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CAN33_38545-T1, CAN33_38545-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_38545-T1
Unique NameCAN33_38545-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1523298..1524294+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_38545-T1 ID=CAN33_38545-T1|Name=CAN33_38545-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=997bp|location=Sequence derived from alignment at NKJJ01000017.1:1523298..1524294+ (Aspergillus niger FDAARGOS_311)
ATGGCGGCCACCCGTCTCACAATGAGGTCTTTCCTCGGTCTTCTCTTCCT
CCTGTTCGTCCAACTCACCTCCGCCCTGAAGTTCGACCTCTCTGCTGTGA
GCGGGAAGAACGAGCGATGTATACGCAACTTCGTTTTCAAGGACCAGCTT
GTGGTCGTCACCGCCATTGTGAGCGGAAACAAGGGTGATGGCCAGGTTGT
TAACATGCATGTATGTGGGAACTCACTCCATCGTCTTTTATGGTGATTGC
GGGAGGCACGCTGGTCGGGCCAGCTGTTGTGTTGTCCTCCGGTGTTCGAT
TCTATCTTGAGCTTCTGTCGCTCGCGAAGGAAAAGGATGTACTTGGGCTA
ACTAGCTTTCTCTTTTCTGAAATAGATCAAGGATGCGCTGGGCAATGACC
ACGGTCGTCCTAAGGACATTGCCGGAGAGACTCGTCAGGCCTTCACTTCT
CCCGCCGATACTGCTTTCGACGTTTGCTTTGACAACCAGCTTACCACTCG
TCGTATGTTTATCTACCTTGATCATGTTGTATCTTGATATATCAGGGATA
TCAGGTGCTGTGTGATGTGCGTGTGTATGTGGTACTAACCAGACGCCAAA
TAGACGCCGTTGCCAACCCCTACAAGTCCATCGAGCTCGATGTCGACATT
GGTGCCGATGCCCGTGACTGGTCTAGCATTCAGGTTCAGGAGAAGCTCAA
GCCTGTTGAGACCGACCTCCGCCGTATCGAAGAGATGGTGGCCGAGATTG
TCAGCGAGATGGAGTACCTGCGCGCTCGTGAGCAGAAGCTGCGTGATACC
AACGAGAGCACGAACGAGCGTGTGAAGTGGTTCGCTTTCGGTACTATGGG
TATGCTGGTTGGATTGGGTGCTTGGCAGGTCGTGTATCTGAGGGCTTACT
TCAGGTATGTTCTTTTCTATCGCTCCTTCCGTTGGGTCTGGTATCTGGGT
AATGTGGCTAACAGCTTTGGATTTGTAGATCCAAGCACCTTATCTAG
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1523298..1524294+

>CAN33_38545-T1 ID=CAN33_38545-T1|Name=CAN33_38545-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2628bp|location=Sequence derived from alignment at NKJJ01000017.1:1523298..1524294+ (Aspergillus niger FDAARGOS_311)
ATGGCGGCCACCCGTCTCACAATGAGGTCTTTCCTCGGTCTTCTCTTCCT
CCTGTTCGTCCAACTCACCTCCGCCCTGAAGTTCGACCTCTCTGCTGTGA
GCGGGAAGAACGAGCGATGTATACGCAACTTCGTTTTCAAGGACCAGCTT
GTGGTCGTCACCGCCATTGTGAGCGGAAACAAGGGTGATGGCCAGGTTGT
TAACATGCATATCAAGGATGCGCTGGGCAATGACCACGGTCGTCCTAAGG
ACATTGCCGGAGAGACTCGTCAGGCCTTCACTTCTCCCGCCGATACTGCT
TTCGACGTTTGCTTTGACAACCAGCTTACCACTCGTCACGCCGTTGCCAA
CCCCTACAAGTCCATCGAGCTCGATGTCGACATTGGTGCCGATGCCCGTG
ACTGGTCTAGCATTCAGGTTCAGGAGAAGCTCAAGCCTGTTGAGACCGAC
CTCCGCCGTATCGAAGAGATGGTGGCCGAGATTGTCAGCGAGATGGAGTA
CCTGCGCGCTCGTGAGCAGAAGCTGCGTGATACCAACGAGAGCACGAACG
AGCGTGTGAAGTGGTTCGCTTTCGGTACTATGGGTATGCTGGTTGGATTG
GGTGCTTGGCAGGTCGTGTATCTGAGGGCTTACTTCAGATCCAAGCACCT
TATCTAGATGGCGGCCACCCGTCTCACAATGAGGTCTTTCCTCGGTCTTC
TCTTCCTCCTGTTCGTCCAACTCACCTCCGCCCTGAAGTTCGACCTCTCT
GCTGTGAGCGGGAAGAACGAGCGATGTATACGCAACTTCGTTTTCAAGGA
