|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:1679685..1681791+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_38795-T1 ID=CAN33_38795-T1|Name=CAN33_38795-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2107bp|location=Sequence derived from alignment at NKJJ01000017.1:1679685..1681791+ (Aspergillus niger FDAARGOS_311)
ATGTACACACAAACCCACCAAGGGCAGCATGTCATGATGAATGGCGGCCA
GGCCCACCAGCGATTTGGCATGCAGATCCCCAAGTTCCAATCGCAGAGCC
ATCACCCCCACCCCGCACAGCAGGCCCATCACCATGCCCATCACAACCAA
GCCTCTCATAGCATCAATCACCAGCACAACTTCTCCAGTGGGGCATTGGC
TGCCGCCACTCCGCACTTCACTCCCGGCCCCCTCCAAAATGGCGCTCATG
TTAATGTGGACGAAGATATTGACGAGACCATGAACGAACATTGGCAGCAG
CAACTCCAGTTGGCTGCAGAGTCACGGCAGGCGAGCTCCCCGCATTATTA
CGCCCGTACCGTCGCACAGCAAACCAAGGGCATCCAGATTGCGCCCAGCC
AGCCTGAGTCACAAGAGAACGGGAGCGGCGATCGCAATGGCCTGGTGAAG
TCCAAGCCTGCTCCTCGGCAAGGTTGGCATGCTCTTGATTTCGGCGGACA
GGGTCTCCGCGCGCTTGCGACATCTTTGTTCCACTATACCTTCCTAGAGA
AATTGTACCTCAACCACAACAAGTTGAAGACGCTTCCTCCGGCAATTGGT
CAACTGCGGAAGCTCACCCACTTGGATTTGTCGAGCAATGATATTTCGGA
GCTCCCTGAAGAGATCGGTATGCTCACAAGCTTGAAGCAGCTGCTTCTCT
TCGATAACAACATTCGCACGCTTCCGTTCGAAATGGGTTATCTGTATAGA
TTAGAGATGCTGGGAATCGAAGGGAATCCTTTGAACGATGTTCTGAAGTC
TCAGATCATTAAGGAAGGAACCAAGGCCCTAGTCCGGTATTTGAGGGAAG
AAATGCCAGGTTTGTGCTCACGACTTAAAGCTCTCACCATGCACTTCAGA
CTAACTTTGTCTCCAAAAAGTTCATCTTCCTCCCCCGGATAGAGATTGGA
TCATCCTGGACGAGACCGCTAGCTCCTCCAACAGTCCCACCGAGAAGATT
ACCGTCCTTTCCCACAATGCCCTCTGCGACTCTTCCGCAACCCCGAGTCA
CTTCGGTTATACCCCGTCCCGTGTTCTTTCTTGGGAGTTCAGACGCGAGC
TTATCCTGAGCGAGCTGAGGTCGCACGACTCGGACATTATATGTCTCCAG
GAGATCGACCAAGGCAGTTACAATGGATTCTTCCGGGAGCAGCTGGCTTA
TAACGATTACAAGGGTGTATACTGGCCCAGAGGCAGAGCCATGGGTATGC
AGGAGGAGGAAGCGAAGTCGGTCGATGGCTGTGCCACCTTCTTCAAGGGA
AGCAAGTTCATCCTCCTCGATAAGCAGATGATCAACTTCGGTCAAACAGC
AGTGCGGCGACCGGATGCCAAGGGTCAAGATGACATCTACAACAGACTCT
GGCAGAAGGATCATATTGCGGTGGTTATCTTCCTGGAGAACAGGCTGACA
GGCTCCCGCTTTATCGTCGTGAACGCGCATCTCTACTGGGATCCCGCTTT
CAAGGACGTGAAGTTGATTCAGACCGCCATTTTGATGGAGGAAATCACCA
AACTCTCCGAGAAGTACGCGAAATTCCCGCCATGTACCGACAAGACTGCC
TTCCGCTTCTCGGAAGCAGAAGGTGAGTCGGACACTCCTCCACCTGAACC
TGCGCCATCTGTGGAGTATGCCAGTGGTGATCAGATCCCGCTTTTCATGT
GCGGAGACTTCAACTCGGCGCCTGGGTCGGCAGCGTACAACCTGGTCGCA
CACGGCCGGCTCACGGAGTCCCATCCGGACTTGGAGAAGAGGCTCTACGG
CAACCTTAGTCGGGTCGGTATGACGCACCCGTTCAAGCTGAAGTCGGCAT
ACAACTCGATTGGCGAGCTGAGCTTCACGAACTACACTCCGGACTTCAAA
GATATTCTTGACTATATTTGGTATACTTCCAACACACTTCATGTCTCGGC
GTTACTTGGGGAGGTGGACAAGGAGTATCTGCAGAAGGTGCCCGGGTTCC
CCAATTTTCATTTTCCAAGTGATCATGTCGCATTATTTGCGGAGTTTACA
GTTAAAGGGAAAAAGGGAAAGGTTGTGGAAGCGGATTTTGGGCCGCAACG
