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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:1721097..1723103- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_38875-T1 ID=CAN33_38875-T1|Name=CAN33_38875-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2007bp|location=Sequence derived from alignment at NKJJ01000017.1:1721097..1723103- (Aspergillus niger FDAARGOS_311)
ATGTCGGCTACTTCATTTCTGGACAAACCACTCCTCAAAGTCAGTCGACC
AGTGGCTGCTTGCTCAAGATGCCGAACAGCCAAAATCAAATGTGACGGGA
AGCTTCCGGCCTGCTCCGCGTGCGAAAGGGTCGGGAAAGCGAGCACCTGC
TCCGGCGCAAGTGACGAATTCGCCAGAGGAAAGGAAAGAAGCTATGTCGC
CTCTTTGGAAGGTTACTGCGAACGACTCAAAACGAAGATTGACGATCTTC
GCCGCCTCAAAACATCATTATCAGTGGACGAAAGGGGTGTCGCCCATCAA
AGTTCGATCACCTCCATCTCCTCGGCAGGTACTGTTGCACAGGAAGGTGG
CAAAGAAGTGACTGACATCGATGACCTCGTTGGTGATTTTGGCTTCTTGT
AAGTTCTCGCTGAAATTAGCACGATGTTCCTCGGACTGACACCAATCAGG
TCCGTCAATGCGACTTCGAGAGACTTCCATGGGATTACTTCGAATACGTC
TTTCGCCAATCTTCTTCTGTCCCTGTCTCAAGCTGAGTCGATACCAAGAA
CGACGGCGCAGTCAATACCGCCACGCCATGAGATAATGCCCGTGCTACAA
CACTATTTCGACAACATCTACATACAGCTTCCATTTTTCGCCGAAACGAG
CTTCTGGACATCTGTGGATGCGGTCTACCAAGCTGGGGGCGCTTTGCCAA
GCCCTTTGACAAGTGGATTGTGCATATGGTCTTAGCCACTGCGTCTGCGT
CTATCTCCCTCGAGATCGGTGATAGAAGTCATCACAGAGCGTTGTCTCAT
GTTTCAATGGCAATGAATCAAGCCGAGGACGTCGTCCGTCCCGGTACTAT
AGCCGGTATCCAGTCAATCCTCCTGCTTGCCCAATATTCCTTATTCGACC
CCCAACACTTTCGCAGCTGGTACTTAGTAGGGATGGCTGTCAGGGTAATG
GTCGATCTAGGCCTACACCAGGACCCGCCTTTGGATGTTCAGTCAGCCTC
GGAGCAGTTGGACCTGCGCCGCCGTGTTTTCCATTGTGTCTATTGCTTGG
ATAGGTGTGTTAAACTTCTTTTTGTCCCGGATACATACTTGCTACTTGAT
ACTTGAGCTAACGAAAGAAACTCCATTTCACTTTTAAAGAGGAATAAGCA
CTGCCTTTGAAAGAACCTTCTCGTTCTCGGACGATTCCGTCGATGTTGCT
TTGCCGTCTTCTGCCACGTCCCTAGGGGCTTCACTAACCGAAAAGAGCCA
TATATTTTTACGAAGCTCGGAGCCTGCGTGGCACATCGTCAGAATTCGCC
AAATACTGTCGGAGGGTTACCAGAGAAGATATTTTCATGAACACGAGACT
TCTCTTCAAGCTCCGGCCTCGACGTGGGCTCTCTGCTCAAAAGCATACGA
GTGGTTTGATAAAATCCCGAGTAATATACCAAACCACTTCCCCATCCTGT
ACCGATTGGAGCTATCATACGCGATAGTCGTGATTCTCTCTGCTGGCGAC
GAACAGACCACACTATGTGATTACAGCAAGATTGTTCTGTTCCATTGCTG
CATGCGGTACATCAAAGAACTCTATGAGGTGCTGAAGAACCCTGCCTGGC
TGCCCCTGATGACCTTCCTGGATATTCAGAGGACGTATCAAGTTGGCCGA
CGATTCATACGAGATGTGACAGAAAACCAGGACCTTCTCTTGAACCCGTC
