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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:1304383..1306251+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_38210-T1 ID=CAN33_38210-T1|Name=CAN33_38210-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1869bp|location=Sequence derived from alignment at NKJJ01000017.1:1304383..1306251+ (Aspergillus niger FDAARGOS_311)
ATGTGTACTACAAATACTACTATCACCCATCCCTCCAAATCCCGTCCTAT
CGTCATCATTGGCGCGGGCATTCTAGGTCGCCGCATCGCCGCCGTCTTCT
CATCTGCCGGCTATAGCGTGCACATCAGCGATCCATCGCCCTCTGCCCTT
GACTCTGCGAGAACTTACATCTCGACGCACATCCACGAATTCACTACCCA
TATCCCTCGTCCTTCTTTATCTCCGGGCCCAATCTCAACCTTTACCTCCG
TCCCCGAAGCAGTCGCCACAGCCTGGCTCATCGTCGAAGCCGTTCCTGAG
ATCCTGCCCATAAAGCAATCCCTCTTCGCAGACCTCCACGCCCACAGTCC
AGCGGACTGCATCCTTGCATCGAACAGCAGCAGTTACAAATCCCGTCTTA
TAGGCGGTCATCTACCACTGCCACGACGGGTCCTTCTTCTCAACATGCAT
TTCACTATGCCACCGGCTATCCGTACCGTGGAGCTAATGACCTGCGGGGA
TACGCACGAGCGGGTATTCCCCATGCTCAGTGGGGTGTTGAGTGAATGTG
GAGTTATCCCCGTGACGGCACGGAAAGAGTCCACGGGGTTTATCTTCAAT
CGTCTCTGGGCGGCGATTAAGCGTGAGATACTGATGATTCTGGCGGAGGG
AGTGAGTGAGCCAGCGGAGATTGATCTGTTGTGGAGGGAGATGTTCGGTA
GGAAGGAGAGTTTGCCGCCGTGTCGGTTGATGGATGCAGTTGGGCTGGAT
ACGGTGGCTGATATTGAGGAGAATTATGTGCGGGAGAGAAGACTGGATGG
ACAGTTGACGGTGGATTGGGTGAGGGAGAGGTTTGTGAGTGTTGGGAAGG
TCGGGAGGAAGGCTGAGGGATTGGGAGGGTTGTATCCTCCTGACTCTACT
GAGGACGTGAATGGGAAGACGGAGGGAAAAGGGCCTCTGCTCTATCTTCT
TGATGTTGGGTTGGGAGCAAATACACCTGATATCGAGAAGGTTTCTACCG
CTGGGAGGATACTGAAGTTCCAGCCGGGCACCACTGGCATGCCCGTCCCC
ATTATCACAGGCCAGTCTCTCCCCGATGGGATTGACGTGTCTCAGACGAT
AGGACGCATCTTCTGGACCAATATGGGGCAGTCGACATCCACGCACGACG
GATCCGTGCACTCGGCGACACTAGATGGCCAGGATATATGCACTTTACTT
CCAGCTGGGGCGGTGCATACGCCAAAGCAGCTTGTTGTCGACGACACAAC
GCAGCATGTGTATTTCTGTGATCGCGAAGGGATGAGCGTGCATCGGGTGA
GGTTTGACGGCACCAGTCATGAGGTTTTGGTACAGACAGGAGCACTTGAT
AACACCGCCCACCGCCGGGATATGACACGGTGGTGTGTGGGAATTGCATT
GGACCGGAAGAACGGACATGTGTATTGGACGCAGAAGGGGCCGAGTAAAG
GTGGGCAGGGGCAGATATTCCGTGCTGGTTTGGACGTGCCGGCTGGGCAG
ACGGTGGATAGTCGAGAGGATGTTGAATTGGTGTTGGAGGGATTGCCGGA
GCCGATTGATCTGGAGTTTGACGAGGAGGATGTGATGCTGTATTGGACCG
ATCGGGGGGAGCATCCGTGGGGTTGCTCATTGAATAGGGTCAAGGTTGTT
GGCGGTAAGGTGGTGGTGAAGTCGAGGGAGATTCTGGCAAGGCATTTTAA
TGAGCCTATTGGGTTGAAGGTGGATAGGAAGGGAAGAAAGGTGTATGTTG
CTGATCTGGGAGGGAGTATGTATTGTGTTGATTTGCAGAATGGGGAGAAG
AAGGTGATGTGGAGAGATGAGGGGTGTTATACTGGGGTTGCGTTGGTTAG
TGCAGCAGAGAGGGAGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:1304383..1306251+ >CAN33_38210-T1 ID=CAN33_38210-T1|Name=CAN33_38210-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1869bp|location=Sequence derived from alignment at NKJJ01000017.1:1304383..1306251+ (Aspergillus niger FDAARGOS_311)
