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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:52246..54383+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_3860-T1 ID=CAN33_3860-T1|Name=CAN33_3860-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2138bp|location=Sequence derived from alignment at NKJJ01000019.1:52246..54383+ (Aspergillus niger FDAARGOS_311)
ATGTCAGGCGTGTACCGCGCCATGAAGAACCTCGTTCCCGATCACTCTGA
AGCTCTTTCTGAAGTCCAAACCCATGAACCGATTACTTCGTTCAAATCAG
GGTTGACGACTCCCTGGATTTTCCTCCAACCCACGACTGAGTTGAAAACT
ACTATCACTGGCTCTGTGAAGTACTATTTAGATTCGTTGGCTTCGTCGGT
CGGCGATTCCCAATGTGCACGCCAACGCAGGAATAGAAAGCGCAAAAGGT
CCGAAGTTGAGGAAAGTTCTACAAGCCAGGCCCTGCAGCTCAAGCAACTT
TATGTCGATGGCTTTACTTCTGACCAGATATGGCAACAAGCCCTGAGAAT
CCTTGATTCTTCAGGTGGTGAGGTTGAGCGGGATTTTACTTGGTGGTCTG
CAGTGTCCAAACCATACGACCCGCCCCTGACCTCAACTTATGATTTGGCT
CTTGATGACGCCGAATTAGAGGGCAGCAACCTCGACTCTCAGTCAGAGAC
CGATCTTACCCGATCGAGTATCGATGATGACGACCTTAGTTCAGTACACG
ATCACTCTGAAACCTCCCCCCACGATGATTCAGACGTCGAAGAAGACATT
GAAAAATTATCCGACAATATTCCCGGAAACGACATCGACGAAGGTGAACA
AGAAACGTATGTGGAGGATCCCTTCGGCTTGAATGATGGTTTCTTCTCGA
TAGATGATTTCAACAAGCAATCGGAACTACTCGAAAGACAAGACGTTAGT
GGTGGTCCAGACAATGATTTGAGAGCGAGGATGATGAAATCGATTGGCAC
GCAAATCCTCTTAGTACGACAGGGTCAATGTCTTTATCGAAGGGAGACAT
GCCACAGGAGAACTCTGACGGGAATGGTGACGAGAATATGTCTGACAGTG
AAGAGGAGGGACCAACATTTGGGGATGCAGGCCTTGAGGACGATTCCGAT
ATGGACGAAGATAATGTCTATGCCACAAACTCCGGAGGCGAAGGTTGGAT
AAACACTAGCGACATAAAGTATTCTGACTTCTTCGCGCCTCCTCCGCGTA
AAGTTACTCGCAAAAAGTCTCGCTCCCTTCCCAAAACTCAGCCTGATATT
GCTATTACCAACGACGACGTTGATCGTGCCATGGCTGATGTTCGCCGTGA
TCTCTTTGAAGACGAACCTTCCGGTGAAGACAGTGATGAACATGAAGTAG
CGCGAGGATCTCAGATCAATTATTCTAGTCATGAGAAGCAGCGTGCTCGC
ATTGCTGATGAGATTCGCCGTTTGGAGGCTGCAAACGTTGCCAAGAAGGA
TTGGATGCTAGCTGGTGAAGCCAGGGCTGTCGAAAGGCCTGTGAACTCGC
TTATTGAAGAAGACCTGGATTTCGAAAGAATCGGAAAGCCCGTGCCAGTC
GTCACAGCAGAGATGTCAGAGGATATTGAAGAGCTTATCAAGCGTCGGAT
TCTCGCCAAACAATTTGACGAAGTAATACGACGTCGCCCTGGTGTTTCCG
ACGCACTGAGCGCACGGGGAAGCCGTCCTGAATTGGAAGATACCAAACCC
CAGCAGAGTCTTGCTGAATTATATGAGGCCGACCATCTTCGTGCTACTGA
TCCAAACTTCGTTGACCCTAAAAATCAGAAGTTGATCCGCGAGCATGCTA
CTGTGACAAGTTTATGGAAAGAGATCAGCTCTCAATTAGACACGCTCTCA
AACTGGCATTACAAGCCCAAGGCTCCGCAGGCAAGCATCAATGTTGTCAC
CGATGTGGCAACAATTACTATGGAGGATGCTCAGCCGACAGCCAGCAACG
CTGTCAATGGGACGGCAACCCTTGCGCCGCAGGAGATCTACGCACCTGGC
GACGATAACAAAGTCGCTGGTGAAATGATTTTGAAGAATGGAACGGCAAT
CGCCAAAGAGGAAATGACCCGGGAACAAAAGGCTAAGTTGAGGCGAGAGC
ACAAGAAGCAAATCGCTAGCACCGCAAAATCTCAGAAGACAGGGAAAGCG
GCTGAGAAACAGCAGCTCATGTCGGACTTGAAGAAGGGTGGAGTCAAATT
GATTGGAAAGCAGGGCGAAGTGACGAATATCAATGGCGGTAAAATCAAAG
