You are here

Home

CAN33_38690-T1, CAN33_38690-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_38690-T1
Unique NameCAN33_38690-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1608287..1609529-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_38690-T1 ID=CAN33_38690-T1|Name=CAN33_38690-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1243bp|location=Sequence derived from alignment at NKJJ01000017.1:1608287..1609529- (Aspergillus niger FDAARGOS_311)
ATGGTGCACACCAACGTCGTTAGTAAGTGGATCTTTTTCTCCCTTTGGGA
TATATATGGCAAGCAGAGGAGCATGAAGGAAGAATCTAACCGGGATACAT
AGTCATCGGCTCCGGCCCCGCCGCCCACACCGCGGCCATCTACCTTTCCC
GCGCTGAACTCAAGCCCGTCCTCTATGAGGGTATGCTGGCTAACGGCACC
GCCGCTGGCGGTCAGCTCACCACCACCACCGACATCGAGAACTTCCCCGG
TTTCCCGGACGGCATTGGCGGTGGAGAGCTGATGGAGAACATGCGCAAGC
AGTCTGTTCGCTTCGGCACGGAGGTTATCACCGAGACCATCACCAAGGTC
GACTTTTCCCAGAGACCCTTCAAGCTGTGGACGGAATGGAGTGACGGTCC
CACCGACGAGCCCGCTCACACTGCTGACGCCGTCATCATCGCCACCGGCG
CCAACGCTCGTCGCCTCAACCTTCCCGGTGAGGAGAAGTACTGGCAGAAC
GGTATCAGCGCCTGCGCTGTCTGCGACGGTGCCGTGCCCATCTTCCGCAA
CAAGCCCCTCTTCGTCATCGGTGGTGGTGACTCCGCCGCCGAGGAGGCTA
TGTTCCTGGCCAAGTACGGCAGCAGCGTCACTGTCCTTGTCCGTCGCGAC
AAGCTCCGTGCCAGCAAGGCCATGGCCAACCGTCTTCTGTCCCACCCTAA
GGTCACCGTCCGCTTCAACTCCGTCGCTACTGAGGTGCTCGGTGAGGAGA
AGCCCAACGGCCTGATGACCCACCTCAAGGTCAAGAACGTCGTTTCCGGC
GAGGAGGAGGTTGTTGACGCCAACGGTCTCTTCTACGCTGTTGGCCACGA
CCCCGCCACCACCCTGGTCAAGGGTCAGATCAAGCTCGATGAGGACGGAT
ACATCGTTACCCAGCCCGGTACCAGCTACACCAGTGTCGAGGGTGTTTTC
GCTTGCGGTGATGTCCAGGACAAGCGCTACCGCCAGGCCATCACCAGTGC
CGGTAAGCTTTACTCAGTTCCGAATGTATGTCAATTGCAATCAACTAACT
TTGACTCTCAGGATCCGGCTGCATTGCCGCTCTCGAGGCCGAGAAGTACA
TCGCCGAGCGCGAGTCCGGCGAGGAGCCCGCCACCTCCACCGAGAAGGCC
GCTATCAAGCCTGCCACCCAGGAAGTCAACGGTGAAGTCAAGCAGGACGC
CCAGGGTGCCGCCGCCGAGTACAAGTCCAACCCTCTGCTTTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:1608287..1609529-

>CAN33_38690-T1 ID=CAN33_38690-T1|Name=CAN33_38690-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3312bp|location=Sequence derived from alignment at NKJJ01000017.1:1608287..1609529- (Aspergillus niger FDAARGOS_311)
GATCCGGCTGCATTGCCGCTCTCGAGGCCGAGAAGTACATCGCCGAGCGC
GAGTCCGGCGAGGAGCCCGCCACCTCCACCGAGAAGGCCGCTATCAAGCC
