|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:1842111..1842639- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_39070-T1 ID=CAN33_39070-T1|Name=CAN33_39070-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=529bp|location=Sequence derived from alignment at NKJJ01000017.1:1842111..1842639- (Aspergillus niger FDAARGOS_311)
ATGAGCGATGCGCGGGATATTCTAGACTGGATGGCGAAAAGTGAAGAGGA
GGGCGGTGGCGGGAAGAGAGCGGAGTGGATTGATGGTGGGAGTAAGAGTG
TTGCGTGGATTTGGTGGAAGAGGCCTGAGGAGTGGGCAGGGTTGATTGCG
GATTGGGTATGTATTCTTATATTCCGGATCATCATTCGAGATGTTGGAGG
GGAGTTGGGGGTAGAGTTGGGATTGAGGGGAGATAGTTGCTAATTGCTTA
TTTTTGCTGTATAGGTGGAAAACACTGGCCAGAAGAACGTGGTGCTTACG
GTTTATGAGTTGTTGGAGGGGGAGGCCACGATGTCGCAAGGTAGGTTAAG
TGGATTTGCTCCTAATCATTGGGTGATGCTGGTATGGTATGGTGGCTAAT
GGTTTGGCTGGAATAGAATGGCATGGGATGGACCCCGATGTGATGCACAA
GTCCCTCAATGTTCTCGTGAAACGGGGCAAGGCGCAGGTCTTCGGTAGCG
AAGGCCAGGAGGGTGTCAAGTTCTTCTAG back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:1842111..1842639- >CAN33_39070-T1 ID=CAN33_39070-T1|Name=CAN33_39070-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1026bp|location=Sequence derived from alignment at NKJJ01000017.1:1842111..1842639- (Aspergillus niger FDAARGOS_311)
TCCCTCAATGTTCTCGTGAAACGGGGCAAGGCGCAGGTCTTCGGTAGCGA
AGGCCAGGAGGGTGTCAAGTTCTTCTAGGTGGAAAACACTGGCCAGAAGA
ACGTGGTGCTTACGGTTTATGAGTTGTTGGAGGGGGAGGCCACGATGTCG
CAAGGTAGGTTAAGTGGATTTGCTCCTAATCATTGGATGAGCGATGCGCG
GGATATTCTAGACTGGATGGCGAAAAGTGAAGAGGAGGGCGGTGGCGGGA
AGAGAGCGGAGTGGATTGATGGTGGGAGTAAGAGTGTTGCGTGGATTTGG
TGGAAGAGGCCTGAGGAGTGGGCAGGGTTGATTGCGGATTGGTCCCTCAA
TGTTCTCGTGAAACGGGGCAAGGCGCAGGTCTTCGGTAGCGAAGGCCAGG
AGGGTGTCAAGTTCTTCTAGGTGGAAAACACTGGCCAGAAGAACGTGGTG
CTTACGGTTTATGAGTTGTTGGAGGGGGAGGCCACGATGTCGCAAGGTAG
GTTAAGTGGATTTGCTCCTAATCATTGGATGAGCGATGCGCGGGATATTC
TAGACTGGATGGCGAAAAGTGAAGAGGAGGGCGGTGGCGGGAAGAGAGCG
GAGTGGATTGATGGTGGGAGTAAGAGTGTTGCGTGGATTTGGTGGAAGAG
GCCTGAGGAGTGGGCAGGGTTGATTGCGGATTGGTCCCTCAATGTTCTCG
TGAAACGGGGCAAGGCGCAGGTCTTCGGTAGCGAAGGCCAGGAGGGTGTC
AAGTTCTTCTAGGTGGAAAACACTGGCCAGAAGAACGTGGTGCTTACGGT
TTATGAGTTGTTGGAGGGGGAGGCCACGATGTCGCAAGGTAGGTTAAGTG
GATTTGCTCCTAATCATTGGATGAGCGATGCGCGGGATATTCTAGACTGG
ATGGCGAAAAGTGAAGAGGAGGGCGGTGGCGGGAAGAGAGCGGAGTGGAT
TGATGGTGGGAGTAAGAGTGTTGCGTGGATTTGGTGGAAGAGGCCTGAGG
AGTGGGCAGGGTTGATTGCGGATTGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000814 | ESCRT II complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0071985 | multivesicular body sorting pathway |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR036388 |
| DBxref | InterPro:IPR008570 |
| DBxref | PFAM:PF05871 |
| Product | ESCRT-II complex subunit family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:1842111..1842639 - |
|
