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CAN33_38155-T1, CAN33_38155-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_38155-T1
Unique NameCAN33_38155-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1283202..1284345-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_38155-T1 ID=CAN33_38155-T1|Name=CAN33_38155-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1144bp|location=Sequence derived from alignment at NKJJ01000017.1:1283202..1284345- (Aspergillus niger FDAARGOS_311)
ATGGACTTCGCATCGTTGATGTCCAAAGAGATCTCCAAAGCAAAACCCAA
AGCAGACTCCCAAGATTCCTCCAAGCCCAAATACACCCGGCGCGGCGATC
TCGAAGCCGCCCGCATCGCAGCCTACAATGAAGAACAAGAGCGCCTAGCC
CGCGAACGCGAAGAGCGTAACGCCCAGAAACGCAAGCTCGAAGACGAAGA
AGCCGACCGCCGTCGCGAGCGGGAAGAGAAGAAGCGCAGACTGGCCGAGG
AGTCGCGCAAGAAGCGCGAAGAGGAAGAAGCTGCTCGCGAACGAGAGCGC
AGGAAGAGACTCGGCTTGCCGGAACTGCCGCCTACGGAGTCTGGAGATGA
TAAAGAGGGTGAGGGTAAGGAAGGTGGCGAGGAGGATATACCGGAGGAGG
AGCTCTTGAAGAAGTTACGGGAGATGGAGGAGCCGGCGATATTGTTTGGG
GAGACGCATAAGGGCCGGCTGAGGCGGTATAGGAGGCTGTTGCAGCGGTC
GTTGACGCCGCAGCCGCAGTTGTCGGATGGGCCGATCCCGACAACGCTGG
AGCTGGTGCCGGAGGTGGACATGAAGATTCCGGAGACGGCGCCGAAGGAT
CTGGAGGGGAAGAAGTTCTTGTTTCGCCAGCTGGCGTCGTACTTCAATAT
GGTGTTGCGGGAGTGGGAGTTGGCGTTGGCGAAGCGAGATGCATCGGTCA
AGCTGAGCTTGCAGGGGAAACAGGCGTATAATGCGATGGTGCAGTCGCGG
GAGAACATGAAGCCGTTGTTTCGCAAGTTCGAGAAGGTTGATATTGATGA
TGGGGTGCTCGACCATGTGGTTGAGATTGTGTCCAAGGCGCAGCAACGGC
GGTATGTCGATGCTAATGATGCCTACCTTCGGTTGAGTATTGGAAAAGCG
TACGTATCTTCTTTCTGTTCTGAGGCTTTGTTCCTGGCTAATGTTTTGCA
GTGCTTGGCCTATCGGTGTGACCATGGTTGGTATTCACGAACGTTCCGCA
CGAGAGAAGCTGCATCAGAGCGATCAGCAGGCGCATATTCTGAGTGACGA
GATTACGCGCAAGTACTTGCAGAGCATCAAGCGGTGCCTCAGCTTTGCGC
AGACGCGTTGGCCCCCGGATGACCAGTTGCAGATCATGGGCTAG
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1283202..1284345-

>CAN33_38155-T1 ID=CAN33_38155-T1|Name=CAN33_38155-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2184bp|location=Sequence derived from alignment at NKJJ01000017.1:1283202..1284345- (Aspergillus niger FDAARGOS_311)
TGCTTGGCCTATCGGTGTGACCATGGTTGGTATTCACGAACGTTCCGCAC
GAGAGAAGCTGCATCAGAGCGATCAGCAGGCGCATATTCTGAGTGACGAG
ATTACGCGCAAGTACTTGCAGAGCATCAAGCGGTGCCTCAGCTTTGCGCA
GACGCGTTGGCCCCCGGATGACCAGTTGCAGATCATGGGCTAGATGGACT
TCGCATCGTTGATGTCCAAAGAGATCTCCAAAGCAAAACCCAAAGCAGAC
TCCCAAGATTCCTCCAAGCCCAAATACACCCGGCGCGGCGATCTCGAAGC
CGCCCGCATCGCAGCCTACAATGAAGAACAAGAGCGCCTAGCCCGCGAAC
GCGAAGAGCGTAACGCCCAGAAACGCAAGCTCGAAGACGAAGAAGCCGAC
CGCCGTCGCGAGCGGGAAGAGAAGAAGCGCAGACTGGCCGAGGAGTCGCG
CAAGAAGCGCGAAGAGGAAGAAGCTGCTCGCGAACGAGAGCGCAGGAAGA
GACTCGGCTTGCCGGAACTGCCGCCTACGGAGTCTGGAGATGATAAAGAG