GATACCCGCATTACCCTCAATTCCTCCGGAGACCCCGGAACAGCTGATTT
TGAATGGTGAAGATTGTATGAGCTTCCACGCGCGCGCCTCGGAATGTCTT
TCTCAGATCAACAATCTCCTCCAATATGGTGCAAGCAAGTGGGGAGCAAC
CAGCATACTTGGAGACTTCCAGCAAATGTGCGAGCCCGCCCGGAGCCGTC
TATTACATGCATCGAACCCATATCTGGCAGGTTCTGGGGCCTATATGGCT
GGCTACGCTTCATTGGTGCCTGCAGGAACAGGATACCTAGGCTTTGACAT
TGGATAA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:1721097..1723103- >CAN33_38875-T1 ID=CAN33_38875-T1|Name=CAN33_38875-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7212bp|location=Sequence derived from alignment at NKJJ01000017.1:1721097..1723103- (Aspergillus niger FDAARGOS_311)
AGGAATAAGCACTGCCTTTGAAAGAACCTTCTCGTTCTCGGACGATTCCG
TCGATGTTGCTTTGCCGTCTTCTGCCACGTCCCTAGGGGCTTCACTAACC
GAAAAGAGCCATATATTTTTACGAAGCTCGGAGCCTGCGTGGCACATCGT
CAGAATTCGCCAAATACTGTCGGAGGGTTACCAGAGAAGATATTTTCATG
AACACGAGACTTCTCTTCAAGCTCCGGCCTCGACGTGGGCTCTCTGCTCA
AAAGCATACGAGTGGTTTGATAAAATCCCGAGTAATATACCAAACCACTT
CCCCATCCTGTACCGATTGGAGCTATCATACGCGATAGTCGTGATTCTCT
CTGCTGGCGACGAACAGACCACACTATGTGATTACAGCAAGATTGTTCTG
TTCCATTGCTGCATGCGGTACATCAAAGAACTCTATGAGGTGCTGAAGAA
CCCTGCCTGGCTGCCCCTGATGACCTTCCTGGATATTCAGAGGACGTATC
AAGTTGGCCGACGATTCATACGAGATGTGACAGAAAACCAGGACCTTCTC
TTGAACCCGTCGATACCCGCATTACCCTCAATTCCTCCGGAGACCCCGGA
ACAGCTGATTTTGAATGGTGAAGATTGTATGAGCTTCCACGCGCGCGCCT
CGGAATGTCTTTCTCAGATCAACAATCTCCTCCAATATGGTGCAAGCAAG
TGGGGAGCAACCAGCATACTTGGAGACTTCCAGCAAATGTGCGAGCCCGC
CCGGAGCCGTCTATTACATGCATCGAACCCATATCTGGCAGGTTCTGGGG
CCTATATGGCTGGCTACGCTTCATTGGTGCCTGCAGGAACAGGATACCTA
GGCTTTGACATTGGATAAAGCGTTGTCTCATGTTTCAATGGCAATGAATC
AAGCCGAGGACGTCGTCCGTCCCGGTACTATAGCCGGTATCCAGTCAATC
CTCCTGCTTGCCCAATATTCCTTATTCGACCCCCAACACTTTCGCAGCTG
GTACTTAGTAGGGATGGCTGTCAGGGTAATGGTCGATCTAGGCCTACACC
AGGACCCGCCTTTGGATGTTCAGTCAGCCTCGGAGCAGTTGGACCTGCGC
CGCCGTGTTTTCCATTGTGTCTATTGCTTGGATAGGTCCGTCAATGCGAC
TTCGAGAGACTTCCATGGGATTACTTCGAATACGTCTTTCGCCAATCTTC
TTCTGTCCCTGTCTCAAGCTGAGTCGATACCAAGAACGACGGCGCAGTCA
ATACCGCCACGCCATGAGATAATGCCCGTGCTACAACACTATTTCGACAA
CATCTACATACAGCTTCCATTTTTCGCCGAAACGAGCTTCTGGACATCTG
TGGATGCGGTCTACCAAGCTGGGGGCGCTTTGCCAAGCCCTTTGACAAGT
GGATTATGTCGGCTACTTCATTTCTGGACAAACCACTCCTCAAAGTCAGT
