTATTACCCGGAGGAGGT
CTGCAAGGGATTAGGGGAAGTGTGGCAGACCAAGAAGATCAAGCAGAAGT
TGCATGCGCTGTGCGCGGTGTCGCATTGTACGGTGGATTGTATTAAGGAC
CTGCAGGCCATGTATCCTGCGAAGATGGGTGAGTGGAAGAAAATCGTCAA
GATTGAGGCGGAGATGGCGAGGGCCGCGATGAAGAAGGGTGGCTGGGCAC
CGGAGAAGCCAGCCACCGCCACGGCGGCGCAGATGAGTATACCGTATGCG
GTGGCGTTGCAGGTTCTGGATGGGGAGATTGTGCCGGGGCAGTTTGCGCC
GGGCATGTTGAATCGGGAGGAGTTATGGGATGTGATTAGGCTGGTGGAAT
GTCGGGAGGCCAAGGAGCTGGATAATACGTGGGCGCAGAGGGTCAAGATC
ACGTTTGAGGATGGGGAGGTGGTGGAGAAGTTGTTGAAGGCTCCGAAGGG
AGTCCATCCTGGGGTGACGAATGAGGAGGTGTTGCAGAAGTGGCGGGCTG
TGACGAAGGGGGTAATTTCGGAAGAGAGGCAGAAGAAGATCGAGGAGATT
GTGTTGAATTTGGAAGAGGTGGAGGATGTGGCTGGTGTTTTGGGCGAGTT
GTTGAGGGAAGAGACGGTGAATGTGCTGCAGTAG
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1262124..1263657-

>CAN33_38100-T1 ID=CAN33_38100-T1|Name=CAN33_38100-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2916bp|location=Sequence derived from alignment at NKJJ01000017.1:1262124..1263657- (Aspergillus niger FDAARGOS_311)
ACCCTCTCCCCCAATGCCGCCGCCCTCCTGAACAGCACCTTCCTCCAAGG
CTTCGACCTTGACGACATCCACGTCGAGGCCCCCATACACACCATGTCCG
TCATCCTCCCAGCGATCCTCGCAGCTGCAGAGCAGGAGCATGGCGGCTCG
ACTCGCCCTATCAGCGGGAATGACTTCATTACCGCCACAGTCGCTGGCTG
CGAAACTGGCCCTCGCGTCGGCTACGCCCTGGGCGGAACGCACATGCTCA
CCATTGGATGGCATTGCGGTGCCATCTTCGGTCCTGCTGCCTCCGCAGCA
GCCGTCTCCAAGCTCCTGAATCTTCCCGCCGCGCAGATCGAAGATGCACT
GGGCATGGCGTGCACGCAGGCCTGCGGGCTCATGTCGGCGCAGTTTGAGA
GCATGGTGAAGCGCATGCAGCATGGGTTTGCATCGCGGAGCGGAGTACTC
GCCACCTATTTGGCGAAGCAGGGGTTTACGGGGATCAAGGAGATCTTTGA
TCGCGAGTATGGTGGGTTCTTGAAGATGTTTTCGTACGGGGCGGAGACGG
AGCGCAAGTATTACCCGGAGGAGGTCTGCAAGGGATTAGGGGAAGTGTGG
CAGACCAAGAAGATCAAGCAGAAGTTGCATGCGCTGTGCGCGGTGTCGCA
TTGTACGGTGGATTGTATTAAGGACCTGCAGGCCATGTATCCTGCGAAGA
TGGGTGAGTGGAAGAAAATCGTCAAGATTGAGGCGGAGATGGCGAGGGCC
GCGATGAAGAAGGGTGGCTGGGCACCGGAGAAGCCAGCCACCGCCACGGC
GGCGCAGATGAGTATACCGTATGCGGTGGCGTTGCAGGTTCTGGATGGGG
AGATTGTGCCGGGGCAGTTTGCGCCGGGCATGTTGAATCGGGAGGAGTTA
TGGGATGTGATTAGGCTGGTGGAATGTCGGGAGGCCAAGGAGCTGGATAA
TACGTGGGCGCAGAGGGTCAAGATCACGTTTGAGGATGGGGAGGTGGTGG
AGAAGTTGTTGAAGGCTCCGAAGGGAGTCCATCCTGGGGTGACGAATGAG
GAGGTGTTGCAGAAGTGGCGGGCTGTGACGAAGGGGGTAATTTCGGAAGA
GAGGCAGAAGAAGATCGAGGAGATTGTGTTGAATTTGGAAGAGGTGGAGG
ATGTGGCTGGTGTTTTGGGCGAGTTGTTGAGGGAAGAGACGGTGAATGTG
CTGCAGTAGATGACCACTCTCACACCAACCCCCGCCAATTCCACCAGCAC
TCCCATAACCCACACTCTCTCCACCTGGTTGGAAGACCTCACTCCGGAGT
