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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:50125..50980+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_3855-T1 ID=CAN33_3855-T1|Name=CAN33_3855-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=856bp|location=Sequence derived from alignment at NKJJ01000019.1:50125..50980+ (Aspergillus niger FDAARGOS_311)
ATGCTGCCTCTCACCGGTCGCGCCATTCCAGGCGCCATCCCAAACGCTCT
TCATGGTAAGTGTTCTCCTCATTGTTACCACTAAGTTGCTAAAGTCAGGT
AGTGCGACCGCGTATCACATCTTGCCAATTCCGAATCCAGCCAGTTTCAT
TCCTTTCGTCCTCTTCAGTCAAGTCGGCAACAGCAATCGAACAGCGGGGA
CAGTCTGGCCAAGCACTCACTGCTTCTGGAAAGGTGCGGAAAGAGGTGCC
CTTGCCGAGCCAGGAGAAAAAGGAGGGTGCTATGCAATATGTCCTGTTCG
TTACCTGAGACGCATGAGACGAATATCTTTTGTACTGATTCATCTGTAGT
ACCACGCTTGACCAAGTCGCTAACTGGGCACGCCAAAGTTCTTTGTGGCC
TATGACTTTTGGCCTCGCCTGTTGTGCAGTTGAGATGATGCATCTTTCGA
CCCCCAGATATGACCAGGATCGTCTAGGAATCATTTTCAGAGCGTCACCG
CGGCAATCGGATGTGATGATCGTGGCAGGCACATTGACAAATAAGATGGC
TCCCGCTCTCAGACAGGTGTATGACCAAATGCCTGACCCTCGTTGGGTTG
TCAGTATGGGGAGTTGCGCAAATGGTGGTGGTTATTACCATTACAGTTAT
TCTGTTGTTCGCGGATGCGACAGAATTGTACCCGTGGATGTCTACGTTCC
CGGATGTTCGTATACCCTTCATCATCTCTGCAGTAACGGCGGCTAACGGG
AACAACTCAAGGTCCGCCAACCTCCGAAGCATTGATGTACGGCATCTTTC
AACTTCAAAAGAAGATGCGGCACACAAGGATCACCCGCATGTGGTATCGC
CGTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:50125..50980+ >CAN33_3855-T1 ID=CAN33_3855-T1|Name=CAN33_3855-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2796bp|location=Sequence derived from alignment at NKJJ01000019.1:50125..50980+ (Aspergillus niger FDAARGOS_311)
ATGCTGCCTCTCACCGGTCGCGCCATTCCAGGCGCCATCCCAAACGCTCT
TCATGTGCGACCGCGTATCACATCTTGCCAATTCCGAATCCAGCCAGTTT
CATTCCTTTCGTCCTCTTCAGTCAAGTCGGCAACAGCAATCGAACAGCGG
GGACAGTCTGGCCAAGCACTCACTGCTTCTGGAAAGGTGCGGAAAGAGGT
GCCCTTGCCGAGCCAGGAGAAAAAGGAGGGTGCTATGCAATATGTCCTTA
CCACGCTTGACCAAGTCGCTAACTGGGCACGCCAAAGTTCTTTGTGGCCT
ATGACTTTTGGCCTCGCCTGTTGTGCAGTTGAGATGATGCATCTTTCGAC
CCCCAGATATGACCAGGATCGTCTAGGAATCATTTTCAGAGCGTCACCGC
GGCAATCGGATGTGATGATCGTGGCAGGCACATTGACAAATAAGATGGCT
CCCGCTCTCAGACAGGTGTATGACCAAATGCCTGACCCTCGTTGGGTTGT
CAGTATGGGGAGTTGCGCAAATGGTGGTGGTTATTACCATTACAGTTATT
CTGTTGTTCGCGGATGCGACAGAATTGTACCCGTGGATGTCTACGTTCCC
GGATGTCCGCCAACCTCCGAAGCATTGATGTACGGCATCTTTCAACTTCA
AAAGAAGATGCGGCACACAAGGATCACCCGCATGTGGTATCGCCGTTAAA
TGCTGCCTCTCACCGGTCGCGCCATTCCAGGCGCCATCCCAAACGCTCTT
CATGTGCGACCGCGTATCACATCTTGCCAATTCCGAATCCAGCCAGTTTC
ATTCCTTTCGTCCTCTTCAGTCAAGTCGGCAACAGCAATCGAACAGCGGG
GACAGTCTGGCCAAGCACTCACTGCTTCTGGAAAGGTGCGGAAAGAGGTG