TGCCACCCAGGAAGTCAACGGTGAAGTCAAGCAGGACGCCCAGGGTGCCG
CCGCCGAGTACAAGTCCAACCCTCTGCTTTAATCATCGGCTCCGGCCCCG
CCGCCCACACCGCGGCCATCTACCTTTCCCGCGCTGAACTCAAGCCCGTC
CTCTATGAGGGTATGCTGGCTAACGGCACCGCCGCTGGCGGTCAGCTCAC
CACCACCACCGACATCGAGAACTTCCCCGGTTTCCCGGACGGCATTGGCG
GTGGAGAGCTGATGGAGAACATGCGCAAGCAGTCTGTTCGCTTCGGCACG
GAGGTTATCACCGAGACCATCACCAAGGTCGACTTTTCCCAGAGACCCTT
CAAGCTGTGGACGGAATGGAGTGACGGTCCCACCGACGAGCCCGCTCACA
CTGCTGACGCCGTCATCATCGCCACCGGCGCCAACGCTCGTCGCCTCAAC
CTTCCCGGTGAGGAGAAGTACTGGCAGAACGGTATCAGCGCCTGCGCTGT
CTGCGACGGTGCCGTGCCCATCTTCCGCAACAAGCCCCTCTTCGTCATCG
GTGGTGGTGACTCCGCCGCCGAGGAGGCTATGTTCCTGGCCAAGTACGGC
AGCAGCGTCACTGTCCTTGTCCGTCGCGACAAGCTCCGTGCCAGCAAGGC
CATGGCCAACCGTCTTCTGTCCCACCCTAAGGTCACCGTCCGCTTCAACT
CCGTCGCTACTGAGGTGCTCGGTGAGGAGAAGCCCAACGGCCTGATGACC
CACCTCAAGGTCAAGAACGTCGTTTCCGGCGAGGAGGAGGTTGTTGACGC
CAACGGTCTCTTCTACGCTGTTGGCCACGACCCCGCCACCACCCTGGTCA
AGGGTCAGATCAAGCTCGATGAGGACGGATACATCGTTACCCAGCCCGGT
ACCAGCTACACCAGTGTCGAGGGTGTTTTCGCTTGCGGTGATGTCCAGGA
CAAGCGCTACCGCCAGGCCATCACCAGTGCCGATGGTGCACACCAACGTC
GTTAGATCCGGCTGCATTGCCGCTCTCGAGGCCGAGAAGTACATCGCCGA
GCGCGAGTCCGGCGAGGAGCCCGCCACCTCCACCGAGAAGGCCGCTATCA
AGCCTGCCACCCAGGAAGTCAACGGTGAAGTCAAGCAGGACGCCCAGGGT
GCCGCCGCCGAGTACAAGTCCAACCCTCTGCTTTAATCATCGGCTCCGGC
CCCGCCGCCCACACCGCGGCCATCTACCTTTCCCGCGCTGAACTCAAGCC
CGTCCTCTATGAGGGTATGCTGGCTAACGGCACCGCCGCTGGCGGTCAGC
TCACCACCACCACCGACATCGAGAACTTCCCCGGTTTCCCGGACGGCATT
GGCGGTGGAGAGCTGATGGAGAACATGCGCAAGCAGTCTGTTCGCTTCGG
CACGGAGGTTATCACCGAGACCATCACCAAGGTCGACTTTTCCCAGAGAC
CCTTCAAGCTGTGGACGGAATGGAGTGACGGTCCCACCGACGAGCCCGCT
CACACTGCTGACGCCGTCATCATCGCCACCGGCGCCAACGCTCGTCGCCT
CAACCTTCCCGGTGAGGAGAAGTACTGGCAGAACGGTATCAGCGCCTGCG
CTGTCTGCGACGGTGCCGTGCCCATCTTCCGCAACAAGCCCCTCTTCGTC
ATCGGTGGTGGTGACTCCGCCGCCGAGGAGGCTATGTTCCTGGCCAAGTA
CGGCAGCAGCGTCACTGTCCTTGTCCGTCGCGACAAGCTCCGTGCCAGCA
AGGCCATGGCCAACCGTCTTCTGTCCCACCCTAAGGTCACCGTCCGCTTC
AACTCCGTCGCTACTGAGGTGCTCGGTGAGGAGAAGCCCAACGGCCTGAT
GACCCACCTCAAGGTCAAGAACGTCGTTTCCGGCGAGGAGGAGGTTGTTG
ACGCCAACGGTCTCTTCTACGCTGTTGGCCACGACCCCGCCACCACCCTG
GTCAAGGGTCAGATCAAGCTCGATGAGGACGGATACATCGTTACCCAGCC
CGGTACCAGCTACACCAGTGTCGAGGGTGTTTTCGCTTGCGGTGATGTCC
AGGACAAGCGCTACCGCCAGGCCATCACCAGTGCCGATGGTGCACACCAA
