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CAN33_38555-T1, CAN33_38555-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_38555-T1
Unique NameCAN33_38555-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1526407..1527998+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_38555-T1 ID=CAN33_38555-T1|Name=CAN33_38555-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1592bp|location=Sequence derived from alignment at NKJJ01000017.1:1526407..1527998+ (Aspergillus niger FDAARGOS_311)
ATGGCTGAGCAGCTCGTCCTTCGCGGTACCCTTGAGGGTCACAATGGCTG
GGTTACCTGCCTGGCTACCTCTCTGGAGAAGTAAGGCAACACTACACTAC
ACCGAATTGAAGACATGAAACAAATGCGTTTTGTTGCGAAAATCGAACAA
GGTGTGCATGTGCTACCGAACAAGTGGTATATGGATGCATTGTTGCGAGA
AAAGAAAATGATCGCATTGGTTGAAACATGAAATATTCATATATCAAATG
GACAAAACTGGGTTCTGACTTTATGTTTTTCTTCCTCGATTATAGCCCCA
ACATGCTGCTCTCTGGCAGTCGCGACAAGACCCTGATCATCTGGAACCTG
ACCCGCGACGAGCAGGCCTACGGTTACCCCAAGCGCAGCCTTGAGGGTCA
CTCTCACATCGTCTCTGACTGTGTATGCCCTCCGAATTACTCCGTCCCCA
CCATGTCCCAGTCCAGACAAGAAAAGACTTTCCCCACAGACGAAGGACGA
AGCCCGATCGAAACCTACGAGAAGGCGGGACTGGGCAAAGAATAAAAAGG
AAGATGATTTGGCTGACCGTGCATGGGGATTTATAGGTGATCTCCTCCGA
CGGTGCCTACGCTCTGTCCTCCTCCTGGGACAAGTCCCTCCGCCTGTGGG
AGCTCTCCACTGGTGAGACCACCCGGACCTTCGTCGGCCACACCAACGAC
GTCCTCTCCGTTTCTTTCTCCGCCGACAACCGCCAGATTGTCTCCGCTTC
CCGTGACCGCTCCATCAAGCTCTGGAACACCCTTGGTGACTGCAAGTTCA
CCATCACCGACAAGGGCCACACCGAGTGGGTTTCCTGCGTTCGCTTCAGC
CCCAACCCCCAGAACCCCGTCATCGTCTCCGCTGGTTGGGACAAGCTCGT
CAAGGTACGTTATGACTCGACTCTCGCATACCCAAGTTTATATCATTCGC
AATCTCGACACGTCCAGAAGATGTTTTTGCATAAACGTATTTGCTACTTC
AGAGCCTTTCACGGCCATGAGACAAACATTCACCAATGCCCTGATGGACA
ATCGATAAACATATCTTGTTTATGTTGTTATTGCTTTTATTGCTTTTCCA
CCGAGAACTTCAACTTGAAGAATCTTATTTCTGTGGAGTCATGAAGCTAA
CATGCAAAACAACTAGGTTTGGGAGCTCGCTTCCTGCCGTCTCCAGACCG
ACCACATCGGTCACACCGGCTACATCAACGCCGTCACCATCTCCCCCGAT
GGATCCCTCTGCGCCTCCGGTGGCAAGGACGGCACCACCATGCTCTGGGA
CCTTAACGAGTCCAAGCACCTCTACTCCCTCCACGCCGGTGACGAGATCC
ACGCCCTCGTCTTCTCCCCCAACCGTTACTGGCTCTGCGCTGCCACCTCC
AGCAGCATCACCATCTTCGACCTCGAGAAGAAGAGCAAGGTTGACGAGCT
CAAGCCCGAGTACATCGAGAAGGGCAAGAAGAGCCGCGAGCCCGAGTGTG
TCAGCTTGGCCTGGAGCGCTGACGGCCAGACTCTGTTCGCTGGTTACACC
GACAACAAGATCCGCGCTTGGGGTGTCATGTCGAGGGCATAG
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1526407..1527998+

>CAN33_38555-T1 ID=CAN33_38555-T1|Name=CAN33_38555-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3804bp|location=Sequence derived from alignment at NKJJ01000017.1:1526407..1527998+ (Aspergillus niger FDAARGOS_311)