GAATTGA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:1679685..1681791+ >CAN33_38795-T1 ID=CAN33_38795-T1|Name=CAN33_38795-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4092bp|location=Sequence derived from alignment at NKJJ01000017.1:1679685..1681791+ (Aspergillus niger FDAARGOS_311)
ATGTACACACAAACCCACCAAGGGCAGCATGTCATGATGAATGGCGGCCA
GGCCCACCAGCGATTTGGCATGCAGATCCCCAAGTTCCAATCGCAGAGCC
ATCACCCCCACCCCGCACAGCAGGCCCATCACCATGCCCATCACAACCAA
GCCTCTCATAGCATCAATCACCAGCACAACTTCTCCAGTGGGGCATTGGC
TGCCGCCACTCCGCACTTCACTCCCGGCCCCCTCCAAAATGGCGCTCATG
TTAATGTGGACGAAGATATTGACGAGACCATGAACGAACATTGGCAGCAG
CAACTCCAGTTGGCTGCAGAGTCACGGCAGGCGAGCTCCCCGCATTATTA
CGCCCGTACCGTCGCACAGCAAACCAAGGGCATCCAGATTGCGCCCAGCC
AGCCTGAGTCACAAGAGAACGGGAGCGGCGATCGCAATGGCCTGGTGAAG
TCCAAGCCTGCTCCTCGGCAAGGTTGGCATGCTCTTGATTTCGGCGGACA
GGGTCTCCGCGCGCTTGCGACATCTTTGTTCCACTATACCTTCCTAGAGA
AATTGTACCTCAACCACAACAAGTTGAAGACGCTTCCTCCGGCAATTGGT
CAACTGCGGAAGCTCACCCACTTGGATTTGTCGAGCAATGATATTTCGGA
GCTCCCTGAAGAGATCGGTATGCTCACAAGCTTGAAGCAGCTGCTTCTCT
TCGATAACAACATTCGCACGCTTCCGTTCGAAATGGGTTATCTGTATAGA
TTAGAGATGCTGGGAATCGAAGGGAATCCTTTGAACGATGTTCTGAAGTC
TCAGATCATTAAGGAAGGAACCAAGGCCCTAGTCCGGTATTTGAGGGAAG
AAATGCCAGTTCATCTTCCTCCCCCGGATAGAGATTGGATCATCCTGGAC
GAGACCGCTAGCTCCTCCAACAGTCCCACCGAGAAGATTACCGTCCTTTC
CCACAATGCCCTCTGCGACTCTTCCGCAACCCCGAGTCACTTCGGTTATA
CCCCGTCCCGTGTTCTTTCTTGGGAGTTCAGACGCGAGCTTATCCTGAGC
GAGCTGAGGTCGCACGACTCGGACATTATATGTCTCCAGGAGATCGACCA
AGGCAGTTACAATGGATTCTTCCGGGAGCAGCTGGCTTATAACGATTACA
AGGGTGTATACTGGCCCAGAGGCAGAGCCATGGGTATGCAGGAGGAGGAA
GCGAAGTCGGTCGATGGCTGTGCCACCTTCTTCAAGGGAAGCAAGTTCAT
CCTCCTCGATAAGCAGATGATCAACTTCGGTCAAACAGCAGTGCGGCGAC
CGGATGCCAAGGGTCAAGATGACATCTACAACAGACTCTGGCAGAAGGAT
CATATTGCGGTGGTTATCTTCCTGGAGAACAGGCTGACAGGCTCCCGCTT
TATCGTCGTGAACGCGCATCTCTACTGGGATCCCGCTTTCAAGGACGTGA
AGTTGATTCAGACCGCCATTTTGATGGAGGAAATCACCAAACTCTCCGAG
AAGTACGCGAAATTCCCGCCATGTACCGACAAGACTGCCTTCCGCTTCTC
GGAAGCAGAAGGTGAGTCGGACACTCCTCCACCTGAACCTGCGCCATCTG
TGGAGTATGCCAGTGGTGATCAGATCCCGCTTTTCATGTGCGGAGACTTC
AACTCGGCGCCTGGGTCGGCAGCGTACAACCTGGTCGCACACGGCCGGCT
CACGGAGTCCCATCCGGACTTGGAGAAGAGGCTCTACGGCAACCTTAGTC
GGGTCGGTATGACGCACCCGTTCAAGCTGAAGTCGGCATACAACTCGATT
GGCGAGCTGAGCTTCACGAACTACACTCCGGACTTCAAAGATATTCTTGA
CTATATTTGGTATACTTCCAACACACTTCATGTCTCGGCGTTACTTGGGG
AGGTGGACAAGGAGTATCTGCAGAAGGTGCCCGGGTTCCCCAATTTTCAT
TTTCCAAGTGATCATGTCGCATTATTTGCGGAGTTTACAGTTAAAGGGAA
AAAGGGAAAGGTTGTGGAAGCGGATTTTGGGCCGCAACGGAATTGAATGT
ACACACAAACCCACCAAGGGCAGCATGTCATGATGAATGGCGGCCAGGCC
