You are here

Home

CAN33_39055-T1, CAN33_39055-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_39055-T1
Unique NameCAN33_39055-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1835038..1836000+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_39055-T1 ID=CAN33_39055-T1|Name=CAN33_39055-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=963bp|location=Sequence derived from alignment at NKJJ01000017.1:1835038..1836000+ (Aspergillus niger FDAARGOS_311)
ATGGCCCTTGGAATCAAGGGTTTCCTAAGTTGTCGTCGCAATGGACATGA
CTCGATTTTCCAGGTCGCTTATCTTGGCTATCTGCTAGTCGGAACTGGAA
GCTTCCTCTTCCATTCAACGTTGAAATGTAAGTGAGGTGGCATCGTGGGG
GAGGGGTAGCCTGTGTTGTTCGAAATTGCTAATCCGTGCATTGAACACAC
AGATCCCATGCAGCTGGTCGATGAACTGTCCATGATATACACCACGTGTC
TGATGTGCTATGCATCCTTCTCATACTCCAGACCGAATGGCTTCCGCGTC
GTCCTGGGCATCTTTCTTGCCAGCTTGGCAATTTTCATCACCCTTTACTA
CCACTACCTCCAGGATCCCCTGTTCCACCAGAACGCATATGGCATCTTGA
CAGCCATCGTCCTCATCCGCAGCATGTACACTATGGAGGTGACGCTTCGT
CCTCGCTGGCGTCATTCGACGGAGGAGGACAGGCTTGCGCGTGAGAAGCA
GGGCCTGCCCGTTCCGACTAAGGAACACCAACATTACGAAAACGTGCGGG
ACATCAAGACTCTCAAGACAATGTGGTTCATGGTTATCTACGGTTTGAGC
GTGTTCCTGGGCGGGTTTGCCATCTGGGGCTTGGACAATGCCTTCTGTCC
GAAGATCCGCGGATGGCGCCGGCAAGTGGGTCTTCCCTGGGGCATTCTAC
TGGAAGGCCATGGTTGGTGGTATGTTTCGCGCTGACACTATGCGTCCGAC
TGCCCTTCCAATACTAATTTTCTTACTAGGCATTTGATGACTGGCCTTGG
GGCCTATATGTACCTTGTTTGGGGCATCTGGCTCCGTCACTGCTTGAACA
ACCGCCAGGAAGAGTACCATCTGTGGTGGCCTCGCATTTGGAACATCCCC
GAGGTTCTCCGCACCGGCGCTCCAGGCAAGGGCGCGAATGGAGTGGCCAA
GAAGTCGAATTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:1835038..1836000+