ATGGCTGAGCAGCTCGTCCTTCGCGGTACCCTTGAGGGTCACAATGGCTG
GGTTACCTGCCTGGCTACCTCTCTGGAGAACCCCAACATGCTGCTCTCTG
GCAGTCGCGACAAGACCCTGATCATCTGGAACCTGACCCGCGACGAGCAG
GCCTACGGTTACCCCAAGCGCAGCCTTGAGGGTCACTCTCACATCGTCTC
TGACTGTGTGATCTCCTCCGACGGTGCCTACGCTCTGTCCTCCTCCTGGG
ACAAGTCCCTCCGCCTGTGGGAGCTCTCCACTGGTGAGACCACCCGGACC
TTCGTCGGCCACACCAACGACGTCCTCTCCGTTTCTTTCTCCGCCGACAA
CCGCCAGATTGTCTCCGCTTCCCGTGACCGCTCCATCAAGCTCTGGAACA
CCCTTGGTGACTGCAAGTTCACCATCACCGACAAGGGCCACACCGAGTGG
GTTTCCTGCGTTCGCTTCAGCCCCAACCCCCAGAACCCCGTCATCGTCTC
CGCTGGTTGGGACAAGCTCGTCAAGGTTTGGGAGCTCGCTTCCTGCCGTC
TCCAGACCGACCACATCGGTCACACCGGCTACATCAACGCCGTCACCATC
TCCCCCGATGGATCCCTCTGCGCCTCCGGTGGCAAGGACGGCACCACCAT
GCTCTGGGACCTTAACGAGTCCAAGCACCTCTACTCCCTCCACGCCGGTG
ACGAGATCCACGCCCTCGTCTTCTCCCCCAACCGTTACTGGCTCTGCGCT
GCCACCTCCAGCAGCATCACCATCTTCGACCTCGAGAAGAAGAGCAAGGT
TGACGAGCTCAAGCCCGAGTACATCGAGAAGGGCAAGAAGAGCCGCGAGC
CCGAGTGTGTCAGCTTGGCCTGGAGCGCTGACGGCCAGACTCTGTTCGCT
GGTTACACCGACAACAAGATCCGCGCTTGGGGTGTCATGTCGAGGGCATA
GATGGCTGAGCAGCTCGTCCTTCGCGGTACCCTTGAGGGTCACAATGGCT
GGGTTACCTGCCTGGCTACCTCTCTGGAGAACCCCAACATGCTGCTCTCT
GGCAGTCGCGACAAGACCCTGATCATCTGGAACCTGACCCGCGACGAGCA
GGCCTACGGTTACCCCAAGCGCAGCCTTGAGGGTCACTCTCACATCGTCT
CTGACTGTGTGATCTCCTCCGACGGTGCCTACGCTCTGTCCTCCTCCTGG
GACAAGTCCCTCCGCCTGTGGGAGCTCTCCACTGGTGAGACCACCCGGAC
CTTCGTCGGCCACACCAACGACGTCCTCTCCGTTTCTTTCTCCGCCGACA
ACCGCCAGATTGTCTCCGCTTCCCGTGACCGCTCCATCAAGCTCTGGAAC
ACCCTTGGTGACTGCAAGTTCACCATCACCGACAAGGGCCACACCGAGTG
GGTTTCCTGCGTTCGCTTCAGCCCCAACCCCCAGAACCCCGTCATCGTCT
CCGCTGGTTGGGACAAGCTCGTCAAGGTTTGGGAGCTCGCTTCCTGCCGT
CTCCAGACCGACCACATCGGTCACACCGGCTACATCAACGCCGTCACCAT
CTCCCCCGATGGATCCCTCTGCGCCTCCGGTGGCAAGGACGGCACCACCA
TGCTCTGGGACCTTAACGAGTCCAAGCACCTCTACTCCCTCCACGCCGGT
GACGAGATCCACGCCCTCGTCTTCTCCCCCAACCGTTACTGGCTCTGCGC
TGCCACCTCCAGCAGCATCACCATCTTCGACCTCGAGAAGAAGAGCAAGG
TTGACGAGCTCAAGCCCGAGTACATCGAGAAGGGCAAGAAGAGCCGCGAG
CCCGAGTGTGTCAGCTTGGCCTGGAGCGCTGACGGCCAGACTCTGTTCGC
TGGTTACACCGACAACAAGATCCGCGCTTGGGGTGTCATGTCGAGGGCAT
AGATGGCTGAGCAGCTCGTCCTTCGCGGTACCCTTGAGGGTCACAATGGC
TGGGTTACCTGCCTGGCTACCTCTCTGGAGAACCCCAACATGCTGCTCTC
TGGCAGTCGCGACAAGACCCTGATCATCTGGAACCTGACCCGCGACGAGC
AGGCCTACGGTTACCCCAAGCGCAGCCTTGAGGGTCACTCTCACATCGTC
TCTGACTGTGTGATCTCCTCCGACGGTGCCTACGCTCTGTCCTCCTCCTG
GGACAAGTCCCTCCGCCTGTGGGAGCTCTCCACTGGTGAGACCACCCGGA
CCTTCGTCGGCCACACCAACGACGTCCTCTCCGTTTCTTTCTCCGCCGAC
AACCGCCAGATTGTCTCCGCTTCCCGTGACCGCTCCATCAAGCTCTGGAA