CGACCAGTGGCTGCTTGCTCAAGATGCCGAACAGCCAAAATCAAATGTGA
CGGGAAGCTTCCGGCCTGCTCCGCGTGCGAAAGGGTCGGGAAAGCGAGCA
CCTGCTCCGGCGCAAGTGACGAATTCGCCAGAGGAAAGGAAAGAAGCTAT
GTCGCCTCTTTGGAAGGTTACTGCGAACGACTCAAAACGAAGATTGACGA
TCTTCGCCGCCTCAAAACATCATTATCAGTGGACGAAAGGGGTGTCGCCC
ATCAAAGTTCGATCACCTCCATCTCCTCGGCAGGTACTGTTGCACAGGAA
GGTGGCAAAGAAGTGACTGACATCGATGACCTCGTTGGTGATTTTGGCTT
CTTAGGAATAAGCACTGCCTTTGAAAGAACCTTCTCGTTCTCGGACGATT
CCGTCGATGTTGCTTTGCCGTCTTCTGCCACGTCCCTAGGGGCTTCACTA
ACCGAAAAGAGCCATATATTTTTACGAAGCTCGGAGCCTGCGTGGCACAT
CGTCAGAATTCGCCAAATACTGTCGGAGGGTTACCAGAGAAGATATTTTC
ATGAACACGAGACTTCTCTTCAAGCTCCGGCCTCGACGTGGGCTCTCTGC
TCAAAAGCATACGAGTGGTTTGATAAAATCCCGAGTAATATACCAAACCA
CTTCCCCATCCTGTACCGATTGGAGCTATCATACGCGATAGTCGTGATTC
TCTCTGCTGGCGACGAACAGACCACACTATGTGATTACAGCAAGATTGTT
CTGTTCCATTGCTGCATGCGGTACATCAAAGAACTCTATGAGGTGCTGAA
GAACCCTGCCTGGCTGCCCCTGATGACCTTCCTGGATATTCAGAGGACGT
ATCAAGTTGGCCGACGATTCATACGAGATGTGACAGAAAACCAGGACCTT
CTCTTGAACCCGTCGATACCCGCATTACCCTCAATTCCTCCGGAGACCCC
GGAACAGCTGATTTTGAATGGTGAAGATTGTATGAGCTTCCACGCGCGCG
CCTCGGAATGTCTTTCTCAGATCAACAATCTCCTCCAATATGGTGCAAGC
AAGTGGGGAGCAACCAGCATACTTGGAGACTTCCAGCAAATGTGCGAGCC
CGCCCGGAGCCGTCTATTACATGCATCGAACCCATATCTGGCAGGTTCTG
GGGCCTATATGGCTGGCTACGCTTCATTGGTGCCTGCAGGAACAGGATAC
CTAGGCTTTGACATTGGATAAAGCGTTGTCTCATGTTTCAATGGCAATGA
ATCAAGCCGAGGACGTCGTCCGTCCCGGTACTATAGCCGGTATCCAGTCA
ATCCTCCTGCTTGCCCAATATTCCTTATTCGACCCCCAACACTTTCGCAG
CTGGTACTTAGTAGGGATGGCTGTCAGGGTAATGGTCGATCTAGGCCTAC
ACCAGGACCCGCCTTTGGATGTTCAGTCAGCCTCGGAGCAGTTGGACCTG
CGCCGCCGTGTTTTCCATTGTGTCTATTGCTTGGATAGGTCCGTCAATGC
GACTTCGAGAGACTTCCATGGGATTACTTCGAATACGTCTTTCGCCAATC
TTCTTCTGTCCCTGTCTCAAGCTGAGTCGATACCAAGAACGACGGCGCAG
TCAATACCGCCACGCCATGAGATAATGCCCGTGCTACAACACTATTTCGA
CAACATCTACATACAGCTTCCATTTTTCGCCGAAACGAGCTTCTGGACAT
CTGTGGATGCGGTCTACCAAGCTGGGGGCGCTTTGCCAAGCCCTTTGACA
AGTGGATTATGTCGGCTACTTCATTTCTGGACAAACCACTCCTCAAAGTC
AGTCGACCAGTGGCTGCTTGCTCAAGATGCCGAACAGCCAAAATCAAATG
TGACGGGAAGCTTCCGGCCTGCTCCGCGTGCGAAAGGGTCGGGAAAGCGA
GCACCTGCTCCGGCGCAAGTGACGAATTCGCCAGAGGAAAGGAAAGAAGC
TATGTCGCCTCTTTGGAAGGTTACTGCGAACGACTCAAAACGAAGATTGA
CGATCTTCGCCGCCTCAAAACATCATTATCAGTGGACGAAAGGGGTGTCG
CCCATCAAAGTTCGATCACCTCCATCTCCTCGGCAGGTACTGTTGCACAG