CGTCGTTAGATCCGGCTGCATTGCCGCTCTCGAGGCCGAGAAGTACATCG
CCGAGCGCGAGTCCGGCGAGGAGCCCGCCACCTCCACCGAGAAGGCCGCT
ATCAAGCCTGCCACCCAGGAAGTCAACGGTGAAGTCAAGCAGGACGCCCA
GGGTGCCGCCGCCGAGTACAAGTCCAACCCTCTGCTTTAATCATCGGCTC
CGGCCCCGCCGCCCACACCGCGGCCATCTACCTTTCCCGCGCTGAACTCA
AGCCCGTCCTCTATGAGGGTATGCTGGCTAACGGCACCGCCGCTGGCGGT
CAGCTCACCACCACCACCGACATCGAGAACTTCCCCGGTTTCCCGGACGG
CATTGGCGGTGGAGAGCTGATGGAGAACATGCGCAAGCAGTCTGTTCGCT
TCGGCACGGAGGTTATCACCGAGACCATCACCAAGGTCGACTTTTCCCAG
AGACCCTTCAAGCTGTGGACGGAATGGAGTGACGGTCCCACCGACGAGCC
CGCTCACACTGCTGACGCCGTCATCATCGCCACCGGCGCCAACGCTCGTC
GCCTCAACCTTCCCGGTGAGGAGAAGTACTGGCAGAACGGTATCAGCGCC
TGCGCTGTCTGCGACGGTGCCGTGCCCATCTTCCGCAACAAGCCCCTCTT
CGTCATCGGTGGTGGTGACTCCGCCGCCGAGGAGGCTATGTTCCTGGCCA
AGTACGGCAGCAGCGTCACTGTCCTTGTCCGTCGCGACAAGCTCCGTGCC
AGCAAGGCCATGGCCAACCGTCTTCTGTCCCACCCTAAGGTCACCGTCCG
CTTCAACTCCGTCGCTACTGAGGTGCTCGGTGAGGAGAAGCCCAACGGCC
TGATGACCCACCTCAAGGTCAAGAACGTCGTTTCCGGCGAGGAGGAGGTT
GTTGACGCCAACGGTCTCTTCTACGCTGTTGGCCACGACCCCGCCACCAC
CCTGGTCAAGGGTCAGATCAAGCTCGATGAGGACGGATACATCGTTACCC
AGCCCGGTACCAGCTACACCAGTGTCGAGGGTGTTTTCGCTTGCGGTGAT
GTCCAGGACAAGCGCTACCGCCAGGCCATCACCAGTGCCGATGGTGCACA
CCAACGTCGTTA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0004791thioredoxin-disulfide reductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0019430removal of superoxide radicals
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TRR1CAN33_38690Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38690-T1CAN33_38690-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38690-T1.cdsCAN33_38690-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38690-T1.exon3CAN33_38690-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_38690-T1.exon2CAN33_38690-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_38690-T1.exon1CAN33_38690-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG0926386D
DBxrefInterPro:IPR008255
DBxrefInterPro:IPR023753
DBxrefInterPro:IPR036188
DBxrefInterPro:IPR005982
DBxrefPFAM:PF13738
DBxrefPFAM:PF07992
DBxrefPFAM:PF00070
Productthioredoxin-disulfide reductase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1608287..1609529 -
Powered by Drupal