GGTGAGGGTAAGGAAGGTGGCGAGGAGGATATACCGGAGGAGGAGCTCTT
GAAGAAGTTACGGGAGATGGAGGAGCCGGCGATATTGTTTGGGGAGACGC
ATAAGGGCCGGCTGAGGCGGTATAGGAGGCTGTTGCAGCGGTCGTTGACG
CCGCAGCCGCAGTTGTCGGATGGGCCGATCCCGACAACGCTGGAGCTGGT
GCCGGAGGTGGACATGAAGATTCCGGAGACGGCGCCGAAGGATCTGGAGG
GGAAGAAGTTCTTGTTTCGCCAGCTGGCGTCGTACTTCAATATGGTGTTG
CGGGAGTGGGAGTTGGCGTTGGCGAAGCGAGATGCATCGGTCAAGCTGAG
CTTGCAGGGGAAACAGGCGTATAATGCGATGGTGCAGTCGCGGGAGAACA
TGAAGCCGTTGTTTCGCAAGTTCGAGAAGGTTGATATTGATGATGGGGTG
CTCGACCATGTGGTTGAGATTGTGTCCAAGGCGCAGCAACGGCGGTATGT
CGATGCTAATGATGCCTACCTTCGGTTGAGTATTGGAAAAGCTGCTTGGC
CTATCGGTGTGACCATGGTTGGTATTCACGAACGTTCCGCACGAGAGAAG
CTGCATCAGAGCGATCAGCAGGCGCATATTCTGAGTGACGAGATTACGCG
CAAGTACTTGCAGAGCATCAAGCGGTGCCTCAGCTTTGCGCAGACGCGTT
GGCCCCCGGATGACCAGTTGCAGATCATGGGCTAGATGGACTTCGCATCG
TTGATGTCCAAAGAGATCTCCAAAGCAAAACCCAAAGCAGACTCCCAAGA
TTCCTCCAAGCCCAAATACACCCGGCGCGGCGATCTCGAAGCCGCCCGCA
TCGCAGCCTACAATGAAGAACAAGAGCGCCTAGCCCGCGAACGCGAAGAG
CGTAACGCCCAGAAACGCAAGCTCGAAGACGAAGAAGCCGACCGCCGTCG
CGAGCGGGAAGAGAAGAAGCGCAGACTGGCCGAGGAGTCGCGCAAGAAGC
GCGAAGAGGAAGAAGCTGCTCGCGAACGAGAGCGCAGGAAGAGACTCGGC
TTGCCGGAACTGCCGCCTACGGAGTCTGGAGATGATAAAGAGGGTGAGGG
TAAGGAAGGTGGCGAGGAGGATATACCGGAGGAGGAGCTCTTGAAGAAGT
TACGGGAGATGGAGGAGCCGGCGATATTGTTTGGGGAGACGCATAAGGGC
CGGCTGAGGCGGTATAGGAGGCTGTTGCAGCGGTCGTTGACGCCGCAGCC
GCAGTTGTCGGATGGGCCGATCCCGACAACGCTGGAGCTGGTGCCGGAGG
TGGACATGAAGATTCCGGAGACGGCGCCGAAGGATCTGGAGGGGAAGAAG
TTCTTGTTTCGCCAGCTGGCGTCGTACTTCAATATGGTGTTGCGGGAGTG
GGAGTTGGCGTTGGCGAAGCGAGATGCATCGGTCAAGCTGAGCTTGCAGG
GGAAACAGGCGTATAATGCGATGGTGCAGTCGCGGGAGAACATGAAGCCG
TTGTTTCGCAAGTTCGAGAAGGTTGATATTGATGATGGGGTGCTCGACCA
TGTGGTTGAGATTGTGTCCAAGGCGCAGCAACGGCGGTATGTCGATGCTA
ATGATGCCTACCTTCGGTTGAGTATTGGAAAAGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005681spliceosomal complex
Vocabulary: Biological Process
TermDefinition
GO:0008380RNA splicing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_38155CAN33_38155Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38155-T1CAN33_38155-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38155-T1.cdsCAN33_38155-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38155-T1.exon2CAN33_38155-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_38155-T1.exon1CAN33_38155-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG0926420U
DBxrefInterPro:IPR004098
DBxrefInterPro:IPR036285
DBxrefInterPro:IPR014906
DBxrefPFAM:PF08799
DBxrefPFAM:PF02840
ProductPrp18 domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1283202..1284345 -
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