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CAN33_38495-T1, CAN33_38495-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_38495-T1
Unique NameCAN33_38495-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1489638..1490400+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_38495-T1 ID=CAN33_38495-T1|Name=CAN33_38495-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=763bp|location=Sequence derived from alignment at NKJJ01000017.1:1489638..1490400+ (Aspergillus niger FDAARGOS_311)
ATGGCCCAGGGCAAGGCTGGACGGAGGAGACGGTCGAGTAGTATCATCTA
CCAAGAGCCCCCGAATCCATTGAGCACACCAGCGACCAGGCTGCTCTGCC
CAATTTGAATGCGAACTGGGTCAACGCCAAGGGTGAGTAGTGGCCACCTC
CATCTCCTCCATTTCCCCCCCCATCATCACCACTCCGTCGCTGCAGAAGG
AGGGGTTCATGTTCCGGCGGGGGACTTGTAACCAACATATGTCCCCATGA
CATCCATGACACCCCCAGTGGCTGACCACGTTGTACTACCATTTAGGAGC
CTGGACCATCCACTTCGTTCTCATCATCGCCCTCAAGATCTTGTTCGACA
TCATTCCCGGTGTCTCGCAGGAGACTTCATGGACACTCACCAACATCAGC
TACATGTTCGGTTCTTTCCTCATGTTCCACTGGGTGCGGGGCATCCCTTT
TGAATTCAACGCCGGCGCGTACGACAACCTCAACATGTGGGAGCAGATCG
ACAATGGAGATCAGTATACGCCCACAAAGAAGTTCCTCCTCTGCGTGCCC
ATTTGTCTCTTCCTGCTTAGCACACATTATACCCACTACGACTTGACGTA
TTTCACCATCAATTTCCTTGCAACCCTGGGAGTTGTCATCCCGAAATTGC
CGTTTGTATGTATTATCCTTGCCTTCTGTGGTGGGGTGAGTCATGATTGC
TAACTGCTGTGTTAGTCGCACCGTCTGCGAATAGGTCTCTTCTCTGATAT
ACCCGAAGAGTAG
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1489638..1490400+

>CAN33_38495-T1 ID=CAN33_38495-T1|Name=CAN33_38495-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1956bp|location=Sequence derived from alignment at NKJJ01000017.1:1489638..1490400+ (Aspergillus niger FDAARGOS_311)
ATGGCCCAGGGCAAGGCTGGACGGAGGAGACGCGACCAGGCTGCTCTGCC
CAATTTGAATGCGAACTGGGTCAACGCCAAGGGAGCCTGGACCATCCACT
TCGTTCTCATCATCGCCCTCAAGATCTTGTTCGACATCATTCCCGGTGTC
TCGCAGGAGACTTCATGGACACTCACCAACATCAGCTACATGTTCGGTTC
TTTCCTCATGTTCCACTGGGTGCGGGGCATCCCTTTTGAATTCAACGCCG
GCGCGTACGACAACCTCAACATGTGGGAGCAGATCGACAATGGAGATCAG
TATACGCCCACAAAGAAGTTCCTCCTCTGCGTGCCCATTTGTCTCTTCCT
GCTTAGCACACATTATACCCACTACGACTTGACGTATTTCACCATCAATT
TCCTTGCAACCCTGGGAGTTGTCATCCCGAAATTGCCGTTTTCGCACCGT
CTGCGAATAGGTCTCTTCTCTGATATACCCGAAGAGTAGATGGCCCAGGG
CAAGGCTGGACGGAGGAGACGCGACCAGGCTGCTCTGCCCAATTTGAATG
CGAACTGGGTCAACGCCAAGGGAGCCTGGACCATCCACTTCGTTCTCATC
ATCGCCCTCAAGATCTTGTTCGACATCATTCCCGGTGTCTCGCAGGAGAC
TTCATGGACACTCACCAACATCAGCTACATGTTCGGTTCTTTCCTCATGT
TCCACTGGGTGCGGGGCATCCCTTTTGAATTCAACGCCGGCGCGTACGAC
AACCTCAACATGTGGGAGCAGATCGACAATGGAGATCAGTATACGCCCAC
AAAGAAGTTCCTCCTCTGCGTGCCCATTTGTCTCTTCCTGCTTAGCACAC
ATTATACCCACTACGACTTGACGTATTTCACCATCAATTTCCTTGCAACC
CTGGGAGTTGTCATCCCGAAATTGCCGTTTTCGCACCGTCTGCGAATAGG
TCTCTTCTCTGATATACCCGAAGAGTAGATGGCCCAGGGCAAGGCTGGAC
GGAGGAGACGCGACCAGGCTGCTCTGCCCAATTTGAATGCGAACTGGGTC
AACGCCAAGGGAGCCTGGACCATCCACTTCGTTCTCATCATCGCCCTCAA
GATCTTGTTCGACATCATTCCCGGTGTCTCGCAGGAGACTTCATGGACAC
TCACCAACATCAGCTACATGTTCGGTTCTTTCCTCATGTTCCACTGGGTG
CGGGGCATCCCTTTTGAATTCAACGCCGGCGCGTACGACAACCTCAACAT
GTGGGAGCAGATCGACAATGGAGATCAGTATACGCCCACAAAGAAGTTCC
TCCTCTGCGTGCCCATTTGTCTCTTCCTGCTTAGCACACATTATACCCAC
TACGACTTGACGTATTTCACCATCAATTTCCTTGCAACCCTGGGAGTTGT
CATCCCGAAATTGCCGTTTTCGCACCGTCTGCGAATAGGTCTCTTCTCTG
ATATACCCGAAGAGTAGATGGCCCAGGGCAAGGCTGGACGGAGGAGACGC
GACCAGGCTGCTCTGCCCAATTTGAATGCGAACTGGGTCAACGCCAAGGG
AGCCTGGACCATCCACTTCGTTCTCATCATCGCCCTCAAGATCTTGTTCG
ACATCATTCCCGGTGTCTCGCAGGAGACTTCATGGACACTCACCAACATC
AGCTACATGTTCGGTTCTTTCCTCATGTTCCACTGGGTGCGGGGCATCCC
TTTTGAATTCAACGCCGGCGCGTACGACAACCTCAACATGTGGGAGCAGA
TCGACAATGGAGATCAGTATACGCCCACAAAGAAGTTCCTCCTCTGCGTG
CCCATTTGTCTCTTCCTGCTTAGCACACATTATACCCACTACGACTTGAC
GTATTTCACCATCAATTTCCTTGCAACCCTGGGAGTTGTCATCCCGAAAT
TGCCGTTTTCGCACCGTCTGCGAATAGGTCTCTTCTCTGATATACCCGAA
GAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0005789endoplasmic reticulum membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ORM1CAN33_38495Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38495-T1.exon1CAN33_38495-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_38495-T1.exon2CAN33_38495-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_38495-T1.exon3CAN33_38495-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_38495-T1.exon4CAN33_38495-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38495-T1.cdsCAN33_38495-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38495-T1CAN33_38495-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09264F60
DBxrefInterPro:IPR007203
DBxrefPFAM:PF04061
Productsphingolipid homeostasis protein orm1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1489638..1490400 +
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