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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:1589384..1590484- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_38655-T1 ID=CAN33_38655-T1|Name=CAN33_38655-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1101bp|location=Sequence derived from alignment at NKJJ01000017.1:1589384..1590484- (Aspergillus niger FDAARGOS_311)
ATGTCACAAAACACTACGACCACAGTACAGGAGCTACGCCTGGGCACCCG
CAATTCCAAACTGGCACTAGTACAAGCGGAGCATGTTTCCAAGGAGCTGA
CCAGTGCTCACCCCGGAGTCCAGTTTCCCTGGCAAACGGTGGTGGTGCGC
GGCGATGCCGACAAAAGTAGCCCTTTCCTGAAATTTGCAGGGCCATCCGA
CGCAGCAAAGAACATCTGGACCGAAGAGATGGAAACCAAGCTGTGCGCAG
GAGAGCTGGATCTCCTCGTGCATTGCCTCAAAGATATGCCGACGCGTCTA
CCAGAAACCTGCACACTAGGGGCCATTGTTTATCGGGAAGATCCCACTGA
TGCGTTGGTGATAAAGGAGGGGCTGCGGTCGCAGTATACGGATCTGAGTC
AACTGCCCCCCGGTTCTGTGGTGGGCACTAGTTCCACTAGACGGAAAGCC
CTACTTCGATACAGATACCCGCATTTGAAAGTGGAGGAATGCCGCGGGAA
CCTGTAAGAAGACTGCCCCTTTTTGTCACTGAGAGTTGACTCTTTTCTGA
CTTGACATGGCAGCGGAACACGGCTGAAAAAGCTAGATGACCCAGAAGGT
CCATTTTCGGCAATCATCCTGGCCACGGCCGGTATGGTCCGCATCAATCT
GGAAGATCGCATTACGAAACGCTTGCCTCCCTCGGAGTTCCCGTACGCTG
TCGGTCAGGGCGCCCTGGGCATTGAAATCCGCAAGGAGGACGCCCAGACA
AAGACCATGGTTCGAAAAATCGAAGACCTGGTTACCCGTCGGATCTGTCT
GGCAGAGCGGTCACTGCTACGCACTCTTCAGGGCGGCTGCTCGTCTCCAG
TCGCAGTACATTGCACTGTTGAGCAGGCACCAACAGCTTCCTCGCCAGCT
CAATTGCGACTAGATGGTACTATAATTCATCCCCACGGGACAACTTTGCT
ATCTGAACGGACGACAGCGGAAGTGGGAACGGACGAGGATGCCGAGGCGT
TGGGTGCTACGGTCGCTCAGCAATTGTTGAAGAATGGCGGACAAGCATTG
CTGGAAGAGATTCGTCTGTTACAAGAGACCATTGCGACAGATGCAAAATA
G back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:1589384..1590484- >CAN33_38655-T1 ID=CAN33_38655-T1|Name=CAN33_38655-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2970bp|location=Sequence derived from alignment at NKJJ01000017.1:1589384..1590484- (Aspergillus niger FDAARGOS_311)
CGGAAGTGGGAACGGACGAGGATGCCGAGGCGTTGGGTGCTACGGTCGCT
CAGCAATTGTTGAAGAATGGCGGACAAGCATTGCTGGAAGAGATTCGTCT
GTTACAAGAGACCATTGCGACAGATGCAAAATAGCGGAACACGGCTGAAA
AAGCTAGATGACCCAGAAGGTCCATTTTCGGCAATCATCCTGGCCACGGC
CGGTATGGTCCGCATCAATCTGGAAGATCGCATTACGAAACGCTTGCCTC
CCTCGGAGTTCCCGTACGCTGTCGGTCAGGGCGCCCTGGGCATTGAAATC
CGCAAGGAGGACGCCCAGACAAAGACCATGGTTCGAAAAATCGAAGACCT
GGTTACCCGTCGGATCTGTCTGGCAGAGCGGTCACTGCTACGCACTCTTC
AGGGCGGCTGCTCGTCTCCAGTCGCAGTACATTGCACTGTTGAGCAGGCA
CCAACAGCTTCCTCGCCAGCTCAATTGCGACTAGATGATGTCACAAAACA
CTACGACCACAGTACAGGAGCTACGCCTGGGCACCCGCAATTCCAAACTG
GCACTAGTACAAGCGGAGCATGTTTCCAAGGAGCTGACCAGTGCTCACCC
CGGAGTCCAGTTTCCCTGGCAAACGGTGGTGGTGCGCGGCGATGCCGACA
AAAGTAGCCCTTTCCTGAAATTTGCAGGGCCATCCGACGCAGCAAAGAAC
ATCTGGACCGAAGAGATGGAAACCAAGCTGTGCGCAGGAGAGCTGGATCT
CCTCGTGCATTGCCTCAAAGATATGCCGACGCGTCTACCAGAAACCTGCA
CACTAGGGGCCATTGTTTATCGGGAAGATCCCACTGATGCGTTGGTGATA
AAGGAGGGGCTGCGGTCGCAGTATACGGATCTGAGTCAACTGCCCCCCGG