CACCCTTGGTGACTGCAAGTTCACCATCACCGACAAGGGCCACACCGAGT
GGGTTTCCTGCGTTCGCTTCAGCCCCAACCCCCAGAACCCCGTCATCGTC
TCCGCTGGTTGGGACAAGCTCGTCAAGGTTTGGGAGCTCGCTTCCTGCCG
TCTCCAGACCGACCACATCGGTCACACCGGCTACATCAACGCCGTCACCA
TCTCCCCCGATGGATCCCTCTGCGCCTCCGGTGGCAAGGACGGCACCACC
ATGCTCTGGGACCTTAACGAGTCCAAGCACCTCTACTCCCTCCACGCCGG
TGACGAGATCCACGCCCTCGTCTTCTCCCCCAACCGTTACTGGCTCTGCG
CTGCCACCTCCAGCAGCATCACCATCTTCGACCTCGAGAAGAAGAGCAAG
GTTGACGAGCTCAAGCCCGAGTACATCGAGAAGGGCAAGAAGAGCCGCGA
GCCCGAGTGTGTCAGCTTGGCCTGGAGCGCTGACGGCCAGACTCTGTTCG
CTGGTTACACCGACAACAAGATCCGCGCTTGGGGTGTCATGTCGAGGGCA
TAGATGGCTGAGCAGCTCGTCCTTCGCGGTACCCTTGAGGGTCACAATGG
CTGGGTTACCTGCCTGGCTACCTCTCTGGAGAACCCCAACATGCTGCTCT
CTGGCAGTCGCGACAAGACCCTGATCATCTGGAACCTGACCCGCGACGAG
CAGGCCTACGGTTACCCCAAGCGCAGCCTTGAGGGTCACTCTCACATCGT
CTCTGACTGTGTGATCTCCTCCGACGGTGCCTACGCTCTGTCCTCCTCCT
GGGACAAGTCCCTCCGCCTGTGGGAGCTCTCCACTGGTGAGACCACCCGG
ACCTTCGTCGGCCACACCAACGACGTCCTCTCCGTTTCTTTCTCCGCCGA
CAACCGCCAGATTGTCTCCGCTTCCCGTGACCGCTCCATCAAGCTCTGGA
ACACCCTTGGTGACTGCAAGTTCACCATCACCGACAAGGGCCACACCGAG
TGGGTTTCCTGCGTTCGCTTCAGCCCCAACCCCCAGAACCCCGTCATCGT
CTCCGCTGGTTGGGACAAGCTCGTCAAGGTTTGGGAGCTCGCTTCCTGCC
GTCTCCAGACCGACCACATCGGTCACACCGGCTACATCAACGCCGTCACC
ATCTCCCCCGATGGATCCCTCTGCGCCTCCGGTGGCAAGGACGGCACCAC
CATGCTCTGGGACCTTAACGAGTCCAAGCACCTCTACTCCCTCCACGCCG
GTGACGAGATCCACGCCCTCGTCTTCTCCCCCAACCGTTACTGGCTCTGC
GCTGCCACCTCCAGCAGCATCACCATCTTCGACCTCGAGAAGAAGAGCAA
GGTTGACGAGCTCAAGCCCGAGTACATCGAGAAGGGCAAGAAGAGCCGCG
AGCCCGAGTGTGTCAGCTTGGCCTGGAGCGCTGACGGCCAGACTCTGTTC
GCTGGTTACACCGACAACAAGATCCGCGCTTGGGGTGTCATGTCGAGGGC
ATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CPC2CAN33_38555Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38555-T1.exon1CAN33_38555-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_38555-T1.exon2CAN33_38555-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_38555-T1.exon3CAN33_38555-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_38555-T1.exon4CAN33_38555-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38555-T1.cdsCAN33_38555-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38555-T1CAN33_38555-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092636T6
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
Productcross-pathway control WD-repeat protein cpc2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1526407..1527998 +
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