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CAN33_38125-T1, CAN33_38125-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_38125-T1
Unique NameCAN33_38125-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1271343..1273928-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_38125-T1 ID=CAN33_38125-T1|Name=CAN33_38125-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2586bp|location=Sequence derived from alignment at NKJJ01000017.1:1271343..1273928- (Aspergillus niger FDAARGOS_311)
ATGGCCGGTGATCGCTCTTCATCTCACGATCCTGCCCGCATAAGCTCAGG
AACTCCGTCGAGCGCCAAGAAGTCCCAAAAAAGAAAGAGAGATCTTGATG
GCTCCGCCACCGCTATATCCACACCGACCCCGACGAAGAAATCCAAGAAG
AATCAGGGTTCTCCATCCAACGATACCCCAGTCAAAGAAAGCCGGAAGAA
GAAAAAGCACTCGGGAGCTGCAAGCCGCAGTGCTGTTCAAGAGACTTCGC
CCCAGAAAGAGAGTGCTGTCTCGCCGGTCGGCGGCCAAACGACTACTGCA
AACCAAGACGACAGCCTCACTAAGAAAAAGAAGAAGTCGAAGGATGGAAA
GCGGAAAAGCGGAACAATTAGCGATGCAGTTGAGGGAGATGTCGATATGA
AGGATGCGGACGACTCTGAAGAAGTTAAAGAGGAACAAGCCAAAGGGACA
AAGAAAGGCCGAAAGAGTTCTGAGCCCGCAGCGACAGAGAATGACGACGA
CAAACCTACGAAGAACAAATTTGCCGGCATCCTGTCCAAGTTTGAGAGGT
CGAAAAAAGCACGGGAGCTGGAAAAGACAAGAGAAAGCACGAAGGATGAA
GATTCCACTGAGCCAACGACAGCAGAGCCAGTTATAGCACAAGGTCTGGA
GCCGTTACCACAACCAGAGGCAGCGCCTGAGCAGGATGAGATGCCAACTT
ACTCCTCGCTGCCGCCGTGGCTGGCCAATCCCCTCCGTGCATCGGCTCAG
GAACGACGCAAATTCGCCGATTTAGGAATCGACTCTAGCCTCCTCCGAGT
TCTGGAAGACAACGGCTATCGTGAAGCATTTGCCGTGCAGTCAACCGTCA
TTCCTCTCCTCCTGCAAGGACCTACGAACCACCCAGGAGACCTTTGCATC
TCCGCCGCTACTGGTTCAGGAAAAACTTTGTCCTACGTTCTACCATTGGT
CACGGCCTTGAAGCCGCTCCCTGCGCCTCGGTTACGAGGACTCATCGTGG
TACCTACTCGAGAGCTGGTGAAGCAGGCCAGAGAAGCTTGTGAACTCTGT
GCCGCTGGATCCGGCCTCCGCGTCGCGTCGGCAGTTGGAAACGTTGCGAT
CAAAGACGAGCAGCGGTCGTTGATGCGCGTTGATCAGGTCTATGGCCCTG
CGACATTCAAGCTTCGCCAGAACGTGCAACTGACAGGTGATGATTGGACG
AACTTCAATTTGCAGGACTACATCTCAGACGCTGGTGATCTAAGCGAGTC
TCTGCCAGGCTACGTTCACCGGTCAGAGCCTAATGTCGACATCTTAATCT
GTACTCCCGGTCGTCTGGTCGATCATCTTCGCTATACCAAAGGTTTCACT
CTTAAGAATCTCGAATGGCTTGTCATTGACGAGGCAGATCGACTACTAAA
TGAAAGTTTCCAGGAATGGGTGGACGTCGTGATGACCTCCCTGGACGCCC
GGAAAGCCCCTGATGCATTCGGGTTTAGTGGAAACTTTCTGTCCGGGCTT
GGCTTGCCGATCCAAAGCAAGGAACCAAGGAAAGTCGTTTTGAGTGCCAC
TATGACTAGAGATGTGACGAAGCTTAACTCTCTGCGTCTTGCGAACCCCA
AGCTAGTCGTCATCGGCTCCGATGCCGCTGCAACAGAAGATGAGAGCGGT
GGCGTTGCACCGTCAGACGAACAGTTTACGCTCCCGCCTACCCTAGAGGA
GCACACCGTATCGGTTGGAGATGGGTCGCAGAAGCCGCTTTATCTCCTGC