TTCTGTGGTGGGCACTAGTTCCACTAGACGGAAAGCCCTACTTCGATACA
GATACCCGCATTTGAAAGTGGAGGAATGCCGCGGGAACCTCGGAAGTGGG
AACGGACGAGGATGCCGAGGCGTTGGGTGCTACGGTCGCTCAGCAATTGT
TGAAGAATGGCGGACAAGCATTGCTGGAAGAGATTCGTCTGTTACAAGAG
ACCATTGCGACAGATGCAAAATAGCGGAACACGGCTGAAAAAGCTAGATG
ACCCAGAAGGTCCATTTTCGGCAATCATCCTGGCCACGGCCGGTATGGTC
CGCATCAATCTGGAAGATCGCATTACGAAACGCTTGCCTCCCTCGGAGTT
CCCGTACGCTGTCGGTCAGGGCGCCCTGGGCATTGAAATCCGCAAGGAGG
ACGCCCAGACAAAGACCATGGTTCGAAAAATCGAAGACCTGGTTACCCGT
CGGATCTGTCTGGCAGAGCGGTCACTGCTACGCACTCTTCAGGGCGGCTG
CTCGTCTCCAGTCGCAGTACATTGCACTGTTGAGCAGGCACCAACAGCTT
CCTCGCCAGCTCAATTGCGACTAGATGATGTCACAAAACACTACGACCAC
AGTACAGGAGCTACGCCTGGGCACCCGCAATTCCAAACTGGCACTAGTAC
AAGCGGAGCATGTTTCCAAGGAGCTGACCAGTGCTCACCCCGGAGTCCAG
TTTCCCTGGCAAACGGTGGTGGTGCGCGGCGATGCCGACAAAAGTAGCCC
TTTCCTGAAATTTGCAGGGCCATCCGACGCAGCAAAGAACATCTGGACCG
AAGAGATGGAAACCAAGCTGTGCGCAGGAGAGCTGGATCTCCTCGTGCAT
TGCCTCAAAGATATGCCGACGCGTCTACCAGAAACCTGCACACTAGGGGC
CATTGTTTATCGGGAAGATCCCACTGATGCGTTGGTGATAAAGGAGGGGC
TGCGGTCGCAGTATACGGATCTGAGTCAACTGCCCCCCGGTTCTGTGGTG
GGCACTAGTTCCACTAGACGGAAAGCCCTACTTCGATACAGATACCCGCA
TTTGAAAGTGGAGGAATGCCGCGGGAACCTCGGAAGTGGGAACGGACGAG
GATGCCGAGGCGTTGGGTGCTACGGTCGCTCAGCAATTGTTGAAGAATGG
CGGACAAGCATTGCTGGAAGAGATTCGTCTGTTACAAGAGACCATTGCGA
CAGATGCAAAATAGCGGAACACGGCTGAAAAAGCTAGATGACCCAGAAGG
TCCATTTTCGGCAATCATCCTGGCCACGGCCGGTATGGTCCGCATCAATC
TGGAAGATCGCATTACGAAACGCTTGCCTCCCTCGGAGTTCCCGTACGCT
GTCGGTCAGGGCGCCCTGGGCATTGAAATCCGCAAGGAGGACGCCCAGAC
AAAGACCATGGTTCGAAAAATCGAAGACCTGGTTACCCGTCGGATCTGTC
TGGCAGAGCGGTCACTGCTACGCACTCTTCAGGGCGGCTGCTCGTCTCCA
GTCGCAGTACATTGCACTGTTGAGCAGGCACCAACAGCTTCCTCGCCAGC
TCAATTGCGACTAGATGATGTCACAAAACACTACGACCACAGTACAGGAG
CTACGCCTGGGCACCCGCAATTCCAAACTGGCACTAGTACAAGCGGAGCA
TGTTTCCAAGGAGCTGACCAGTGCTCACCCCGGAGTCCAGTTTCCCTGGC
AAACGGTGGTGGTGCGCGGCGATGCCGACAAAAGTAGCCCTTTCCTGAAA
TTTGCAGGGCCATCCGACGCAGCAAAGAACATCTGGACCGAAGAGATGGA
AACCAAGCTGTGCGCAGGAGAGCTGGATCTCCTCGTGCATTGCCTCAAAG
ATATGCCGACGCGTCTACCAGAAACCTGCACACTAGGGGCCATTGTTTAT
CGGGAAGATCCCACTGATGCGTTGGTGATAAAGGAGGGGCTGCGGTCGCA
GTATACGGATCTGAGTCAACTGCCCCCCGGTTCTGTGGTGGGCACTAGTT
CCACTAGACGGAAAGCCCTACTTCGATACAGATACCCGCATTTGAAAGTG
GAGGAATGCCGCGGGAACCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0018160 | peptidyl-pyrromethane cofactor linkage |
| GO:0033014 | tetrapyrrole biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004418 | hydroxymethylbilane synthase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022419 |
| DBxref | InterPro:IPR022418 |
| DBxref | InterPro:IPR022417 |
| DBxref | InterPro:IPR036803 |
| DBxref | InterPro:IPR000860 |
| DBxref | PFAM:PF03900 |
| DBxref | PFAM:PF01379 |
| Product | hydroxymethylbilane synthase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:1589384..1590484 - |
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