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CAN33_39120-T1, CAN33_39120-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_39120-T1
Unique NameCAN33_39120-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1867893..1869176+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_39120-T1 ID=CAN33_39120-T1|Name=CAN33_39120-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1284bp|location=Sequence derived from alignment at NKJJ01000017.1:1867893..1869176+ (Aspergillus niger FDAARGOS_311)
ATGGCGCCTCCTCGACGGAACCTCCTCCCGAAAGACCGGTTTGGTCTTGC
ATTTGGTGGTCTAAAAACACAAAACTACCATGATCCCGCTGCTCGCGGGC
CTGGTTCCCATACGTATATGCCCATCCGACATATTACTATCACAGCAGAG
AAGCAAAACGCATACTGATGATGGAGGACGACGGAAAATCTAGAATTCGC
ACAATAGCCTGGAACCCTACCGGCCAACTCATTGCCACCGGCTCCGCAGA
CCGTACCCTTCGAATCTGGAACCCTGAGCGTTCGCAAGTGAAATACTCCA
CCGAACTGCGCGGCCATACTGCTGGAATTGAGAAAGTCGTGTTCAACCCC
GTTCGAGACTCCGAACTGGCTAGCTGCTCTACGGATGGAACCGTTCGCGT
TTGGGATGTCCGGTCAAAGACCTGCGTCAGTCGTCTAGACGTCGGAGGCG
AGGCATTCACCTTGTCCTGGTCTGCTGATGGAAGGGTAATGATCGTTGGC
AGGAAGGTGAGCAAAACACACACGAGCACGAAACCAATGCGCTCAGCATC
AGGGACTTGTCAATTGACCAAACGCCCAATATCTCTAGGACGACACCCTC
ATACCCATCTCCGTCGAATCCCCCTCCACCCCGACCATCCACCCAGACGG
ACCACTCAACGCTGCAGCGACGCAACAACAACAGAAGCCCACCTTCACAC
CATCAACCTACACAGCCCTAGAACCACACCCTCAACCCATCCAAACAAAC
GCAACGACCTTCTCACATCACATGTCCACCCCTTCCTCCCCAGACCTCCA
CCTCTTCGCCACGACCGGCGAAGGCACCGTCAAAATCATCTCTTACCCGT
CCTTTGACGTCCTCCACACCCTTCACGCCCACACTTCTGCTTGCCTTTCC
ATCTCCCTAGCACCCACAGGTCGCTACCTCGCCGTCGGGGGCAGCGACGC
CCTCATCTCCCTATGGGATACAACAGACTGGATCTGCAAGCGTACCGTTT
CGAGCAATAACGGTGGAGCCGTGCGTGGCGTGAGCTGGAGCTTCGACGGT
AGATTCATCTGCGGCGCTTGTGATGAGGTAGGCTGTGGTGGTAATGGGTT
GGAGATCTTCCATGCGGAAACGGGTGAGAGTGTTCATACCGTTCCTACGG
GAGGAAATGCCAATTCGGGGATTCCGGCTGTCGCGTGGCATCCTTCGAGG
TATTGGCTTGCATATTCTACTACTGCGGATGGATCGGGGCCAGGCGGTTT
GAGAATTGTAGGGGCTGCGGGTGGAAGTTTGTAG
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1867893..1869176+

>CAN33_39120-T1 ID=CAN33_39120-T1|Name=CAN33_39120-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3366bp|location=Sequence derived from alignment at NKJJ01000017.1:1867893..1869176+ (Aspergillus niger FDAARGOS_311)
ATGGCGCCTCCTCGACGGAACCTCCTCCCGAAAGACCGGTTTGGTCTTGC
ATTTGGTGGTCTAAAAACACAAAACTACCATGATCCCGCTGCTCGCGGGC
CTGGTTCCCATACAATTCGCACAATAGCCTGGAACCCTACCGGCCAACTC
ATTGCCACCGGCTCCGCAGACCGTACCCTTCGAATCTGGAACCCTGAGCG
TTCGCAAGTGAAATACTCCACCGAACTGCGCGGCCATACTGCTGGAATTG
AGAAAGTCGTGTTCAACCCCGTTCGAGACTCCGAACTGGCTAGCTGCTCT
ACGGATGGAACCGTTCGCGTTTGGGATGTCCGGTCAAAGACCTGCGTCAG
TCGTCTAGACGTCGGAGGCGAGGCATTCACCTTGTCCTGGTCTGCTGATG
GAAGGGTAATGATCGTTGGCAGGAAGGACGACACCCTCATACCCATCTCC
GTCGAATCCCCCTCCACCCCGACCATCCACCCAGACGGACCACTCAACGC
TGCAGCGACGCAACAACAACAGAAGCCCACCTTCACACCATCAACCTACA
CAGCCCTAGAACCACACCCTCAACCCATCCAAACAAACGCAACGACCTTC
TCACATCACATGTCCACCCCTTCCTCCCCAGACCTCCACCTCTTCGCCAC
GACCGGCGAAGGCACCGTCAAAATCATCTCTTACCCGTCCTTTGACGTCC
TCCACACCCTTCACGCCCACACTTCTGCTTGCCTTTCCATCTCCCTAGCA
CCCACAGGTCGCTACCTCGCCGTCGGGGGCAGCGACGCCCTCATCTCCCT
ATGGGATACAACAGACTGGATCTGCAAGCGTACCGTTTCGAGCAATAACG
GTGGAGCCGTGCGTGGCGTGAGCTGGAGCTTCGACGGTAGATTCATCTGC
GGCGCTTGTGATGAGGTAGGCTGTGGTGGTAATGGGTTGGAGATCTTCCA
TGCGGAAACGGGTGAGAGTGTTCATACCGTTCCTACGGGAGGAAATGCCA
