You are here

CAN33_39020-T1, CAN33_39020-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_39020-T1
Unique NameCAN33_39020-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1816440..1817157+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_39020-T1 ID=CAN33_39020-T1|Name=CAN33_39020-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=718bp|location=Sequence derived from alignment at NKJJ01000017.1:1816440..1817157+ (Aspergillus niger FDAARGOS_311)
ATGCGTTCTCTCCAGATCTTGGCTTCCACTCTTGCTGTCGGCCTCGCGGC CGCGGCGACTCCCTCCTCCTTTACTCCGTCCGTCGATGCGGATGTTGGCG TGGTTTTCACCAAAGATGGGAGCCATCTAACTCTCACTTCGGGGGCCTTA ATCAACCAGAACTGTAAGAAAAATTGCTTCTGACACACATGAACCCTTTG CATTCCGTGCTCACAACGCTTCCACAGGGACCATCAACATTCCCACCTTG TACCTGGAGGACACCACCTCCACTGATGACGAGTACGTCATCATCATGAT CGACCCAACCATCAATGAGGATGGTGTCTCAACAGCCGCCCTACACTGGT ACCAGCCCTACTTAGCCTACTCGTCTGGTGTCTTGGAAATCAGCAACAAG AGCGCCCCAAACGCGGAGTATGTCTACCCGACACCGCTGGAAGGACCTGC CCACGATTACATCCTGCTGCTGTACAGCCAGCCAGAAGACTACTCCCTGC CCGACTGCCTCGAGAGCTTGCTGCCTGCAACAGATGCGGCCCGTCTTGGG TTCAACATTGATGAGTTCGAGGAAGTAACGGGCTTGGGTACTCCCGTGGC GGCGAATTGGTTTCAAGTCGTGAACCCGACCCCTGCAACTACCACCTATG CTATCACGTCTACTCTCGTTTCCACATATGCGTGTGAGGCCACCGCCACG GCTACTTCTAGCTCATGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:1816440..1817157+

>CAN33_39020-T1 ID=CAN33_39020-T1|Name=CAN33_39020-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1308bp|location=Sequence derived from alignment at NKJJ01000017.1:1816440..1817157+ (Aspergillus niger FDAARGOS_311)
ATGCGTTCTCTCCAGATCTTGGCTTCCACTCTTGCTGTCGGCCTCGCGGC
CGCGGCGACTCCCTCCTCCTTTACTCCGTCCGTCGATGCGGATGTTGGCG
TGGTTTTCACCAAAGATGGGAGCCATCTAACTCTCACTTCGGGGGCCTTA
ATCAACCAGAACTGGACCATCAACATTCCCACCTTGTACCTGGAGGACAC
CACCTCCACTGATGACGAGTACGTCATCATCATGATCGACCCAACCATCA
ATGAGGATGGTGTCTCAACAGCCGCCCTACACTGGTACCAGCCCTACTTA
GCCTACTCGTCTGGTGTCTTGGAAATCAGCAACAAGAGCGCCCCAAACGC
GGAGTATGTCTACCCGACACCGCTGGAAGGACCTGCCCACGATTACATCC
TGCTGCTGTACAGCCAGCCAGAAGACTACTCCCTGCCCGACTGCCTCGAG
AGCTTGCTGCCTGCAACAGATGCGGCCCGTCTTGGGTTCAACATTGATGA
GTTCGAGGAAGTAACGGGCTTGGGTACTCCCGTGGCGGCGAATTGGTTTC
AAGTCGTGAACCCGACCCCTGCAACTACCACCTATGCTATCACGTCTACT
CTCGTTTCCACATATGCGTGTGAGGCCACCGCCACGGCTACTTCTAGCTC
ATGAATGCGTTCTCTCCAGATCTTGGCTTCCACTCTTGCTGTCGGCCTCG
CGGCCGCGGCGACTCCCTCCTCCTTTACTCCGTCCGTCGATGCGGATGTT
GGCGTGGTTTTCACCAAAGATGGGAGCCATCTAACTCTCACTTCGGGGGC
CTTAATCAACCAGAACTGGACCATCAACATTCCCACCTTGTACCTGGAGG
ACACCACCTCCACTGATGACGAGTACGTCATCATCATGATCGACCCAACC
ATCAATGAGGATGGTGTCTCAACAGCCGCCCTACACTGGTACCAGCCCTA
CTTAGCCTACTCGTCTGGTGTCTTGGAAATCAGCAACAAGAGCGCCCCAA
ACGCGGAGTATGTCTACCCGACACCGCTGGAAGGACCTGCCCACGATTAC
ATCCTGCTGCTGTACAGCCAGCCAGAAGACTACTCCCTGCCCGACTGCCT
CGAGAGCTTGCTGCCTGCAACAGATGCGGCCCGTCTTGGGTTCAACATTG
ATGAGTTCGAGGAAGTAACGGGCTTGGGTACTCCCGTGGCGGCGAATTGG
TTTCAAGTCGTGAACCCGACCCCTGCAACTACCACCTATGCTATCACGTC
TACTCTCGTTTCCACATATGCGTGTGAGGCCACCGCCACGGCTACTTCTA
GCTCATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_39020CAN33_39020Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39020-T1.exon1CAN33_39020-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_39020-T1.exon2CAN33_39020-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39020-T1.cdsCAN33_39020-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39020-T1CAN33_39020-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-18)
DBxrefInterPro:IPR035810
DBxrefInterPro:IPR036610
DBxrefInterPro:IPR008914
DBxrefPFAM:PF01161
ProductPhosphatidylethanolamine-binding protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1816440..1817157 +