>CAN33_39055-T1 ID=CAN33_39055-T1|Name=CAN33_39055-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2484bp|location=Sequence derived from alignment at NKJJ01000017.1:1835038..1836000+ (Aspergillus niger FDAARGOS_311)
ATGGCCCTTGGAATCAAGGGTTTCCTAAGTTGTCGTCGCAATGGACATGA
CTCGATTTTCCAGGTCGCTTATCTTGGCTATCTGCTAGTCGGAACTGGAA
GCTTCCTCTTCCATTCAACGTTGAAATATCCCATGCAGCTGGTCGATGAA
CTGTCCATGATATACACCACGTGTCTGATGTGCTATGCATCCTTCTCATA
CTCCAGACCGAATGGCTTCCGCGTCGTCCTGGGCATCTTTCTTGCCAGCT
TGGCAATTTTCATCACCCTTTACTACCACTACCTCCAGGATCCCCTGTTC
CACCAGAACGCATATGGCATCTTGACAGCCATCGTCCTCATCCGCAGCAT
GTACACTATGGAGGTGACGCTTCGTCCTCGCTGGCGTCATTCGACGGAGG
AGGACAGGCTTGCGCGTGAGAAGCAGGGCCTGCCCGTTCCGACTAAGGAA
CACCAACATTACGAAAACGTGCGGGACATCAAGACTCTCAAGACAATGTG
GTTCATGGTTATCTACGGTTTGAGCGTGTTCCTGGGCGGGTTTGCCATCT
GGGGCTTGGACAATGCCTTCTGTCCGAAGATCCGCGGATGGCGCCGGCAA
GTGGGTCTTCCCTGGGGCATTCTACTGGAAGGCCATGGTTGGTGGCATTT
GATGACTGGCCTTGGGGCCTATATGTACCTTGTTTGGGGCATCTGGCTCC
GTCACTGCTTGAACAACCGCCAGGAAGAGTACCATCTGTGGTGGCCTCGC
ATTTGGAACATCCCCGAGGTTCTCCGCACCGGCGCTCCAGGCAAGGGCGC
GAATGGAGTGGCCAAGAAGTCGAATTAAATGGCCCTTGGAATCAAGGGTT
TCCTAAGTTGTCGTCGCAATGGACATGACTCGATTTTCCAGGTCGCTTAT
CTTGGCTATCTGCTAGTCGGAACTGGAAGCTTCCTCTTCCATTCAACGTT
GAAATATCCCATGCAGCTGGTCGATGAACTGTCCATGATATACACCACGT
GTCTGATGTGCTATGCATCCTTCTCATACTCCAGACCGAATGGCTTCCGC
GTCGTCCTGGGCATCTTTCTTGCCAGCTTGGCAATTTTCATCACCCTTTA
CTACCACTACCTCCAGGATCCCCTGTTCCACCAGAACGCATATGGCATCT
TGACAGCCATCGTCCTCATCCGCAGCATGTACACTATGGAGGTGACGCTT
CGTCCTCGCTGGCGTCATTCGACGGAGGAGGACAGGCTTGCGCGTGAGAA
GCAGGGCCTGCCCGTTCCGACTAAGGAACACCAACATTACGAAAACGTGC
GGGACATCAAGACTCTCAAGACAATGTGGTTCATGGTTATCTACGGTTTG
AGCGTGTTCCTGGGCGGGTTTGCCATCTGGGGCTTGGACAATGCCTTCTG
TCCGAAGATCCGCGGATGGCGCCGGCAAGTGGGTCTTCCCTGGGGCATTC
TACTGGAAGGCCATGGTTGGTGGCATTTGATGACTGGCCTTGGGGCCTAT
ATGTACCTTGTTTGGGGCATCTGGCTCCGTCACTGCTTGAACAACCGCCA
GGAAGAGTACCATCTGTGGTGGCCTCGCATTTGGAACATCCCCGAGGTTC
TCCGCACCGGCGCTCCAGGCAAGGGCGCGAATGGAGTGGCCAAGAAGTCG
AATTAAATGGCCCTTGGAATCAAGGGTTTCCTAAGTTGTCGTCGCAATGG
ACATGACTCGATTTTCCAGGTCGCTTATCTTGGCTATCTGCTAGTCGGAA
CTGGAAGCTTCCTCTTCCATTCAACGTTGAAATATCCCATGCAGCTGGTC
GATGAACTGTCCATGATATACACCACGTGTCTGATGTGCTATGCATCCTT
CTCATACTCCAGACCGAATGGCTTCCGCGTCGTCCTGGGCATCTTTCTTG
CCAGCTTGGCAATTTTCATCACCCTTTACTACCACTACCTCCAGGATCCC
CTGTTCCACCAGAACGCATATGGCATCTTGACAGCCATCGTCCTCATCCG
CAGCATGTACACTATGGAGGTGACGCTTCGTCCTCGCTGGCGTCATTCGA
CGGAGGAGGACAGGCTTGCGCGTGAGAAGCAGGGCCTGCCCGTTCCGACT
AAGGAACACCAACATTACGAAAACGTGCGGGACATCAAGACTCTCAAGAC
AATGTGGTTCATGGTTATCTACGGTTTGAGCGTGTTCCTGGGCGGGTTTG
CCATCTGGGGCTTGGACAATGCCTTCTGTCCGAAGATCCGCGGATGGCGC
CGGCAAGTGGGTCTTCCCTGGGGCATTCTACTGGAAGGCCATGGTTGGTG
GCATTTGATGACTGGCCTTGGGGCCTATATGTACCTTGTTTGGGGCATCT
GGCTCCGTCACTGCTTGAACAACCGCCAGGAAGAGTACCATCTGTGGTGG
CCTCGCATTTGGAACATCCCCGAGGTTCTCCGCACCGGCGCTCCAGGCAA
GGGCGCGAATGGAGTGGCCAAGAAGTCGAATTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006672ceramide metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016811hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_39055CAN33_39055Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39055-T1.exon1CAN33_39055-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_39055-T1.exon2CAN33_39055-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_39055-T1.exon3CAN33_39055-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39055-T1.cdsCAN33_39055-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39055-T1CAN33_39055-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR008901
DBxrefPFAM:PF05875
ProductCeramidase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1835038..1836000 +
Powered by Drupal