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CAN33_38995-T1, CAN33_38995-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_38995-T1
Unique NameCAN33_38995-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1805489..1806657-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_38995-T1 ID=CAN33_38995-T1|Name=CAN33_38995-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1169bp|location=Sequence derived from alignment at NKJJ01000017.1:1805489..1806657- (Aspergillus niger FDAARGOS_311)
ATGGCTGGGAACGCCGGTGCCGGTAATTCCGCTCAAGGGGCTGGTGCAGG
GGGCATTGGTGGGGATGGTGCTTTGCCCGGTGCGGTGTCCGTGATGGATG
GTGGCATCAGTGATGAGAATCGGAAAGTTTTCATCTGGGTCGCAGAACTC
CTCGATCCGAGTCGCAGAGAAGCAGCTCTCATGGAGCTTAGCAAGAAGAG
AGAGCAAGTGCCGGAACTTGCGTTGGTTATCTGGCACTCTTTCGGTACGG
AAACCCCCCTTTGATCGGCTTTGTTGGTGGCGACTAACGGGCGTTTTTTC
AGGCGTCATGACCGCTTTACTCCAGGAAATTATCTCTGTATACCCGTTGT
TGAACCCTTCGCAACTGACTGCGGCTGCATCAAATCGAGTTTGCAATGCG
CTTGCTCTCTTGCAGTGTGTGGCTTCCCACAACGAGACTCGCACCTTATT
TCTAAATGGTACGCAGCCGTCACCTAGGAGCCATCCACCCCACCCTTCGT
TTCCAAGTAGTGTGTGCTTTGACTCACAAAATCTCTTTCGCAACAGCTCA
CATTCCTCTGTTTCTCTATCCTTTCCTCAACACAACGTCAAAGTCGCGGC
CCTTCGAGTATCTCCGCCTCACCTCGCTCGGCGTAATCGGAGCGTTGGTC
AAGAATGACTCATCCGATGTCATCAACTTCCTCCTTACCACAGAGATCAT
CCCTCTTTGCCTACGAATTATGGAGACCGGCTCAGAACTTAGCAAGACCG
TTGCAATTTTCATCGTGCAGAAGATTCTCCTCGACGACATCGGCCTCGCG
TATATTTGCGCAACGTATGAGAGGTTCTATGCAGTTGGAACCGTTCTGAG
TAATATGGTTACTCAACTTGTTGAGCAACAGACAGTACGGCTTCTCAAGC
ATGTAGTGCGCTGCTTCCTTCGGTGAGTCCTGCCACGATTTTCCTTGTAT
CGCGTAACTCGGTTTGGTTCTTCAAATGCTGACTTCTGTAGCTTGAGTGA
TAACAGCAGGGCGCGAGAGGCGTTGCGTCAATGCCTTCCCGAACCTTTGC
GCGATGCGACATTCTCCTCCGTACTCCGCGACGACGCCGCCACTAAGCGC
TGCTTGGCACAGCTTCTCATCAACCTTTCGGATAACGTCTCCGATGGCGC
ACCTGGTGTTGCGATGTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1805489..1806657-

>CAN33_38995-T1 ID=CAN33_38995-T1|Name=CAN33_38995-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3816bp|location=Sequence derived from alignment at NKJJ01000017.1:1805489..1806657- (Aspergillus niger FDAARGOS_311)
CTTGAGTGATAACAGCAGGGCGCGAGAGGCGTTGCGTCAATGCCTTCCCG
AACCTTTGCGCGATGCGACATTCTCCTCCGTACTCCGCGACGACGCCGCC
ACTAAGCGCTGCTTGGCACAGCTTCTCATCAACCTTTCGGATAACGTCTC
CGATGGCGCACCTGGTGTTGCGATGTAACTCACATTCCTCTGTTTCTCTA
TCCTTTCCTCAACACAACGTCAAAGTCGCGGCCCTTCGAGTATCTCCGCC
