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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:1873269..1874565- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_39130-T1 ID=CAN33_39130-T1|Name=CAN33_39130-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1297bp|location=Sequence derived from alignment at NKJJ01000017.1:1873269..1874565- (Aspergillus niger FDAARGOS_311)
ATGCTTCAAACTCGGTTGGCCCTGACGGGCCTTCGTCTTCCGTTTAGAAC
CTTGTCCTCGGCCGTTTCGTCCCGGGCCTATTCGACTGTCGTCCGCGAGC
AAGAGAATCCGTCCGCTGACGAGCCTGCAAGTTCGACGTTTGACCCCAGT
ATCGCCTTCGCCCCTCCACCCACTCGTGATGACGCCGGTATCCTTCTACG
TTCCTATACTCCACGAACCCCCGGTATCAGACATTTGCGCCGACCGATCA
ATGACCACCTGTGGAAAGGACGCCCGGTGCAGAAGCTGACGTTCCCCAAA
CGAGGTCAAGCCAAGGGTGGTCGTAACAACTCTGGTAGAGTGACTGTCCG
GCATCGTGGTGGTGGCCACAAGCGCCGTATACGAATGGTTGATTTTGCGC
GTGACGCTCCCGGTCCGCACGTGGTGGAACGTATCGAACATGACCCTGGT
CGGAGTGCTCACATTGCTCTTGTCCGTAGCCAGGAGACCAAGAAACTGAG
TTATATCCTGGCTGCGGAGGGTATGCGGGCTGGTGACGTTGTCCACAGTT
ACATGTCTGGTATTCCAGAGGAACTCTGGAAGAGCATGGGAGGTACTGTG
GACCCTGGTGTTCTCGCTGCCAGAACCGCATGGAGAGGAAACTGCTTGCC
GCTGCACATGATGCCTGTCGGTACTCTGGTCTTCAACGTCGGTTTACGTC
CTGGTCAGGGAGGCCAGCTCTGCCGTAGTGCTGGCACTTTTGCGACAGTC
ATTGCCAAGGGTATCGATATCAAGGCGAAGCGTGATCATTCTGACGGCCA
AGAAGGAGAAGCCGGAGCCGTTGAGCAGAAGCCTCTCACGCAACGCGAGA
GGCAAAGAAAGGAGCGCATCTCTCAACATGTTACCATCCGTCTTCAGAGT
GGTGAAGTTCGTCTGATTCATAAGGACTGCTGCGCGACTGTTGGCGTCGC
TAGCAACCCTAACCACCAGTACCGCCAGCTTGGTAAGGCTGGTCGCTCTC
GTTGGCTCAACATTCGGCCTACCGTTCGTGGTCTTGCCATGAACGCCGCC
GAACATCCTCACGGTGGTGGTCGAGGCAAGTCGAAGGGTAACGTTGACCC
GAAGAGTCCTTGGGGTATGCCGGTATGTATCCTCGCCTCGCTATTCCTTC
CTTTGCTTCCAGGCATCATCCATGCTAATGTCTTCGTTTTTACAGGCGAA
ATCCGGTTACAAGACTCGTCCCAAGTGGAAGATCAACAAGGCTGTGGTTC
ATCCCAGAGAGCGCAACCAAGGCAAGCGTCGTCGTGGATACCACTAG back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:1873269..1874565- >CAN33_39130-T1 ID=CAN33_39130-T1|Name=CAN33_39130-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2448bp|location=Sequence derived from alignment at NKJJ01000017.1:1873269..1874565- (Aspergillus niger FDAARGOS_311)
GCGAAATCCGGTTACAAGACTCGTCCCAAGTGGAAGATCAACAAGGCTGT
GGTTCATCCCAGAGAGCGCAACCAAGGCAAGCGTCGTCGTGGATACCACT
AGATGCTTCAAACTCGGTTGGCCCTGACGGGCCTTCGTCTTCCGTTTAGA
ACCTTGTCCTCGGCCGTTTCGTCCCGGGCCTATTCGACTGTCGTCCGCGA
GCAAGAGAATCCGTCCGCTGACGAGCCTGCAAGTTCGACGTTTGACCCCA
GTATCGCCTTCGCCCCTCCACCCACTCGTGATGACGCCGGTATCCTTCTA
CGTTCCTATACTCCACGAACCCCCGGTATCAGACATTTGCGCCGACCGAT
CAATGACCACCTGTGGAAAGGACGCCCGGTGCAGAAGCTGACGTTCCCCA
AACGAGGTCAAGCCAAGGGTGGTCGTAACAACTCTGGTAGAGTGACTGTC
CGGCATCGTGGTGGTGGCCACAAGCGCCGTATACGAATGGTTGATTTTGC