GCCTTCTGCTGTCCCACATCAAGCTTGAGACTAAGAGTATCAAGCCTTCT
GTGCACGACGCTTCTGAATCTGATGATTCTGATTCCGACGAATCAAGCTC
TGAATCGGATTCCGATGACGCGTCGGACGTGTCTAGCTCTGAAGATTCCG
ATTCCGACTCAGACTCGGATTCTGACTCTGATACAAGTTCTGACTCGTCC
ACAGACTCTGAGGATACCTCGGAGGACGAGTCGAGCGATGATTCAGAGTC
GTCGGACAGCGATTCTGAATCAGAGGACGAAAAGTCGGACCGACAAGGGC
CTTCGCAGACCACAGTTCTGGTCTTCACGAAGTCATCTGAATCCGCATCA
CGACTGGCTCGCCTGTTGGCACTCCTCGAACCCTCCCTCTCTGACCGCAT
TGGCACGATCATTAAATCCAACAAATCGTCCGCTTCGCGCAAGACCCTCA
CAGCTTACCGCCGGGGCAAGATCTCCGTGATTATTGCAACGGACCGGGCC
TCGCGTGGTCTAGACCTACGGTCACTGACCCATGTTGTCAACTACGATGT
GCCAGCTAGCATTACTACCTACGTGCACCGAGTTGGTCGTACAGCTCGAG
CTGGTCAGAAAGGATCGGCATGGACGCTTGTGGCACACCGAGAGGGCAAG
TGGTTCGCAAGCCAGATCGCCAAGGGCTCGGATGGAAAGATCACTCGGTC
CACCAAGGTTGGAAAGGTGCAATTCAAATTGGACAATATGAAGGAGGTCA
AGGCACGCTATGCATCTGCATTGGACCTGCTGGAGAAGGAAGTGAAGACG
GGTGGGACTAAGGCCTCCAAGCCCAGCGCACAATGA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1271343..1273928-

>CAN33_38125-T1 ID=CAN33_38125-T1|Name=CAN33_38125-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4980bp|location=Sequence derived from alignment at NKJJ01000017.1:1271343..1273928- (Aspergillus niger FDAARGOS_311)
GACGAGTCGAGCGATGATTCAGAGTCGTCGGACAGCGATTCTGAATCAGA
GGACGAAAAGTCGGACCGACAAGGGCCTTCGCAGACCACAGTTCTGGTCT
TCACGAAGTCATCTGAATCCGCATCACGACTGGCTCGCCTGTTGGCACTC
CTCGAACCCTCCCTCTCTGACCGCATTGGCACGATCATTAAATCCAACAA
ATCGTCCGCTTCGCGCAAGACCCTCACAGCTTACCGCCGGGGCAAGATCT
CCGTGATTATTGCAACGGACCGGGCCTCGCGTGGTCTAGACCTACGGTCA
CTGACCCATGTTGTCAACTACGATGTGCCAGCTAGCATTACTACCTACGT
GCACCGAGTTGGTCGTACAGCTCGAGCTGGTCAGAAAGGATCGGCATGGA
CGCTTGTGGCACACCGAGAGGGCAAGTGGTTCGCAAGCCAGATCGCCAAG
GGCTCGGATGGAAAGATCACTCGGTCCACCAAGGTTGGAAAGGTGCAATT
CAAATTGGACAATATGAAGGAGGTCAAGGCACGCTATGCATCTGCATTGG
ACCTGCTGGAGAAGGAAGTGAAGACGGGTGGGACTAAGGCCTCCAAGCCC
AGCGCACAATGAATGGCCGGTGATCGCTCTTCATCTCACGATCCTGCCCG
CATAAGCTCAGGAACTCCGTCGAGCGCCAAGAAGTCCCAAAAAAGAAAGA
GAGATCTTGATGGCTCCGCCACCGCTATATCCACACCGACCCCGACGAAG
AAATCCAAGAAGAATCAGGGTTCTCCATCCAACGATACCCCAGTCAAAGA
AAGCCGGAAGAAGAAAAAGCACTCGGGAGCTGCAAGCCGCAGTGCTGTTC
AAGAGACTTCGCCCCAGAAAGAGAGTGCTGTCTCGCCGGTCGGCGGCCAA
ACGACTACTGCAAACCAAGACGACAGCCTCACTAAGAAAAAGAAGAAGTC
GAAGGATGGAAAGCGGAAAAGCGGAACAATTAGCGATGCAGTTGAGGGAG
ATGTCGATATGAAGGATGCGGACGACTCTGAAGAAGTTAAAGAGGAACAA
GCCAAAGGGACAAAGAAAGGCCGAAAGAGTTCTGAGCCCGCAGCGACAGA
GAATGACGACGACAAACCTACGAAGAACAAATTTGCCGGCATCCTGTCCA