AAGGTGTGAAGGAAGGTGGCCATGTGCTCAAGCTTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:52246..54383+ >CAN33_3860-T1 ID=CAN33_3860-T1|Name=CAN33_3860-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4188bp|location=Sequence derived from alignment at NKJJ01000019.1:52246..54383+ (Aspergillus niger FDAARGOS_311)
ATGTCAGGCGTGTACCGCGCCATGAAGAACCTCGTTCCCGATCACTCTGA
AGCTCTTTCTGAAGTCCAAACCCATGAACCGATTACTTCGTTCAAATCAG
GGTTGACGACTCCCTGGATTTTCCTCCAACCCACGACTGAGTTGAAAACT
ACTATCACTGGCTCTGTGAAGTACTATTTAGATTCGTTGGCTTCGTCGGT
CGGCGATTCCCAATGTGCACGCCAACGCAGGAATAGAAAGCGCAAAAGGT
CCGAAGTTGAGGAAAGTTCTACAAGCCAGGCCCTGCAGCTCAAGCAACTT
TATGTCGATGGCTTTACTTCTGACCAGATATGGCAACAAGCCCTGAGAAT
CCTTGATTCTTCAGGTGGTGAGGTTGAGCGGGATTTTACTTGGTGGTCTG
CAGTGTCCAAACCATACGACCCGCCCCTGACCTCAACTTATGATTTGGCT
CTTGATGACGCCGAATTAGAGGGCAGCAACCTCGACTCTCAGTCAGAGAC
CGATCTTACCCGATCGAGTATCGATGATGACGACCTTAGTTCAGTACACG
ATCACTCTGAAACCTCCCCCCACGATGATTCAGACGTCGAAGAAGACATT
GAAAAATTATCCGACAATATTCCCGGAAACGACATCGACGAAGGTGAACA
AGAAACGTATGTGGAGGATCCCTTCGGCTTGAATGATGGTTTCTTCTCGA
TAGATGATTTCAACAAGCAATCGGAACTACTCGAAAGACAAGACGTTAGT
GGTGGTCCAGACAATGATTTGAGAGCGAGGATGATGAAATCGATTGGCAC
GCAAATCCTCTTAGAGAACTCTGACGGGAATGGTGACGAGAATATGTCTG
ACAGTGAAGAGGAGGGACCAACATTTGGGGATGCAGGCCTTGAGGACGAT
TCCGATATGGACGAAGATAATGTCTATGCCACAAACTCCGGAGGCGAAGG
TTGGATAAACACTAGCGACATAAAGTATTCTGACTTCTTCGCGCCTCCTC
CGCGTAAAGTTACTCGCAAAAAGTCTCGCTCCCTTCCCAAAACTCAGCCT
GATATTGCTATTACCAACGACGACGTTGATCGTGCCATGGCTGATGTTCG
CCGTGATCTCTTTGAAGACGAACCTTCCGGTGAAGACAGTGATGAACATG
AAGTAGCGCGAGGATCTCAGATCAATTATTCTAGTCATGAGAAGCAGCGT
GCTCGCATTGCTGATGAGATTCGCCGTTTGGAGGCTGCAAACGTTGCCAA
GAAGGATTGGATGCTAGCTGGTGAAGCCAGGGCTGTCGAAAGGCCTGTGA
ACTCGCTTATTGAAGAAGACCTGGATTTCGAAAGAATCGGAAAGCCCGTG
CCAGTCGTCACAGCAGAGATGTCAGAGGATATTGAAGAGCTTATCAAGCG
TCGGATTCTCGCCAAACAATTTGACGAAGTAATACGACGTCGCCCTGGTG
TTTCCGACGCACTGAGCGCACGGGGAAGCCGTCCTGAATTGGAAGATACC
AAACCCCAGCAGAGTCTTGCTGAATTATATGAGGCCGACCATCTTCGTGC
TACTGATCCAAACTTCGTTGACCCTAAAAATCAGAAGTTGATCCGCGAGC
ATGCTACTGTGACAAGTTTATGGAAAGAGATCAGCTCTCAATTAGACACG
CTCTCAAACTGGCATTACAAGCCCAAGGCTCCGCAGGCAAGCATCAATGT
TGTCACCGATGTGGCAACAATTACTATGGAGGATGCTCAGCCGACAGCCA
GCAACGCTGTCAATGGGACGGCAACCCTTGCGCCGCAGGAGATCTACGCA
CCTGGCGACGATAACAAAGTCGCTGGTGAAATGATTTTGAAGAATGGAAC
GGCAATCGCCAAAGAGGAAATGACCCGGGAACAAAAGGCTAAGTTGAGGC
GAGAGCACAAGAAGCAAATCGCTAGCACCGCAAAATCTCAGAAGACAGGG
AAAGCGGCTGAGAAACAGCAGCTCATGTCGGACTTGAAGAAGGGTGGAGT
CAAATTGATTGGAAAGCAGGGCGAAGTGACGAATATCAATGGCGGTAAAA
TCAAAGAAGGTGTGAAGGAAGGTGGCCATGTGCTCAAGCTTTAGATGTCA
GGCGTGTACCGCGCCATGAAGAACCTCGTTCCCGATCACTCTGAAGCTCT
TTCTGAAGTCCAAACCCATGAACCGATTACTTCGTTCAAATCAGGGTTGA