CACCAGCGATTTGGCATGCAGATCCCCAAGTTCCAATCGCAGAGCCATCA
CCCCCACCCCGCACAGCAGGCCCATCACCATGCCCATCACAACCAAGCCT
CTCATAGCATCAATCACCAGCACAACTTCTCCAGTGGGGCATTGGCTGCC
GCCACTCCGCACTTCACTCCCGGCCCCCTCCAAAATGGCGCTCATGTTAA
TGTGGACGAAGATATTGACGAGACCATGAACGAACATTGGCAGCAGCAAC
TCCAGTTGGCTGCAGAGTCACGGCAGGCGAGCTCCCCGCATTATTACGCC
CGTACCGTCGCACAGCAAACCAAGGGCATCCAGATTGCGCCCAGCCAGCC
TGAGTCACAAGAGAACGGGAGCGGCGATCGCAATGGCCTGGTGAAGTCCA
AGCCTGCTCCTCGGCAAGGTTGGCATGCTCTTGATTTCGGCGGACAGGGT
CTCCGCGCGCTTGCGACATCTTTGTTCCACTATACCTTCCTAGAGAAATT
GTACCTCAACCACAACAAGTTGAAGACGCTTCCTCCGGCAATTGGTCAAC
TGCGGAAGCTCACCCACTTGGATTTGTCGAGCAATGATATTTCGGAGCTC
CCTGAAGAGATCGGTATGCTCACAAGCTTGAAGCAGCTGCTTCTCTTCGA
TAACAACATTCGCACGCTTCCGTTCGAAATGGGTTATCTGTATAGATTAG
AGATGCTGGGAATCGAAGGGAATCCTTTGAACGATGTTCTGAAGTCTCAG
ATCATTAAGGAAGGAACCAAGGCCCTAGTCCGGTATTTGAGGGAAGAAAT
GCCAGTTCATCTTCCTCCCCCGGATAGAGATTGGATCATCCTGGACGAGA
CCGCTAGCTCCTCCAACAGTCCCACCGAGAAGATTACCGTCCTTTCCCAC
AATGCCCTCTGCGACTCTTCCGCAACCCCGAGTCACTTCGGTTATACCCC
GTCCCGTGTTCTTTCTTGGGAGTTCAGACGCGAGCTTATCCTGAGCGAGC
TGAGGTCGCACGACTCGGACATTATATGTCTCCAGGAGATCGACCAAGGC
AGTTACAATGGATTCTTCCGGGAGCAGCTGGCTTATAACGATTACAAGGG
TGTATACTGGCCCAGAGGCAGAGCCATGGGTATGCAGGAGGAGGAAGCGA
AGTCGGTCGATGGCTGTGCCACCTTCTTCAAGGGAAGCAAGTTCATCCTC
CTCGATAAGCAGATGATCAACTTCGGTCAAACAGCAGTGCGGCGACCGGA
TGCCAAGGGTCAAGATGACATCTACAACAGACTCTGGCAGAAGGATCATA
TTGCGGTGGTTATCTTCCTGGAGAACAGGCTGACAGGCTCCCGCTTTATC
GTCGTGAACGCGCATCTCTACTGGGATCCCGCTTTCAAGGACGTGAAGTT
GATTCAGACCGCCATTTTGATGGAGGAAATCACCAAACTCTCCGAGAAGT
ACGCGAAATTCCCGCCATGTACCGACAAGACTGCCTTCCGCTTCTCGGAA
GCAGAAGGTGAGTCGGACACTCCTCCACCTGAACCTGCGCCATCTGTGGA
GTATGCCAGTGGTGATCAGATCCCGCTTTTCATGTGCGGAGACTTCAACT
CGGCGCCTGGGTCGGCAGCGTACAACCTGGTCGCACACGGCCGGCTCACG
GAGTCCCATCCGGACTTGGAGAAGAGGCTCTACGGCAACCTTAGTCGGGT
CGGTATGACGCACCCGTTCAAGCTGAAGTCGGCATACAACTCGATTGGCG
AGCTGAGCTTCACGAACTACACTCCGGACTTCAAAGATATTCTTGACTAT
ATTTGGTATACTTCCAACACACTTCATGTCTCGGCGTTACTTGGGGAGGT
GGACAAGGAGTATCTGCAGAAGGTGCCCGGGTTCCCCAATTTTCATTTTC
CAAGTGATCATGTCGCATTATTTGCGGAGTTTACAGTTAAAGGGAAAAAG
GGAAAGGTTGTGGAAGCGGATTTTGGGCCGCAACGGAATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260WGT |
| DBxref | InterPro:IPR001611 |
| DBxref | InterPro:IPR036691 |
| DBxref | InterPro:IPR005135 |
| DBxref | InterPro:IPR032675 |
| DBxref | InterPro:IPR003591 |
| DBxref | PFAM:PF13855 |
| DBxref | PFAM:PF12799 |
| DBxref | PFAM:PF03372 |
| Product | Glucose-repressible alcohol dehydrogenase transcriptional effector |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:1679685..1681791 + |
|