ATGTGTACTACAAATACTACTATCACCCATCCCTCCAAATCCCGTCCTAT
CGTCATCATTGGCGCGGGCATTCTAGGTCGCCGCATCGCCGCCGTCTTCT
CATCTGCCGGCTATAGCGTGCACATCAGCGATCCATCGCCCTCTGCCCTT
GACTCTGCGAGAACTTACATCTCGACGCACATCCACGAATTCACTACCCA
TATCCCTCGTCCTTCTTTATCTCCGGGCCCAATCTCAACCTTTACCTCCG
TCCCCGAAGCAGTCGCCACAGCCTGGCTCATCGTCGAAGCCGTTCCTGAG
ATCCTGCCCATAAAGCAATCCCTCTTCGCAGACCTCCACGCCCACAGTCC
AGCGGACTGCATCCTTGCATCGAACAGCAGCAGTTACAAATCCCGTCTTA
TAGGCGGTCATCTACCACTGCCACGACGGGTCCTTCTTCTCAACATGCAT
TTCACTATGCCACCGGCTATCCGTACCGTGGAGCTAATGACCTGCGGGGA
TACGCACGAGCGGGTATTCCCCATGCTCAGTGGGGTGTTGAGTGAATGTG
GAGTTATCCCCGTGACGGCACGGAAAGAGTCCACGGGGTTTATCTTCAAT
CGTCTCTGGGCGGCGATTAAGCGTGAGATACTGATGATTCTGGCGGAGGG
AGTGAGTGAGCCAGCGGAGATTGATCTGTTGTGGAGGGAGATGTTCGGTA
GGAAGGAGAGTTTGCCGCCGTGTCGGTTGATGGATGCAGTTGGGCTGGAT
ACGGTGGCTGATATTGAGGAGAATTATGTGCGGGAGAGAAGACTGGATGG
ACAGTTGACGGTGGATTGGGTGAGGGAGAGGTTTGTGAGTGTTGGGAAGG
TCGGGAGGAAGGCTGAGGGATTGGGAGGGTTGTATCCTCCTGACTCTACT
GAGGACGTGAATGGGAAGACGGAGGGAAAAGGGCCTCTGCTCTATCTTCT
TGATGTTGGGTTGGGAGCAAATACACCTGATATCGAGAAGGTTTCTACCG
CTGGGAGGATACTGAAGTTCCAGCCGGGCACCACTGGCATGCCCGTCCCC
ATTATCACAGGCCAGTCTCTCCCCGATGGGATTGACGTGTCTCAGACGAT
AGGACGCATCTTCTGGACCAATATGGGGCAGTCGACATCCACGCACGACG
GATCCGTGCACTCGGCGACACTAGATGGCCAGGATATATGCACTTTACTT
CCAGCTGGGGCGGTGCATACGCCAAAGCAGCTTGTTGTCGACGACACAAC
GCAGCATGTGTATTTCTGTGATCGCGAAGGGATGAGCGTGCATCGGGTGA
GGTTTGACGGCACCAGTCATGAGGTTTTGGTACAGACAGGAGCACTTGAT
AACACCGCCCACCGCCGGGATATGACACGGTGGTGTGTGGGAATTGCATT
GGACCGGAAGAACGGACATGTGTATTGGACGCAGAAGGGGCCGAGTAAAG
GTGGGCAGGGGCAGATATTCCGTGCTGGTTTGGACGTGCCGGCTGGGCAG
ACGGTGGATAGTCGAGAGGATGTTGAATTGGTGTTGGAGGGATTGCCGGA
GCCGATTGATCTGGAGTTTGACGAGGAGGATGTGATGCTGTATTGGACCG
ATCGGGGGGAGCATCCGTGGGGTTGCTCATTGAATAGGGTCAAGGTTGTT
GGCGGTAAGGTGGTGGTGAAGTCGAGGGAGATTCTGGCAAGGCATTTTAA
TGAGCCTATTGGGTTGAAGGTGGATAGGAAGGGAAGAAAGGTGTATGTTG
CTGATCTGGGAGGGAGTATGTATTGTGTTGATTTGCAGAATGGGGAGAAG
AAGGTGATGTGGAGAGATGAGGGGTGTTATACTGGGGTTGCGTTGGTTAG
TGCAGCAGAGAGGGAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006631 | fatty acid metabolic process |
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity |
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR008927 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR006108 |
| DBxref | InterPro:IPR006176 |
| DBxref | InterPro:IPR013328 |
| DBxref | InterPro:IPR011042 |
| DBxref | InterPro:IPR000033 |
| DBxref | PFAM:PF02737 |
| DBxref | PFAM:PF00725 |
| Product | 3-hydroxyacyl-CoA dehydrogenase NAD binding domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:1304383..1306251 + |
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