GAAGGTGGCAAAGAAGTGACTGACATCGATGACCTCGTTGGTGATTTTGG
CTTCTTAGGAATAAGCACTGCCTTTGAAAGAACCTTCTCGTTCTCGGACG
ATTCCGTCGATGTTGCTTTGCCGTCTTCTGCCACGTCCCTAGGGGCTTCA
CTAACCGAAAAGAGCCATATATTTTTACGAAGCTCGGAGCCTGCGTGGCA
CATCGTCAGAATTCGCCAAATACTGTCGGAGGGTTACCAGAGAAGATATT
TTCATGAACACGAGACTTCTCTTCAAGCTCCGGCCTCGACGTGGGCTCTC
TGCTCAAAAGCATACGAGTGGTTTGATAAAATCCCGAGTAATATACCAAA
CCACTTCCCCATCCTGTACCGATTGGAGCTATCATACGCGATAGTCGTGA
TTCTCTCTGCTGGCGACGAACAGACCACACTATGTGATTACAGCAAGATT
GTTCTGTTCCATTGCTGCATGCGGTACATCAAAGAACTCTATGAGGTGCT
GAAGAACCCTGCCTGGCTGCCCCTGATGACCTTCCTGGATATTCAGAGGA
CGTATCAAGTTGGCCGACGATTCATACGAGATGTGACAGAAAACCAGGAC
CTTCTCTTGAACCCGTCGATACCCGCATTACCCTCAATTCCTCCGGAGAC
CCCGGAACAGCTGATTTTGAATGGTGAAGATTGTATGAGCTTCCACGCGC
GCGCCTCGGAATGTCTTTCTCAGATCAACAATCTCCTCCAATATGGTGCA
AGCAAGTGGGGAGCAACCAGCATACTTGGAGACTTCCAGCAAATGTGCGA
GCCCGCCCGGAGCCGTCTATTACATGCATCGAACCCATATCTGGCAGGTT
CTGGGGCCTATATGGCTGGCTACGCTTCATTGGTGCCTGCAGGAACAGGA
TACCTAGGCTTTGACATTGGATAAAGCGTTGTCTCATGTTTCAATGGCAA
TGAATCAAGCCGAGGACGTCGTCCGTCCCGGTACTATAGCCGGTATCCAG
TCAATCCTCCTGCTTGCCCAATATTCCTTATTCGACCCCCAACACTTTCG
CAGCTGGTACTTAGTAGGGATGGCTGTCAGGGTAATGGTCGATCTAGGCC
TACACCAGGACCCGCCTTTGGATGTTCAGTCAGCCTCGGAGCAGTTGGAC
CTGCGCCGCCGTGTTTTCCATTGTGTCTATTGCTTGGATAGGTCCGTCAA
TGCGACTTCGAGAGACTTCCATGGGATTACTTCGAATACGTCTTTCGCCA
ATCTTCTTCTGTCCCTGTCTCAAGCTGAGTCGATACCAAGAACGACGGCG
CAGTCAATACCGCCACGCCATGAGATAATGCCCGTGCTACAACACTATTT
CGACAACATCTACATACAGCTTCCATTTTTCGCCGAAACGAGCTTCTGGA
CATCTGTGGATGCGGTCTACCAAGCTGGGGGCGCTTTGCCAAGCCCTTTG
ACAAGTGGATTATGTCGGCTACTTCATTTCTGGACAAACCACTCCTCAAA
GTCAGTCGACCAGTGGCTGCTTGCTCAAGATGCCGAACAGCCAAAATCAA
ATGTGACGGGAAGCTTCCGGCCTGCTCCGCGTGCGAAAGGGTCGGGAAAG
CGAGCACCTGCTCCGGCGCAAGTGACGAATTCGCCAGAGGAAAGGAAAGA
AGCTATGTCGCCTCTTTGGAAGGTTACTGCGAACGACTCAAAACGAAGAT
TGACGATCTTCGCCGCCTCAAAACATCATTATCAGTGGACGAAAGGGGTG
TCGCCCATCAAAGTTCGATCACCTCCATCTCCTCGGCAGGTACTGTTGCA
CAGGAAGGTGGCAAAGAAGTGACTGACATCGATGACCTCGTTGGTGATTT
TGGCTTCTTAGGAATAAGCACTGCCTTTGAAAGAACCTTCTCGTTCTCGG
ACGATTCCGTCGATGTTGCTTTGCCGTCTTCTGCCACGTCCCTAGGGGCT
TCACTAACCGAAAAGAGCCATATATTTTTACGAAGCTCGGAGCCTGCGTG
GCACATCGTCAGAATTCGCCAAATACTGTCGGAGGGTTACCAGAGAAGAT
