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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:1595941..1597090+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_38670-T1 ID=CAN33_38670-T1|Name=CAN33_38670-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1150bp|location=Sequence derived from alignment at NKJJ01000017.1:1595941..1597090+ (Aspergillus niger FDAARGOS_311)
ATGGCCGCCAGAAACACACTCCGTCGCGCCCTTCTCTACAGTACGTCACT
GCCCCCTTCTCTTCCCAACCCATAGCTCTCCCCGCATTTCCGCACTCATC
CCACACCCCAACATGCTATCCGACTATACCAATTACCCCCTAACTAACCC
CCAATCCCAGTCCCGGGCTCCTCCCAACGCTTCATCGATAAATCCCGCAC
ACTAACCGCCGACTGCGTGGCCTACGATCTCGAAGACAGCGTAACTCCGC
ACAAGAAAGCGGAAGCTCGGTCCCTGGTGCGGAGAGCACTCGACGAGCCC
GCACCGCAGGGAATCCGCGAACGAGCCGTACGAATCAACTCCGTGGACAG
CGGCCTCGCCCTAGGCGATCTCACCGAAGTGGTGAGTACCATTATCATCC
CTCACTTTTCTCCTCCATTCAACTCACTAAATCCGGTAATAGCTCAAATC
CCCCAATCTCACAACAATCGTGATCCCCAAAGTCAACACCCCCTCGGACC
TCACTTTCGTGAACGATGTCATCACGCACACTCTCTCCCAACAACAACAG
GATCCTTCCACCCCGAGACCTCCAATCTCCCTCCTCGCTCTAGTCGAATC
CGCCAAATCCCTCACAAACCTCACTCAAATCTGCGCCTCCACGCCCCTCC
TGCAGGGCCTCATTTTCGCGGCCGAAGACTTCGCACTCGACCTCAGCATC
ACCCGTACCCCGTCATTAACTGAGTTCCTCTTCGCAAGATCTATGATTGC
TACGGCTGCTCGCGCTGCGAACCTCCCCTCTACTATTGATTTGGTCTGTA
CAGCGTACAAATCTACCAAGGGGGACGGGTCCCCGCCTGCGGTGCTGGAG
GAGGAATGTCGCGATGGGAGACGGCTAGGGTTCAATGGGAAGCAGTGTAT
TCATCCGTCGCAGGTGGAGACGGCGCAGGCGATCTTTGGACCGGATCCGG
AAGAAGTTAAGTGGGCTGTGAGGGTGTGTGTGGCGGATGAGAAGGCTGCG
AGAGCGGGACGGGGTGCGTGGACGCTTGATGGGAAAATGATTGATGTGCC
GGTGGCGGAGAAGGCCAGGGCGGTGGTTAGGAAGGCGGAGGCGTGTGGAT
TTGATGTTGGGAAGTTGAGGGAGGAGTGGGGGCATCAGGAACCGGAGTGA
back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:1595941..1597090+ >CAN33_38670-T1 ID=CAN33_38670-T1|Name=CAN33_38670-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2907bp|location=Sequence derived from alignment at NKJJ01000017.1:1595941..1597090+ (Aspergillus niger FDAARGOS_311)
ATGGCCGCCAGAAACACACTCCGTCGCGCCCTTCTCTACATCCCGGGCTC
CTCCCAACGCTTCATCGATAAATCCCGCACACTAACCGCCGACTGCGTGG
CCTACGATCTCGAAGACAGCGTAACTCCGCACAAGAAAGCGGAAGCTCGG
TCCCTGGTGCGGAGAGCACTCGACGAGCCCGCACCGCAGGGAATCCGCGA
ACGAGCCGTACGAATCAACTCCGTGGACAGCGGCCTCGCCCTAGGCGATC
TCACCGAAGTGCTCAAATCCCCCAATCTCACAACAATCGTGATCCCCAAA
GTCAACACCCCCTCGGACCTCACTTTCGTGAACGATGTCATCACGCACAC
TCTCTCCCAACAACAACAGGATCCTTCCACCCCGAGACCTCCAATCTCCC
TCCTCGCTCTAGTCGAATCCGCCAAATCCCTCACAAACCTCACTCAAATC
TGCGCCTCCACGCCCCTCCTGCAGGGCCTCATTTTCGCGGCCGAAGACTT
CGCACTCGACCTCAGCATCACCCGTACCCCGTCATTAACTGAGTTCCTCT
TCGCAAGATCTATGATTGCTACGGCTGCTCGCGCTGCGAACCTCCCCTCT
ACTATTGATTTGGTCTGTACAGCGTACAAATCTACCAAGGGGGACGGGTC
CCCGCCTGCGGTGCTGGAGGAGGAATGTCGCGATGGGAGACGGCTAGGGT