CGACTCCCTGGATTTTCCTCCAACCCACGACTGAGTTGAAAACTACTATC
ACTGGCTCTGTGAAGTACTATTTAGATTCGTTGGCTTCGTCGGTCGGCGA
TTCCCAATGTGCACGCCAACGCAGGAATAGAAAGCGCAAAAGGTCCGAAG
TTGAGGAAAGTTCTACAAGCCAGGCCCTGCAGCTCAAGCAACTTTATGTC
GATGGCTTTACTTCTGACCAGATATGGCAACAAGCCCTGAGAATCCTTGA
TTCTTCAGGTGGTGAGGTTGAGCGGGATTTTACTTGGTGGTCTGCAGTGT
CCAAACCATACGACCCGCCCCTGACCTCAACTTATGATTTGGCTCTTGAT
GACGCCGAATTAGAGGGCAGCAACCTCGACTCTCAGTCAGAGACCGATCT
TACCCGATCGAGTATCGATGATGACGACCTTAGTTCAGTACACGATCACT
CTGAAACCTCCCCCCACGATGATTCAGACGTCGAAGAAGACATTGAAAAA
TTATCCGACAATATTCCCGGAAACGACATCGACGAAGGTGAACAAGAAAC
GTATGTGGAGGATCCCTTCGGCTTGAATGATGGTTTCTTCTCGATAGATG
ATTTCAACAAGCAATCGGAACTACTCGAAAGACAAGACGTTAGTGGTGGT
CCAGACAATGATTTGAGAGCGAGGATGATGAAATCGATTGGCACGCAAAT
CCTCTTAGAGAACTCTGACGGGAATGGTGACGAGAATATGTCTGACAGTG
AAGAGGAGGGACCAACATTTGGGGATGCAGGCCTTGAGGACGATTCCGAT
ATGGACGAAGATAATGTCTATGCCACAAACTCCGGAGGCGAAGGTTGGAT
AAACACTAGCGACATAAAGTATTCTGACTTCTTCGCGCCTCCTCCGCGTA
AAGTTACTCGCAAAAAGTCTCGCTCCCTTCCCAAAACTCAGCCTGATATT
GCTATTACCAACGACGACGTTGATCGTGCCATGGCTGATGTTCGCCGTGA
TCTCTTTGAAGACGAACCTTCCGGTGAAGACAGTGATGAACATGAAGTAG
CGCGAGGATCTCAGATCAATTATTCTAGTCATGAGAAGCAGCGTGCTCGC
ATTGCTGATGAGATTCGCCGTTTGGAGGCTGCAAACGTTGCCAAGAAGGA
TTGGATGCTAGCTGGTGAAGCCAGGGCTGTCGAAAGGCCTGTGAACTCGC
TTATTGAAGAAGACCTGGATTTCGAAAGAATCGGAAAGCCCGTGCCAGTC
GTCACAGCAGAGATGTCAGAGGATATTGAAGAGCTTATCAAGCGTCGGAT
TCTCGCCAAACAATTTGACGAAGTAATACGACGTCGCCCTGGTGTTTCCG
ACGCACTGAGCGCACGGGGAAGCCGTCCTGAATTGGAAGATACCAAACCC
CAGCAGAGTCTTGCTGAATTATATGAGGCCGACCATCTTCGTGCTACTGA
TCCAAACTTCGTTGACCCTAAAAATCAGAAGTTGATCCGCGAGCATGCTA
CTGTGACAAGTTTATGGAAAGAGATCAGCTCTCAATTAGACACGCTCTCA
AACTGGCATTACAAGCCCAAGGCTCCGCAGGCAAGCATCAATGTTGTCAC
CGATGTGGCAACAATTACTATGGAGGATGCTCAGCCGACAGCCAGCAACG
CTGTCAATGGGACGGCAACCCTTGCGCCGCAGGAGATCTACGCACCTGGC
GACGATAACAAAGTCGCTGGTGAAATGATTTTGAAGAATGGAACGGCAAT
CGCCAAAGAGGAAATGACCCGGGAACAAAAGGCTAAGTTGAGGCGAGAGC
ACAAGAAGCAAATCGCTAGCACCGCAAAATCTCAGAAGACAGGGAAAGCG
GCTGAGAAACAGCAGCTCATGTCGGACTTGAAGAAGGGTGGAGTCAAATT
GATTGGAAAGCAGGGCGAAGTGACGAATATCAATGGCGGTAAAATCAAAG
AAGGTGTGAAGGAAGGTGGCCATGTGCTCAAGCTTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0034457 | Mpp10 complex |
| GO:0005634 | nucleus |
| GO:0005732 | small nucleolar ribonucleoprotein complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006364 | rRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263ROQ |
| DBxref | InterPro:IPR012173 |
| DBxref | PFAM:PF04006 |
| Product | Mpp10 protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:52246..54383 + |
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