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CAN33_38765-T1, CAN33_38765-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_38765-T1
Unique NameCAN33_38765-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1654581..1655440+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_38765-T1 ID=CAN33_38765-T1|Name=CAN33_38765-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=860bp|location=Sequence derived from alignment at NKJJ01000017.1:1654581..1655440+ (Aspergillus niger FDAARGOS_311)
ATGGCCCAGGAAATCCAAAAAGAGAACAATGACCATTTGGTCCAGTCGTC
TGACCCCGAGCATCCCGCCAACTTGATCCCTGATCTCTGTCGCCGGTTCT
ACAATTGGGGCTGGGTCACCGGTACTGGTGGCGGGGTAAGCACTGTTGCA
CCTCCAGGACGATCATGAGTAATCGCTAATCGATTCCTATTTATTTCTGC
ATTAGACTTCCATTCGTCGCGATAATCATATATTCATTGCTCCTTCTGGC
GTGCAGAAGGAGATGATGAAATCCGACAACATCTTTGTCTTGGAATTCCC
TACGCCCAAGTATCCTCCGTCCGATCGCAAATATATTCGCAAGCCGCTCG
ACCTGAAGCCCTCGGCATGCACGCCACTGTTCCTTGCCGCTTTTGAGCGC
GGGGCTGGCTGCTGCATCCACACTCATTCTCAGTGGGCGGTCCTGGTGAC
CCTCCTGGTTGAGCGCGAGAAGGGCCCGAACGCCTGCTTCGAAATTAGCA
ACATTGAACAGATTAAGGGTATTCCCCGTGGAAAGGGCAAGGGCATGATG
GGTTTCTACGATACTCTTCGTATCCCGATTATTGATAACACCGCGTTTGA
GGAAGATCTCACGGGAAGCTTGGAGAAGGCGATGGAGGAGTACCCTGACA
CCTATGCTGTCCTTGTGCGGAGACACGGAATGTAAGTTTCATTTTTTTAA
CCCTTAACTTTCGAGTGACGGCGGGCTTATGTGTGTGTATAGTTATGTGT
GGGGAGACGACGTCGTCAAAGCCAAGACTCAGTGCGAGAGTCTAGACTAC
CTGTTCCAGCTTGCTGTTGAGATGCACAAGCTTGGCCTTCCGTGGGTGAA
AGAAACGTAG
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1654581..1655440+

>CAN33_38765-T1 ID=CAN33_38765-T1|Name=CAN33_38765-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2187bp|location=Sequence derived from alignment at NKJJ01000017.1:1654581..1655440+ (Aspergillus niger FDAARGOS_311)
ATGGCCCAGGAAATCCAAAAAGAGAACAATGACCATTTGGTCCAGTCGTC
TGACCCCGAGCATCCCGCCAACTTGATCCCTGATCTCTGTCGCCGGTTCT
ACAATTGGGGCTGGGTCACCGGTACTGGTGGCGGGACTTCCATTCGTCGC
GATAATCATATATTCATTGCTCCTTCTGGCGTGCAGAAGGAGATGATGAA
ATCCGACAACATCTTTGTCTTGGAATTCCCTACGCCCAAGTATCCTCCGT
CCGATCGCAAATATATTCGCAAGCCGCTCGACCTGAAGCCCTCGGCATGC
ACGCCACTGTTCCTTGCCGCTTTTGAGCGCGGGGCTGGCTGCTGCATCCA
CACTCATTCTCAGTGGGCGGTCCTGGTGACCCTCCTGGTTGAGCGCGAGA
AGGGCCCGAACGCCTGCTTCGAAATTAGCAACATTGAACAGATTAAGGGT
ATTCCCCGTGGAAAGGGCAAGGGCATGATGGGTTTCTACGATACTCTTCG
TATCCCGATTATTGATAACACCGCGTTTGAGGAAGATCTCACGGGAAGCT
TGGAGAAGGCGATGGAGGAGTACCCTGACACCTATGCTGTCCTTGTGCGG
AGACACGGAATTTATGTGTGGGGAGACGACGTCGTCAAAGCCAAGACTCA
GTGCGAGAGTCTAGACTACCTGTTCCAGCTTGCTGTTGAGATGCACAAGC