CCAGCTTGTGGTCGTCACCGCCATTGTGAGCGGAAACAAGGGTGATGGCC
AGGTTGTTAACATGCATATCAAGGATGCGCTGGGCAATGACCACGGTCGT
CCTAAGGACATTGCCGGAGAGACTCGTCAGGCCTTCACTTCTCCCGCCGA
TACTGCTTTCGACGTTTGCTTTGACAACCAGCTTACCACTCGTCACGCCG
TTGCCAACCCCTACAAGTCCATCGAGCTCGATGTCGACATTGGTGCCGAT
GCCCGTGACTGGTCTAGCATTCAGGTTCAGGAGAAGCTCAAGCCTGTTGA
GACCGACCTCCGCCGTATCGAAGAGATGGTGGCCGAGATTGTCAGCGAGA
TGGAGTACCTGCGCGCTCGTGAGCAGAAGCTGCGTGATACCAACGAGAGC
ACGAACGAGCGTGTGAAGTGGTTCGCTTTCGGTACTATGGGTATGCTGGT
TGGATTGGGTGCTTGGCAGGTCGTGTATCTGAGGGCTTACTTCAGATCCA
AGCACCTTATCTAGATGGCGGCCACCCGTCTCACAATGAGGTCTTTCCTC
GGTCTTCTCTTCCTCCTGTTCGTCCAACTCACCTCCGCCCTGAAGTTCGA
CCTCTCTGCTGTGAGCGGGAAGAACGAGCGATGTATACGCAACTTCGTTT
TCAAGGACCAGCTTGTGGTCGTCACCGCCATTGTGAGCGGAAACAAGGGT
GATGGCCAGGTTGTTAACATGCATATCAAGGATGCGCTGGGCAATGACCA
CGGTCGTCCTAAGGACATTGCCGGAGAGACTCGTCAGGCCTTCACTTCTC
CCGCCGATACTGCTTTCGACGTTTGCTTTGACAACCAGCTTACCACTCGT
CACGCCGTTGCCAACCCCTACAAGTCCATCGAGCTCGATGTCGACATTGG
TGCCGATGCCCGTGACTGGTCTAGCATTCAGGTTCAGGAGAAGCTCAAGC
CTGTTGAGACCGACCTCCGCCGTATCGAAGAGATGGTGGCCGAGATTGTC
AGCGAGATGGAGTACCTGCGCGCTCGTGAGCAGAAGCTGCGTGATACCAA
CGAGAGCACGAACGAGCGTGTGAAGTGGTTCGCTTTCGGTACTATGGGTA
TGCTGGTTGGATTGGGTGCTTGGCAGGTCGTGTATCTGAGGGCTTACTTC
AGATCCAAGCACCTTATCTAGATGGCGGCCACCCGTCTCACAATGAGGTC
TTTCCTCGGTCTTCTCTTCCTCCTGTTCGTCCAACTCACCTCCGCCCTGA
AGTTCGACCTCTCTGCTGTGAGCGGGAAGAACGAGCGATGTATACGCAAC
TTCGTTTTCAAGGACCAGCTTGTGGTCGTCACCGCCATTGTGAGCGGAAA
CAAGGGTGATGGCCAGGTTGTTAACATGCATATCAAGGATGCGCTGGGCA
ATGACCACGGTCGTCCTAAGGACATTGCCGGAGAGACTCGTCAGGCCTTC
ACTTCTCCCGCCGATACTGCTTTCGACGTTTGCTTTGACAACCAGCTTAC
CACTCGTCACGCCGTTGCCAACCCCTACAAGTCCATCGAGCTCGATGTCG
ACATTGGTGCCGATGCCCGTGACTGGTCTAGCATTCAGGTTCAGGAGAAG
CTCAAGCCTGTTGAGACCGACCTCCGCCGTATCGAAGAGATGGTGGCCGA
GATTGTCAGCGAGATGGAGTACCTGCGCGCTCGTGAGCAGAAGCTGCGTG
ATACCAACGAGAGCACGAACGAGCGTGTGAAGTGGTTCGCTTTCGGTACT
ATGGGTATGCTGGTTGGATTGGGTGCTTGGCAGGTCGTGTATCTGAGGGC
TTACTTCAGATCCAAGCACCTTATCTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ERV25CAN33_38545Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38545-T1.exon1CAN33_38545-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_38545-T1.exon2CAN33_38545-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_38545-T1.exon3CAN33_38545-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_38545-T1.exon4CAN33_38545-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38545-T1.cdsCAN33_38545-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38545-T1CAN33_38545-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-25)
DBxrefInterPro:IPR009038
DBxrefPFAM:PF01105
Productvesicle coat component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1523298..1524294 +
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