ATTCGGGGATTCCGGCTGTCGCGTGGCATCCTTCGAGGTATTGGCTTGCA
TATTCTACTACTGCGGATGGATCGGGGCCAGGCGGTTTGAGAATTGTAGG
GGCTGCGGGTGGAAGTTTGTAGATGGCGCCTCCTCGACGGAACCTCCTCC
CGAAAGACCGGTTTGGTCTTGCATTTGGTGGTCTAAAAACACAAAACTAC
CATGATCCCGCTGCTCGCGGGCCTGGTTCCCATACAATTCGCACAATAGC
CTGGAACCCTACCGGCCAACTCATTGCCACCGGCTCCGCAGACCGTACCC
TTCGAATCTGGAACCCTGAGCGTTCGCAAGTGAAATACTCCACCGAACTG
CGCGGCCATACTGCTGGAATTGAGAAAGTCGTGTTCAACCCCGTTCGAGA
CTCCGAACTGGCTAGCTGCTCTACGGATGGAACCGTTCGCGTTTGGGATG
TCCGGTCAAAGACCTGCGTCAGTCGTCTAGACGTCGGAGGCGAGGCATTC
ACCTTGTCCTGGTCTGCTGATGGAAGGGTAATGATCGTTGGCAGGAAGGA
CGACACCCTCATACCCATCTCCGTCGAATCCCCCTCCACCCCGACCATCC
ACCCAGACGGACCACTCAACGCTGCAGCGACGCAACAACAACAGAAGCCC
ACCTTCACACCATCAACCTACACAGCCCTAGAACCACACCCTCAACCCAT
CCAAACAAACGCAACGACCTTCTCACATCACATGTCCACCCCTTCCTCCC
CAGACCTCCACCTCTTCGCCACGACCGGCGAAGGCACCGTCAAAATCATC
TCTTACCCGTCCTTTGACGTCCTCCACACCCTTCACGCCCACACTTCTGC
TTGCCTTTCCATCTCCCTAGCACCCACAGGTCGCTACCTCGCCGTCGGGG
GCAGCGACGCCCTCATCTCCCTATGGGATACAACAGACTGGATCTGCAAG
CGTACCGTTTCGAGCAATAACGGTGGAGCCGTGCGTGGCGTGAGCTGGAG
CTTCGACGGTAGATTCATCTGCGGCGCTTGTGATGAGGTAGGCTGTGGTG
GTAATGGGTTGGAGATCTTCCATGCGGAAACGGGTGAGAGTGTTCATACC
GTTCCTACGGGAGGAAATGCCAATTCGGGGATTCCGGCTGTCGCGTGGCA
TCCTTCGAGGTATTGGCTTGCATATTCTACTACTGCGGATGGATCGGGGC
CAGGCGGTTTGAGAATTGTAGGGGCTGCGGGTGGAAGTTTGTAGATGGCG
CCTCCTCGACGGAACCTCCTCCCGAAAGACCGGTTTGGTCTTGCATTTGG
TGGTCTAAAAACACAAAACTACCATGATCCCGCTGCTCGCGGGCCTGGTT
CCCATACAATTCGCACAATAGCCTGGAACCCTACCGGCCAACTCATTGCC
ACCGGCTCCGCAGACCGTACCCTTCGAATCTGGAACCCTGAGCGTTCGCA
AGTGAAATACTCCACCGAACTGCGCGGCCATACTGCTGGAATTGAGAAAG
TCGTGTTCAACCCCGTTCGAGACTCCGAACTGGCTAGCTGCTCTACGGAT
GGAACCGTTCGCGTTTGGGATGTCCGGTCAAAGACCTGCGTCAGTCGTCT
AGACGTCGGAGGCGAGGCATTCACCTTGTCCTGGTCTGCTGATGGAAGGG
TAATGATCGTTGGCAGGAAGGACGACACCCTCATACCCATCTCCGTCGAA
TCCCCCTCCACCCCGACCATCCACCCAGACGGACCACTCAACGCTGCAGC
GACGCAACAACAACAGAAGCCCACCTTCACACCATCAACCTACACAGCCC
TAGAACCACACCCTCAACCCATCCAAACAAACGCAACGACCTTCTCACAT
CACATGTCCACCCCTTCCTCCCCAGACCTCCACCTCTTCGCCACGACCGG
CGAAGGCACCGTCAAAATCATCTCTTACCCGTCCTTTGACGTCCTCCACA
CCCTTCACGCCCACACTTCTGCTTGCCTTTCCATCTCCCTAGCACCCACA
GGTCGCTACCTCGCCGTCGGGGGCAGCGACGCCCTCATCTCCCTATGGGA
TACAACAGACTGGATCTGCAAGCGTACCGTTTCGAGCAATAACGGTGGAG
CCGTGCGTGGCGTGAGCTGGAGCTTCGACGGTAGATTCATCTGCGGCGCT
TGTGATGAGGTAGGCTGTGGTGGTAATGGGTTGGAGATCTTCCATGCGGA
AACGGGTGAGAGTGTTCATACCGTTCCTACGGGAGGAAATGCCAATTCGG
GGATTCCGGCTGTCGCGTGGCATCCTTCGAGGTATTGGCTTGCATATTCT
ACTACTGCGGATGGATCGGGGCCAGGCGGTTTGAGAATTGTAGGGGCTGC
GGGTGGAAGTTTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_39120CAN33_39120Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39120-T1.exon1CAN33_39120-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_39120-T1.exon2CAN33_39120-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_39120-T1.exon3CAN33_39120-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39120-T1.cdsCAN33_39120-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39120-T1CAN33_39120-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR024977
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF12894
ProductWD domain G-beta repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1867893..1869176 +
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