AGTTTGAGAGGTCGAAAAAAGCACGGGAGCTGGAAAAGACAAGAGAAAGC
ACGAAGGATGAAGATTCCACTGAGCCAACGACAGCAGAGCCAGTTATAGC
ACAAGGTCTGGAGCCGTTACCACAACCAGAGGCAGCGCCTGAGCAGGATG
AGATGCCAACTTACTCCTCGCTGCCGCCGTGGCTGGCCAATCCCCTCCGT
GCATCGGCTCAGGAACGACGCAAATTCGCCGATTTAGGAATCGACTCTAG
CCTCCTCCGAGTTCTGGAAGACAACGGCTATCGTGAAGCATTTGCCGTGC
AGTCAACCGTCATTCCTCTCCTCCTGCAAGGACCTACGAACCACCCAGGA
GACCTTTGCATCTCCGCCGCTACTGGTTCAGGAAAAACTTTGTCCTACGT
TCTACCATTGGTCACGGCCTTGAAGCCGCTCCCTGCGCCTCGGTTACGAG
GACTCATCGTGGTACCTACTCGAGAGCTGGTGAAGCAGGCCAGAGAAGCT
TGTGAACTCTGTGCCGCTGGATCCGGCCTCCGCGTCGCGTCGGCAGTTGG
AAACGTTGCGATCAAAGACGAGCAGCGGTCGTTGATGCGCGTTGATCAGG
TCTATGGCCCTGCGACATTCAAGCTTCGCCAGAACGTGCAACTGACAGGT
GATGATTGGACGAACTTCAATTTGCAGGACTACATCTCAGACGCTGGTGA
TCTAAGCGAGTCTCTGCCAGGCTACGTTCACCGGTCAGAGCCTAATGTCG
ACATCTTAATCTGTACTCCCGGTCGTCTGGTCGATCATCTTCGCTATACC
AAAGGTTTCACTCTTAAGAATCTCGAATGGCTTGTCATTGACGAGGCAGA
TCGACTACTAAATGAAAGTTTCCAGGAATGGGTGGACGTCGTGATGACCT
CCCTGGACGCCCGGAAAGCCCCTGATGCATTCGGGTTTAGTGGAAACTTT
CTGTCCGGGCTTGGCTTGCCGATCCAAAGCAAGGAACCAAGGAAAGTCGT
TTTGAGTGCCACTATGACTAGAGATGTGACGAAGCTTAACTCTCTGCGTC
TTGCGAACCCCAAGCTAGTCGTCATCGGCTCCGATGCCGCTGCAACAGAA
GATGAGAGCGGTGGCGTTGCACCGTCAGACGAACAGTTTACGCTCCCGCC
TACCCTAGAGGAGCACACCGTATCGGTTGGAGATGGGTCGCAGAAGCCGC
TTTATCTCCTGCGCCTTCTGCTGTCCCACATCAAGCTTGAGACTAAGAGT
ATCAAGCCTTCTGTGCACGACGCTTCTGAATCTGATGATTCTGATTCCGA
CGAATCAAGCTCTGAATCGGATTCCGATGACGCGTCGGACGACGAGTCGA
GCGATGATTCAGAGTCGTCGGACAGCGATTCTGAATCAGAGGACGAAAAG
TCGGACCGACAAGGGCCTTCGCAGACCACAGTTCTGGTCTTCACGAAGTC
ATCTGAATCCGCATCACGACTGGCTCGCCTGTTGGCACTCCTCGAACCCT
CCCTCTCTGACCGCATTGGCACGATCATTAAATCCAACAAATCGTCCGCT
TCGCGCAAGACCCTCACAGCTTACCGCCGGGGCAAGATCTCCGTGATTAT
TGCAACGGACCGGGCCTCGCGTGGTCTAGACCTACGGTCACTGACCCATG
TTGTCAACTACGATGTGCCAGCTAGCATTACTACCTACGTGCACCGAGTT
GGTCGTACAGCTCGAGCTGGTCAGAAAGGATCGGCATGGACGCTTGTGGC
ACACCGAGAGGGCAAGTGGTTCGCAAGCCAGATCGCCAAGGGCTCGGATG
GAAAGATCACTCGGTCCACCAAGGTTGGAAAGGTGCAATTCAAATTGGAC
AATATGAAGGAGGTCAAGGCACGCTATGCATCTGCATTGGACCTGCTGGA
GAAGGAAGTGAAGACGGGTGGGACTAAGGCCTCCAAGCCCAGCGCACAAT
GAATGGCCGGTGATCGCTCTTCATCTCACGATCCTGCCCGCATAAGCTCA
GGAACTCCGTCGAGCGCCAAGAAGTCCCAAAAAAGAAAGAGAGATCTTGA
TGGCTCCGCCACCGCTATATCCACACCGACCCCGACGAAGAAATCCAAGA
AGAATCAGGGTTCTCCATCCAACGATACCCCAGTCAAAGAAAGCCGGAAG
AAGAAAAAGCACTCGGGAGCTGCAAGCCGCAGTGCTGTTCAAGAGACTTC
GCCCCAGAAAGAGAGTGCTGTCTCGCCGGTCGGCGGCCAAACGACTACTG