TCACCTCGCTCGGCGTAATCGGAGCGTTGGTCAAGAATGACTCATCCGAT
GTCATCAACTTCCTCCTTACCACAGAGATCATCCCTCTTTGCCTACGAAT
TATGGAGACCGGCTCAGAACTTAGCAAGACCGTTGCAATTTTCATCGTGC
AGAAGATTCTCCTCGACGACATCGGCCTCGCGTATATTTGCGCAACGTAT
GAGAGGTTCTATGCAGTTGGAACCGTTCTGAGTAATATGGTTACTCAACT
TGTTGAGCAACAGACAGTACGGCTTCTCAAGCATGTAGTGCGCTGCTTCC
TTCGGCGTCATGACCGCTTTACTCCAGGAAATTATCTCTGTATACCCGTT
GTTGAACCCTTCGCAACTGACTGCGGCTGCATCAAATCGAGTTTGCAATG
CGCTTGCTCTCTTGCAGTGTGTGGCTTCCCACAACGAGACTCGCACCTTA
TTTCTAAATGATGGCTGGGAACGCCGGTGCCGGTAATTCCGCTCAAGGGG
CTGGTGCAGGGGGCATTGGTGGGGATGGTGCTTTGCCCGGTGCGGTGTCC
GTGATGGATGGTGGCATCAGTGATGAGAATCGGAAAGTTTTCATCTGGGT
CGCAGAACTCCTCGATCCGAGTCGCAGAGAAGCAGCTCTCATGGAGCTTA
GCAAGAAGAGAGAGCAAGTGCCGGAACTTGCGTTGGTTATCTGGCACTCT
TTCGCTTGAGTGATAACAGCAGGGCGCGAGAGGCGTTGCGTCAATGCCTT
CCCGAACCTTTGCGCGATGCGACATTCTCCTCCGTACTCCGCGACGACGC
CGCCACTAAGCGCTGCTTGGCACAGCTTCTCATCAACCTTTCGGATAACG
TCTCCGATGGCGCACCTGGTGTTGCGATGTAACTCACATTCCTCTGTTTC
TCTATCCTTTCCTCAACACAACGTCAAAGTCGCGGCCCTTCGAGTATCTC
CGCCTCACCTCGCTCGGCGTAATCGGAGCGTTGGTCAAGAATGACTCATC
CGATGTCATCAACTTCCTCCTTACCACAGAGATCATCCCTCTTTGCCTAC
GAATTATGGAGACCGGCTCAGAACTTAGCAAGACCGTTGCAATTTTCATC
GTGCAGAAGATTCTCCTCGACGACATCGGCCTCGCGTATATTTGCGCAAC
GTATGAGAGGTTCTATGCAGTTGGAACCGTTCTGAGTAATATGGTTACTC
AACTTGTTGAGCAACAGACAGTACGGCTTCTCAAGCATGTAGTGCGCTGC
TTCCTTCGGCGTCATGACCGCTTTACTCCAGGAAATTATCTCTGTATACC
CGTTGTTGAACCCTTCGCAACTGACTGCGGCTGCATCAAATCGAGTTTGC
AATGCGCTTGCTCTCTTGCAGTGTGTGGCTTCCCACAACGAGACTCGCAC
CTTATTTCTAAATGATGGCTGGGAACGCCGGTGCCGGTAATTCCGCTCAA
GGGGCTGGTGCAGGGGGCATTGGTGGGGATGGTGCTTTGCCCGGTGCGGT
GTCCGTGATGGATGGTGGCATCAGTGATGAGAATCGGAAAGTTTTCATCT
GGGTCGCAGAACTCCTCGATCCGAGTCGCAGAGAAGCAGCTCTCATGGAG
CTTAGCAAGAAGAGAGAGCAAGTGCCGGAACTTGCGTTGGTTATCTGGCA
CTCTTTCGCTTGAGTGATAACAGCAGGGCGCGAGAGGCGTTGCGTCAATG
CCTTCCCGAACCTTTGCGCGATGCGACATTCTCCTCCGTACTCCGCGACG
ACGCCGCCACTAAGCGCTGCTTGGCACAGCTTCTCATCAACCTTTCGGAT
AACGTCTCCGATGGCGCACCTGGTGTTGCGATGTAACTCACATTCCTCTG
TTTCTCTATCCTTTCCTCAACACAACGTCAAAGTCGCGGCCCTTCGAGTA
TCTCCGCCTCACCTCGCTCGGCGTAATCGGAGCGTTGGTCAAGAATGACT
CATCCGATGTCATCAACTTCCTCCTTACCACAGAGATCATCCCTCTTTGC
CTACGAATTATGGAGACCGGCTCAGAACTTAGCAAGACCGTTGCAATTTT
CATCGTGCAGAAGATTCTCCTCGACGACATCGGCCTCGCGTATATTTGCG
CAACGTATGAGAGGTTCTATGCAGTTGGAACCGTTCTGAGTAATATGGTT
ACTCAACTTGTTGAGCAACAGACAGTACGGCTTCTCAAGCATGTAGTGCG