ATTTTCATGAACACGAGACTTCTCTTCAAGCTCCGGCCTCGACGTGGGCT
CTCTGCTCAAAAGCATACGAGTGGTTTGATAAAATCCCGAGTAATATACC
AAACCACTTCCCCATCCTGTACCGATTGGAGCTATCATACGCGATAGTCG
TGATTCTCTCTGCTGGCGACGAACAGACCACACTATGTGATTACAGCAAG
ATTGTTCTGTTCCATTGCTGCATGCGGTACATCAAAGAACTCTATGAGGT
GCTGAAGAACCCTGCCTGGCTGCCCCTGATGACCTTCCTGGATATTCAGA
GGACGTATCAAGTTGGCCGACGATTCATACGAGATGTGACAGAAAACCAG
GACCTTCTCTTGAACCCGTCGATACCCGCATTACCCTCAATTCCTCCGGA
GACCCCGGAACAGCTGATTTTGAATGGTGAAGATTGTATGAGCTTCCACG
CGCGCGCCTCGGAATGTCTTTCTCAGATCAACAATCTCCTCCAATATGGT
GCAAGCAAGTGGGGAGCAACCAGCATACTTGGAGACTTCCAGCAAATGTG
CGAGCCCGCCCGGAGCCGTCTATTACATGCATCGAACCCATATCTGGCAG
GTTCTGGGGCCTATATGGCTGGCTACGCTTCATTGGTGCCTGCAGGAACA
GGATACCTAGGCTTTGACATTGGATAAAGCGTTGTCTCATGTTTCAATGG
CAATGAATCAAGCCGAGGACGTCGTCCGTCCCGGTACTATAGCCGGTATC
CAGTCAATCCTCCTGCTTGCCCAATATTCCTTATTCGACCCCCAACACTT
TCGCAGCTGGTACTTAGTAGGGATGGCTGTCAGGGTAATGGTCGATCTAG
GCCTACACCAGGACCCGCCTTTGGATGTTCAGTCAGCCTCGGAGCAGTTG
GACCTGCGCCGCCGTGTTTTCCATTGTGTCTATTGCTTGGATAGGTCCGT
CAATGCGACTTCGAGAGACTTCCATGGGATTACTTCGAATACGTCTTTCG
CCAATCTTCTTCTGTCCCTGTCTCAAGCTGAGTCGATACCAAGAACGACG
GCGCAGTCAATACCGCCACGCCATGAGATAATGCCCGTGCTACAACACTA
TTTCGACAACATCTACATACAGCTTCCATTTTTCGCCGAAACGAGCTTCT
GGACATCTGTGGATGCGGTCTACCAAGCTGGGGGCGCTTTGCCAAGCCCT
TTGACAAGTGGATTATGTCGGCTACTTCATTTCTGGACAAACCACTCCTC
AAAGTCAGTCGACCAGTGGCTGCTTGCTCAAGATGCCGAACAGCCAAAAT
CAAATGTGACGGGAAGCTTCCGGCCTGCTCCGCGTGCGAAAGGGTCGGGA
AAGCGAGCACCTGCTCCGGCGCAAGTGACGAATTCGCCAGAGGAAAGGAA
AGAAGCTATGTCGCCTCTTTGGAAGGTTACTGCGAACGACTCAAAACGAA
GATTGACGATCTTCGCCGCCTCAAAACATCATTATCAGTGGACGAAAGGG
GTGTCGCCCATCAAAGTTCGATCACCTCCATCTCCTCGGCAGGTACTGTT
GCACAGGAAGGTGGCAAAGAAGTGACTGACATCGATGACCTCGTTGGTGA
TTTTGGCTTCTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
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| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
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| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | Fungal specific transcription factor domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| NKJJ01000017.1 | supercontig | NKJJ01000017.1:1721097..1723103 - |
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