You are here

Home

CAN33_38840-T1, CAN33_38840-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_38840-T1
Unique NameCAN33_38840-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1699610..1700359-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_38840-T1 ID=CAN33_38840-T1|Name=CAN33_38840-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=750bp|location=Sequence derived from alignment at NKJJ01000017.1:1699610..1700359- (Aspergillus niger FDAARGOS_311)
ATGACGACCTCCAAAGTCCTCGTTCTCATCACCGGCGCCAACCAAGGCAT
CGGCTTCGCCGCGGCACGGCAACTAGCTAGCTCAAGCAAGTTCCATGTGC
TAGTCGGCGCGCGCACGACACCCAAGGCCGAAGCTGCAATTAAGGAGCTG
TCATCGGATGCAGTGGACAAATCAGCTCTCACACCCATCACCATCGATGT
GACAGATGACGCATCTATCGCTGCAGCTGCCCAGACCGTATCGGAAACAT
TCGGACGTCTGGACATCCTGATCAACAATGCGGGCATTGCGCAGACACCT
GCTACTACCCTGCGCGAGCAATACCGGCAAGTTTTCGATGTCAACGTGTT
TGGCATCGTGGTTGTCATGGATACATTCCTCCCATTGCTGCGTGCGTCGA
CGTTTTCCGATCGCCGCATTGTCAATGTCACATCCGGACAGGGTCTGATC
AGCAGAGCCGGCCACAGGGATCACCCGGCTAACGCAAAGACCTATTTCAT
ACCTGACTACCGCAGTAGCAAAGCAGCGGTCAATATGATCACCGTCGCTC
ATGCGGTAAAGCTGGCTGAGGAGAAAATCACCGTCATTGCGGCTGCTCCG
GGCTATTGCCGCACCAATATCAACGGAGGCCAAGGGGTCAAGGAAGCAAG
CGACGGGGCCAGGGTCATTGTGCGCGCTGCCACCGAAGGAGACCCGGAGA
AACTGAGTGGGACGTTCGTCGCTGACGAACAATGGACCCTTGGTTGGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:1699610..1700359-

>CAN33_38840-T1 ID=CAN33_38840-T1|Name=CAN33_38840-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=750bp|location=Sequence derived from alignment at NKJJ01000017.1:1699610..1700359- (Aspergillus niger FDAARGOS_311)
ATGACGACCTCCAAAGTCCTCGTTCTCATCACCGGCGCCAACCAAGGCAT
CGGCTTCGCCGCGGCACGGCAACTAGCTAGCTCAAGCAAGTTCCATGTGC
TAGTCGGCGCGCGCACGACACCCAAGGCCGAAGCTGCAATTAAGGAGCTG
TCATCGGATGCAGTGGACAAATCAGCTCTCACACCCATCACCATCGATGT
GACAGATGACGCATCTATCGCTGCAGCTGCCCAGACCGTATCGGAAACAT
TCGGACGTCTGGACATCCTGATCAACAATGCGGGCATTGCGCAGACACCT
GCTACTACCCTGCGCGAGCAATACCGGCAAGTTTTCGATGTCAACGTGTT
TGGCATCGTGGTTGTCATGGATACATTCCTCCCATTGCTGCGTGCGTCGA
CGTTTTCCGATCGCCGCATTGTCAATGTCACATCCGGACAGGGTCTGATC
AGCAGAGCCGGCCACAGGGATCACCCGGCTAACGCAAAGACCTATTTCAT
ACCTGACTACCGCAGTAGCAAAGCAGCGGTCAATATGATCACCGTCGCTC
ATGCGGTAAAGCTGGCTGAGGAGAAAATCACCGTCATTGCGGCTGCTCCG
GGCTATTGCCGCACCAATATCAACGGAGGCCAAGGGGTCAAGGAAGCAAG
CGACGGGGCCAGGGTCATTGTGCGCGCTGCCACCGAAGGAGACCCGGAGA
AACTGAGTGGGACGTTCGTCGCTGACGAACAATGGACCCTTGGTTGGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_38840CAN33_38840Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38840-T1.cdsCAN33_38840-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38840-T1.exon1CAN33_38840-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38840-T1CAN33_38840-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1699610..1700359 -
Powered by Drupal