CAAACCAAGACGACAGCCTCACTAAGAAAAAGAAGAAGTCGAAGGATGGA
AAGCGGAAAAGCGGAACAATTAGCGATGCAGTTGAGGGAGATGTCGATAT
GAAGGATGCGGACGACTCTGAAGAAGTTAAAGAGGAACAAGCCAAAGGGA
CAAAGAAAGGCCGAAAGAGTTCTGAGCCCGCAGCGACAGAGAATGACGAC
GACAAACCTACGAAGAACAAATTTGCCGGCATCCTGTCCAAGTTTGAGAG
GTCGAAAAAAGCACGGGAGCTGGAAAAGACAAGAGAAAGCACGAAGGATG
AAGATTCCACTGAGCCAACGACAGCAGAGCCAGTTATAGCACAAGGTCTG
GAGCCGTTACCACAACCAGAGGCAGCGCCTGAGCAGGATGAGATGCCAAC
TTACTCCTCGCTGCCGCCGTGGCTGGCCAATCCCCTCCGTGCATCGGCTC
AGGAACGACGCAAATTCGCCGATTTAGGAATCGACTCTAGCCTCCTCCGA
GTTCTGGAAGACAACGGCTATCGTGAAGCATTTGCCGTGCAGTCAACCGT
CATTCCTCTCCTCCTGCAAGGACCTACGAACCACCCAGGAGACCTTTGCA
TCTCCGCCGCTACTGGTTCAGGAAAAACTTTGTCCTACGTTCTACCATTG
GTCACGGCCTTGAAGCCGCTCCCTGCGCCTCGGTTACGAGGACTCATCGT
GGTACCTACTCGAGAGCTGGTGAAGCAGGCCAGAGAAGCTTGTGAACTCT
GTGCCGCTGGATCCGGCCTCCGCGTCGCGTCGGCAGTTGGAAACGTTGCG
ATCAAAGACGAGCAGCGGTCGTTGATGCGCGTTGATCAGGTCTATGGCCC
TGCGACATTCAAGCTTCGCCAGAACGTGCAACTGACAGGTGATGATTGGA
CGAACTTCAATTTGCAGGACTACATCTCAGACGCTGGTGATCTAAGCGAG
TCTCTGCCAGGCTACGTTCACCGGTCAGAGCCTAATGTCGACATCTTAAT
CTGTACTCCCGGTCGTCTGGTCGATCATCTTCGCTATACCAAAGGTTTCA
CTCTTAAGAATCTCGAATGGCTTGTCATTGACGAGGCAGATCGACTACTA
AATGAAAGTTTCCAGGAATGGGTGGACGTCGTGATGACCTCCCTGGACGC
CCGGAAAGCCCCTGATGCATTCGGGTTTAGTGGAAACTTTCTGTCCGGGC
TTGGCTTGCCGATCCAAAGCAAGGAACCAAGGAAAGTCGTTTTGAGTGCC
ACTATGACTAGAGATGTGACGAAGCTTAACTCTCTGCGTCTTGCGAACCC
CAAGCTAGTCGTCATCGGCTCCGATGCCGCTGCAACAGAAGATGAGAGCG
GTGGCGTTGCACCGTCAGACGAACAGTTTACGCTCCCGCCTACCCTAGAG
GAGCACACCGTATCGGTTGGAGATGGGTCGCAGAAGCCGCTTTATCTCCT
GCGCCTTCTGCTGTCCCACATCAAGCTTGAGACTAAGAGTATCAAGCCTT
CTGTGCACGACGCTTCTGAATCTGATGATTCTGATTCCGACGAATCAAGC
TCTGAATCGGATTCCGATGACGCGTCGGAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP6CAN33_38125Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38125-T1CAN33_38125-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38125-T1.cdsCAN33_38125-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38125-T1.exon2CAN33_38125-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_38125-T1.exon1CAN33_38125-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09261EM7
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR001650
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
ProductATP-dependent RNA helicase dbp6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1271343..1273928 -
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