TCAATGGGAAGCAGTGTATTCATCCGTCGCAGGTGGAGACGGCGCAGGCG
ATCTTTGGACCGGATCCGGAAGAAGTTAAGTGGGCTGTGAGGGTGTGTGT
GGCGGATGAGAAGGCTGCGAGAGCGGGACGGGGTGCGTGGACGCTTGATG
GGAAAATGATTGATGTGCCGGTGGCGGAGAAGGCCAGGGCGGTGGTTAGG
AAGGCGGAGGCGTGTGGATTTGATGTTGGGAAGTTGAGGGAGGAGTGGGG
GCATCAGGAACCGGAGTGAATGGCCGCCAGAAACACACTCCGTCGCGCCC
TTCTCTACATCCCGGGCTCCTCCCAACGCTTCATCGATAAATCCCGCACA
CTAACCGCCGACTGCGTGGCCTACGATCTCGAAGACAGCGTAACTCCGCA
CAAGAAAGCGGAAGCTCGGTCCCTGGTGCGGAGAGCACTCGACGAGCCCG
CACCGCAGGGAATCCGCGAACGAGCCGTACGAATCAACTCCGTGGACAGC
GGCCTCGCCCTAGGCGATCTCACCGAAGTGCTCAAATCCCCCAATCTCAC
AACAATCGTGATCCCCAAAGTCAACACCCCCTCGGACCTCACTTTCGTGA
ACGATGTCATCACGCACACTCTCTCCCAACAACAACAGGATCCTTCCACC
CCGAGACCTCCAATCTCCCTCCTCGCTCTAGTCGAATCCGCCAAATCCCT
CACAAACCTCACTCAAATCTGCGCCTCCACGCCCCTCCTGCAGGGCCTCA
TTTTCGCGGCCGAAGACTTCGCACTCGACCTCAGCATCACCCGTACCCCG
TCATTAACTGAGTTCCTCTTCGCAAGATCTATGATTGCTACGGCTGCTCG
CGCTGCGAACCTCCCCTCTACTATTGATTTGGTCTGTACAGCGTACAAAT
CTACCAAGGGGGACGGGTCCCCGCCTGCGGTGCTGGAGGAGGAATGTCGC
GATGGGAGACGGCTAGGGTTCAATGGGAAGCAGTGTATTCATCCGTCGCA
GGTGGAGACGGCGCAGGCGATCTTTGGACCGGATCCGGAAGAAGTTAAGT
GGGCTGTGAGGGTGTGTGTGGCGGATGAGAAGGCTGCGAGAGCGGGACGG
GGTGCGTGGACGCTTGATGGGAAAATGATTGATGTGCCGGTGGCGGAGAA
GGCCAGGGCGGTGGTTAGGAAGGCGGAGGCGTGTGGATTTGATGTTGGGA
AGTTGAGGGAGGAGTGGGGGCATCAGGAACCGGAGTGAATGGCCGCCAGA
AACACACTCCGTCGCGCCCTTCTCTACATCCCGGGCTCCTCCCAACGCTT
CATCGATAAATCCCGCACACTAACCGCCGACTGCGTGGCCTACGATCTCG
AAGACAGCGTAACTCCGCACAAGAAAGCGGAAGCTCGGTCCCTGGTGCGG
AGAGCACTCGACGAGCCCGCACCGCAGGGAATCCGCGAACGAGCCGTACG
AATCAACTCCGTGGACAGCGGCCTCGCCCTAGGCGATCTCACCGAAGTGC
TCAAATCCCCCAATCTCACAACAATCGTGATCCCCAAAGTCAACACCCCC
TCGGACCTCACTTTCGTGAACGATGTCATCACGCACACTCTCTCCCAACA
ACAACAGGATCCTTCCACCCCGAGACCTCCAATCTCCCTCCTCGCTCTAG
TCGAATCCGCCAAATCCCTCACAAACCTCACTCAAATCTGCGCCTCCACG
CCCCTCCTGCAGGGCCTCATTTTCGCGGCCGAAGACTTCGCACTCGACCT
CAGCATCACCCGTACCCCGTCATTAACTGAGTTCCTCTTCGCAAGATCTA
TGATTGCTACGGCTGCTCGCGCTGCGAACCTCCCCTCTACTATTGATTTG
GTCTGTACAGCGTACAAATCTACCAAGGGGGACGGGTCCCCGCCTGCGGT
GCTGGAGGAGGAATGTCGCGATGGGAGACGGCTAGGGTTCAATGGGAAGC
AGTGTATTCATCCGTCGCAGGTGGAGACGGCGCAGGCGATCTTTGGACCG
GATCCGGAAGAAGTTAAGTGGGCTGTGAGGGTGTGTGTGGCGGATGAGAA
GGCTGCGAGAGCGGGACGGGGTGCGTGGACGCTTGATGGGAAAATGATTG
ATGTGCCGGTGGCGGAGAAGGCCAGGGCGGTGGTTAGGAAGGCGGAGGCG
TGTGGATTTGATGTTGGGAAGTTGAGGGAGGAGTGGGGGCATCAGGAACC
GGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015813 |
| DBxref | InterPro:IPR011206 |
| DBxref | InterPro:IPR005000 |
| DBxref | InterPro:IPR040442 |
| DBxref | PFAM:PF03328 |
| Product | HpcH/HpaI aldolase/citrate lyase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:1595941..1597090 + |
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