CTGCTTCCTTCGGCGTCATGACCGCTTTACTCCAGGAAATTATCTCTGTA
TACCCGTTGTTGAACCCTTCGCAACTGACTGCGGCTGCATCAAATCGAGT
TTGCAATGCGCTTGCTCTCTTGCAGTGTGTGGCTTCCCACAACGAGACTC
GCACCTTATTTCTAAATGATGGCTGGGAACGCCGGTGCCGGTAATTCCGC
TCAAGGGGCTGGTGCAGGGGGCATTGGTGGGGATGGTGCTTTGCCCGGTG
CGGTGTCCGTGATGGATGGTGGCATCAGTGATGAGAATCGGAAAGTTTTC
ATCTGGGTCGCAGAACTCCTCGATCCGAGTCGCAGAGAAGCAGCTCTCAT
GGAGCTTAGCAAGAAGAGAGAGCAAGTGCCGGAACTTGCGTTGGTTATCT
GGCACTCTTTCGCTTGAGTGATAACAGCAGGGCGCGAGAGGCGTTGCGTC
AATGCCTTCCCGAACCTTTGCGCGATGCGACATTCTCCTCCGTACTCCGC
GACGACGCCGCCACTAAGCGCTGCTTGGCACAGCTTCTCATCAACCTTTC
GGATAACGTCTCCGATGGCGCACCTGGTGTTGCGATGTAACTCACATTCC
TCTGTTTCTCTATCCTTTCCTCAACACAACGTCAAAGTCGCGGCCCTTCG
AGTATCTCCGCCTCACCTCGCTCGGCGTAATCGGAGCGTTGGTCAAGAAT
GACTCATCCGATGTCATCAACTTCCTCCTTACCACAGAGATCATCCCTCT
TTGCCTACGAATTATGGAGACCGGCTCAGAACTTAGCAAGACCGTTGCAA
TTTTCATCGTGCAGAAGATTCTCCTCGACGACATCGGCCTCGCGTATATT
TGCGCAACGTATGAGAGGTTCTATGCAGTTGGAACCGTTCTGAGTAATAT
GGTTACTCAACTTGTTGAGCAACAGACAGTACGGCTTCTCAAGCATGTAG
TGCGCTGCTTCCTTCGGCGTCATGACCGCTTTACTCCAGGAAATTATCTC
TGTATACCCGTTGTTGAACCCTTCGCAACTGACTGCGGCTGCATCAAATC
GAGTTTGCAATGCGCTTGCTCTCTTGCAGTGTGTGGCTTCCCACAACGAG
ACTCGCACCTTATTTCTAAATGATGGCTGGGAACGCCGGTGCCGGTAATT
CCGCTCAAGGGGCTGGTGCAGGGGGCATTGGTGGGGATGGTGCTTTGCCC
GGTGCGGTGTCCGTGATGGATGGTGGCATCAGTGATGAGAATCGGAAAGT
TTTCATCTGGGTCGCAGAACTCCTCGATCCGAGTCGCAGAGAAGCAGCTC
TCATGGAGCTTAGCAAGAAGAGAGAGCAAGTGCCGGAACTTGCGTTGGTT
ATCTGGCACTCTTTCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RCD1CAN33_38995Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38995-T1CAN33_38995-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38995-T1.cdsCAN33_38995-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38995-T1.exon4CAN33_38995-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_38995-T1.exon3CAN33_38995-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_38995-T1.exon2CAN33_38995-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_38995-T1.exon1CAN33_38995-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09263Q8J
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR011989
DBxrefPFAM:PF04078
ProductCell differentiation protein rcd1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1805489..1806657 -
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