TTGGCCTTCCGTGGGTGAAAGAAACGTAGATGGCCCAGGAAATCCAAAAA
GAGAACAATGACCATTTGGTCCAGTCGTCTGACCCCGAGCATCCCGCCAA
CTTGATCCCTGATCTCTGTCGCCGGTTCTACAATTGGGGCTGGGTCACCG
GTACTGGTGGCGGGACTTCCATTCGTCGCGATAATCATATATTCATTGCT
CCTTCTGGCGTGCAGAAGGAGATGATGAAATCCGACAACATCTTTGTCTT
GGAATTCCCTACGCCCAAGTATCCTCCGTCCGATCGCAAATATATTCGCA
AGCCGCTCGACCTGAAGCCCTCGGCATGCACGCCACTGTTCCTTGCCGCT
TTTGAGCGCGGGGCTGGCTGCTGCATCCACACTCATTCTCAGTGGGCGGT
CCTGGTGACCCTCCTGGTTGAGCGCGAGAAGGGCCCGAACGCCTGCTTCG
AAATTAGCAACATTGAACAGATTAAGGGTATTCCCCGTGGAAAGGGCAAG
GGCATGATGGGTTTCTACGATACTCTTCGTATCCCGATTATTGATAACAC
CGCGTTTGAGGAAGATCTCACGGGAAGCTTGGAGAAGGCGATGGAGGAGT
ACCCTGACACCTATGCTGTCCTTGTGCGGAGACACGGAATTTATGTGTGG
GGAGACGACGTCGTCAAAGCCAAGACTCAGTGCGAGAGTCTAGACTACCT
GTTCCAGCTTGCTGTTGAGATGCACAAGCTTGGCCTTCCGTGGGTGAAAG
AAACGTAGATGGCCCAGGAAATCCAAAAAGAGAACAATGACCATTTGGTC
CAGTCGTCTGACCCCGAGCATCCCGCCAACTTGATCCCTGATCTCTGTCG
CCGGTTCTACAATTGGGGCTGGGTCACCGGTACTGGTGGCGGGACTTCCA
TTCGTCGCGATAATCATATATTCATTGCTCCTTCTGGCGTGCAGAAGGAG
ATGATGAAATCCGACAACATCTTTGTCTTGGAATTCCCTACGCCCAAGTA
TCCTCCGTCCGATCGCAAATATATTCGCAAGCCGCTCGACCTGAAGCCCT
CGGCATGCACGCCACTGTTCCTTGCCGCTTTTGAGCGCGGGGCTGGCTGC
TGCATCCACACTCATTCTCAGTGGGCGGTCCTGGTGACCCTCCTGGTTGA
GCGCGAGAAGGGCCCGAACGCCTGCTTCGAAATTAGCAACATTGAACAGA
TTAAGGGTATTCCCCGTGGAAAGGGCAAGGGCATGATGGGTTTCTACGAT
ACTCTTCGTATCCCGATTATTGATAACACCGCGTTTGAGGAAGATCTCAC
GGGAAGCTTGGAGAAGGCGATGGAGGAGTACCCTGACACCTATGCTGTCC
TTGTGCGGAGACACGGAATTTATGTGTGGGGAGACGACGTCGTCAAAGCC
AAGACTCAGTGCGAGAGTCTAGACTACCTGTTCCAGCTTGCTGTTGAGAT
GCACAAGCTTGGCCTTCCGTGGGTGAAAGAAACGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0019509L-methionine salvage from methylthioadenosine
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MDE1CAN33_38765Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38765-T1.exon1CAN33_38765-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_38765-T1.exon2CAN33_38765-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_38765-T1.exon3CAN33_38765-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38765-T1.cdsCAN33_38765-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38765-T1CAN33_38765-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027514
DBxrefInterPro:IPR036409
DBxrefInterPro:IPR017714
DBxrefInterPro:IPR001303
DBxrefPFAM:PF00596
ProductMethylthioribulose-1-phosphate dehydratase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1654581..1655440 +
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