GCGTGACGCTCCCGGTCCGCACGTGGTGGAACGTATCGAACATGACCCTG
GTCGGAGTGCTCACATTGCTCTTGTCCGTAGCCAGGAGACCAAGAAACTG
AGTTATATCCTGGCTGCGGAGGGTATGCGGGCTGGTGACGTTGTCCACAG
TTACATGTCTGGTATTCCAGAGGAACTCTGGAAGAGCATGGGAGGTACTG
TGGACCCTGGTGTTCTCGCTGCCAGAACCGCATGGAGAGGAAACTGCTTG
CCGCTGCACATGATGCCTGTCGGTACTCTGGTCTTCAACGTCGGTTTACG
TCCTGGTCAGGGAGGCCAGCTCTGCCGTAGTGCTGGCACTTTTGCGACAG
TCATTGCCAAGGGTATCGATATCAAGGCGAAGCGTGATCATTCTGACGGC
CAAGAAGGAGAAGCCGGAGCCGTTGAGCAGAAGCCTCTCACGCAACGCGA
GAGGCAAAGAAAGGAGCGCATCTCTCAACATGTTACCATCCGTCTTCAGA
GTGGTGAAGTTCGTCTGATTCATAAGGACTGCTGCGCGACTGTTGGCGTC
GCTAGCAACCCTAACCACCAGTACCGCCAGCTTGGTAAGGCTGGTCGCTC
TCGTTGGCTCAACATTCGGCCTACCGTTCGTGGTCTTGCCATGAACGCCG
CCGAACATCCTCACGGTGGTGGTCGAGGCAAGTCGAAGGGTAACGTTGAC
CCGAAGAGTCCTTGGGGTATGCCGGCGAAATCCGGTTACAAGACTCGTCC
CAAGTGGAAGATCAACAAGGCTGTGGTTCATCCCAGAGAGCGCAACCAAG
GCAAGCGTCGTCGTGGATACCACTAGATGCTTCAAACTCGGTTGGCCCTG
ACGGGCCTTCGTCTTCCGTTTAGAACCTTGTCCTCGGCCGTTTCGTCCCG
GGCCTATTCGACTGTCGTCCGCGAGCAAGAGAATCCGTCCGCTGACGAGC
CTGCAAGTTCGACGTTTGACCCCAGTATCGCCTTCGCCCCTCCACCCACT
CGTGATGACGCCGGTATCCTTCTACGTTCCTATACTCCACGAACCCCCGG
TATCAGACATTTGCGCCGACCGATCAATGACCACCTGTGGAAAGGACGCC
CGGTGCAGAAGCTGACGTTCCCCAAACGAGGTCAAGCCAAGGGTGGTCGT
AACAACTCTGGTAGAGTGACTGTCCGGCATCGTGGTGGTGGCCACAAGCG
CCGTATACGAATGGTTGATTTTGCGCGTGACGCTCCCGGTCCGCACGTGG
TGGAACGTATCGAACATGACCCTGGTCGGAGTGCTCACATTGCTCTTGTC
CGTAGCCAGGAGACCAAGAAACTGAGTTATATCCTGGCTGCGGAGGGTAT
GCGGGCTGGTGACGTTGTCCACAGTTACATGTCTGGTATTCCAGAGGAAC
TCTGGAAGAGCATGGGAGGTACTGTGGACCCTGGTGTTCTCGCTGCCAGA
ACCGCATGGAGAGGAAACTGCTTGCCGCTGCACATGATGCCTGTCGGTAC
TCTGGTCTTCAACGTCGGTTTACGTCCTGGTCAGGGAGGCCAGCTCTGCC
GTAGTGCTGGCACTTTTGCGACAGTCATTGCCAAGGGTATCGATATCAAG
GCGAAGCGTGATCATTCTGACGGCCAAGAAGGAGAAGCCGGAGCCGTTGA
GCAGAAGCCTCTCACGCAACGCGAGAGGCAAAGAAAGGAGCGCATCTCTC
AACATGTTACCATCCGTCTTCAGAGTGGTGAAGTTCGTCTGATTCATAAG
GACTGCTGCGCGACTGTTGGCGTCGCTAGCAACCCTAACCACCAGTACCG
CCAGCTTGGTAAGGCTGGTCGCTCTCGTTGGCTCAACATTCGGCCTACCG
TTCGTGGTCTTGCCATGAACGCCGCCGAACATCCTCACGGTGGTGGTCGA
GGCAAGTCGAAGGGTAACGTTGACCCGAAGAGTCCTTGGGGTATGCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | BUSCO:EOG09262X31 |
| DBxref | InterPro:IPR008991 |
| DBxref | InterPro:IPR012340 |
| DBxref | InterPro:IPR014726 |
| DBxref | InterPro:IPR022666 |
| DBxref | InterPro:IPR014722 |
| DBxref | InterPro:IPR002171 |
| DBxref | InterPro:IPR022669 |
| DBxref | PFAM:PF03947 |
| DBxref | PFAM:PF00181 |
| Product | Ribosomal Proteins L2 C-terminal domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:1873269..1874565 - |
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