CCCTTGCCGAGCCAGGAGAAAAAGGAGGGTGCTATGCAATATGTCCTTAC
CACGCTTGACCAAGTCGCTAACTGGGCACGCCAAAGTTCTTTGTGGCCTA
TGACTTTTGGCCTCGCCTGTTGTGCAGTTGAGATGATGCATCTTTCGACC
CCCAGATATGACCAGGATCGTCTAGGAATCATTTTCAGAGCGTCACCGCG
GCAATCGGATGTGATGATCGTGGCAGGCACATTGACAAATAAGATGGCTC
CCGCTCTCAGACAGGTGTATGACCAAATGCCTGACCCTCGTTGGGTTGTC
AGTATGGGGAGTTGCGCAAATGGTGGTGGTTATTACCATTACAGTTATTC
TGTTGTTCGCGGATGCGACAGAATTGTACCCGTGGATGTCTACGTTCCCG
GATGTCCGCCAACCTCCGAAGCATTGATGTACGGCATCTTTCAACTTCAA
AAGAAGATGCGGCACACAAGGATCACCCGCATGTGGTATCGCCGTTAAAT
GCTGCCTCTCACCGGTCGCGCCATTCCAGGCGCCATCCCAAACGCTCTTC
ATGTGCGACCGCGTATCACATCTTGCCAATTCCGAATCCAGCCAGTTTCA
TTCCTTTCGTCCTCTTCAGTCAAGTCGGCAACAGCAATCGAACAGCGGGG
ACAGTCTGGCCAAGCACTCACTGCTTCTGGAAAGGTGCGGAAAGAGGTGC
CCTTGCCGAGCCAGGAGAAAAAGGAGGGTGCTATGCAATATGTCCTTACC
ACGCTTGACCAAGTCGCTAACTGGGCACGCCAAAGTTCTTTGTGGCCTAT
GACTTTTGGCCTCGCCTGTTGTGCAGTTGAGATGATGCATCTTTCGACCC
CCAGATATGACCAGGATCGTCTAGGAATCATTTTCAGAGCGTCACCGCGG
CAATCGGATGTGATGATCGTGGCAGGCACATTGACAAATAAGATGGCTCC
CGCTCTCAGACAGGTGTATGACCAAATGCCTGACCCTCGTTGGGTTGTCA
GTATGGGGAGTTGCGCAAATGGTGGTGGTTATTACCATTACAGTTATTCT
GTTGTTCGCGGATGCGACAGAATTGTACCCGTGGATGTCTACGTTCCCGG
ATGTCCGCCAACCTCCGAAGCATTGATGTACGGCATCTTTCAACTTCAAA
AGAAGATGCGGCACACAAGGATCACCCGCATGTGGTATCGCCGTTAAATG
CTGCCTCTCACCGGTCGCGCCATTCCAGGCGCCATCCCAAACGCTCTTCA
TGTGCGACCGCGTATCACATCTTGCCAATTCCGAATCCAGCCAGTTTCAT
TCCTTTCGTCCTCTTCAGTCAAGTCGGCAACAGCAATCGAACAGCGGGGA
CAGTCTGGCCAAGCACTCACTGCTTCTGGAAAGGTGCGGAAAGAGGTGCC
CTTGCCGAGCCAGGAGAAAAAGGAGGGTGCTATGCAATATGTCCTTACCA
CGCTTGACCAAGTCGCTAACTGGGCACGCCAAAGTTCTTTGTGGCCTATG
ACTTTTGGCCTCGCCTGTTGTGCAGTTGAGATGATGCATCTTTCGACCCC
CAGATATGACCAGGATCGTCTAGGAATCATTTTCAGAGCGTCACCGCGGC
AATCGGATGTGATGATCGTGGCAGGCACATTGACAAATAAGATGGCTCCC
GCTCTCAGACAGGTGTATGACCAAATGCCTGACCCTCGTTGGGTTGTCAG
TATGGGGAGTTGCGCAAATGGTGGTGGTTATTACCATTACAGTTATTCTG
TTGTTCGCGGATGCGACAGAATTGTACCCGTGGATGTCTACGTTCCCGGA
TGTCCGCCAACCTCCGAAGCATTGATGTACGGCATCTTTCAACTTCAAAA
GAAGATGCGGCACACAAGGATCACCCGCATGTGGTATCGCCGTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051536 | iron-sulfur cluster binding |
| GO:0008137 | NADH dehydrogenase (ubiquinone) activity |
| GO:0051539 | 4 iron, 4 sulfur cluster binding |
| GO:0048038 | quinone binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006137 |
| DBxref | InterPro:IPR006138 |
| DBxref | PFAM:PF01058 |
| Product | NADH-quinone oxidoreductase B subunit family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:50125..50980 + |
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