CTATTCCCGTCGAAGTTCGCGAACGAGCCAAATACCTCATTCTCGATGGA
TTAGCCTGTGCTCTACTGGGTGCACGACTCCCCTGGTCCGTCAAGGCGCA
TGATGCTATCACTACCATTGAGGGTCAGGGAAAATGTACCGTTATCGGAT
GGAATGAGACCCTCTCCCCCAATGCCGCCGCCCTCCTGAACAGCACCTTC
CTCCAAGGCTTCGACCTTGACGACATCCACGTCGAGGCCCCCATACACAC
CATGTCCGTCATCCTCCCAGCGATCCTCGCAGCTGCAGAGCAGGAGCATG
GCGGCTCGACTCGCCCTATCAGCGGGAATGACTTCATTACCGCCACAGTC
GCTGGCTGCGAAACTGGCCCTCGCGTCGGCTACGCCCTGGGCGGAACGCA
CATGCTCACCATTGGATGGCATTGCGGTGCCATCTTCGGTCCTGCTGCCT
CCGCAGCAGCCGTCTCCAAGCTCCTGAATCTTCCCGCCGCGCAGATCGAA
GATGCACTGGGCATGGCGTGCACGCAGGCCTGCGGGCTCATGTCGGCGCA
GTTTGAGAGCATGGTGAAGCGCATGCAGCATGGGTTTGCATCGCGGAGCG
GAGTACTCGCCACCTATTTGGCGAAGCAGGGGTTTACGGGGATCAAGGAG
ATCTTTGATCGCGAGTATGGTGGGTTCTTGAAGATGTTTTCGTACGGGGC
GGAGACGGAGCGCAAGTATTACCCGGAGGAGGTCTGCAAGGGATTAGGGG
AAGTGTGGCAGACCAAGAAGATCAAGCAGAAGTTGCATGCGCTGTGCGCG
GTGTCGCATTGTACGGTGGATTGTATTAAGGACCTGCAGGCCATGTATCC
TGCGAAGATGGGTGAGTGGAAGAAAATCGTCAAGATTGAGGCGGAGATGG
CGAGGGCCGCGATGAAGAAGGGTGGCTGGGCACCGGAGAAGCCAGCCACC
GCCACGGCGGCGCAGATGAGTATACCGTATGCGGTGGCGTTGCAGGTTCT
GGATGGGGAGATTGTGCCGGGGCAGTTTGCGCCGGGCATGTTGAATCGGG
AGGAGTTATGGGATGTGATTAGGCTGGTGGAATGTCGGGAGGCCAAGGAG
CTGGATAATACGTGGGCGCAGAGGGTCAAGATCACGTTTGAGGATGGGGA
GGTGGTGGAGAAGTTGTTGAAGGCTCCGAAGGGAGTCCATCCTGGGGTGA
CGAATGAGGAGGTGTTGCAGAAGTGGCGGGCTGTGACGAAGGGGGTAATT
TCGGAAGAGAGGCAGAAGAAGATCGAGGAGATTGTGTTGAATTTGGAAGA
GGTGGAGGATGTGGCTGGTGTTTTGGGCGAGTTGTTGAGGGAAGAGACGG
TGAATGTGCTGCAGTAGATGACCACTCTCACACCAACCCCCGCCAATTCC
ACCAGCACTCCCATAACCCACACTCTCTCCACCTGGTTGGAAGACCTCAC
TCCGGAGTCTATTCCCGTCGAAGTTCGCGAACGAGCCAAATACCTCATTC
TCGATGGATTAGCCTGTGCTCTACTGGGTGCACGACTCCCCTGGTCCGTC
AAGGCGCATGATGCTATCACTACCATTGAGGGTCAGGGAAAATGTACCGT
TATCGGATGGAATGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_38100CAN33_38100Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38100-T1CAN33_38100-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38100-T1.cdsCAN33_38100-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38100-T1.exon2CAN33_38100-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_38100-T1.exon1CAN33_38100-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036148
DBxrefInterPro:IPR042183
DBxrefInterPro:IPR005656
DBxrefPFAM:PF03972
ProductMmgE/PrpD family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1262124..1263657 -
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