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CAN33_39165-T1, CAN33_39165-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_39165-T1
Unique NameCAN33_39165-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1889269..1889946-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_39165-T1 ID=CAN33_39165-T1|Name=CAN33_39165-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=678bp|location=Sequence derived from alignment at NKJJ01000017.1:1889269..1889946- (Aspergillus niger FDAARGOS_311)
ATGGCAGCTAAAGTGCCCAGAAACTTCAGACTGCTCGAAGAGCTGGAGAA
GGGTGAGAAGGGTCTGGGAGCTGGTAAGTGCTATTCTACTTATAGTCATA
GGAGACTCATTTCGTTGACATATTCCTATCGCTGTAACTTAGAGTCATGC
TCCTATGGTCTTGCAGATGGTGAAGACATGATGATGAGTAACTGGAACGG
AACTATTCTTGGCCCCCCTCACGTTCGTCCCACGCTTCCGACTCGCATCC
ATTATACTATACAATAGCATCACTGACATTATGAACGAGCGCAGAGTGTC
CATGAGAACAGAATTTACAGCGTCAACATCCATTGCGGTCCGGACTATCC
CGACAACCCCCCTACCATCCAATTCGTATCCCGAGTCAACTTGCCATGCG
TTGATGGCCGGAGCGGAAAGGTAAGGATTCGTTCTATTTCGACTGCTACT
ATATGGAAGATTCCAAGTCTGACTTCAATCTAGGTCGATCCTACCAAGCT
GCCCTGCTTGGCTCAGTGGAAGCGCGACTATACCATGGAAACTATTCTAG
TCGAGCTCAGAAGGTAATCATGTCCTGACCTTCAGGCCATCGGTGACTTG
ATACTAATAGTTCCTAGATATATGGCTCTGCCTCAGCACAAGAAGCTTCC
CCAGCCTCCGGAAGGCTCGAACTTCTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1889269..1889946-

>CAN33_39165-T1 ID=CAN33_39165-T1|Name=CAN33_39165-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2100bp|location=Sequence derived from alignment at NKJJ01000017.1:1889269..1889946- (Aspergillus niger FDAARGOS_311)
ATATATGGCTCTGCCTCAGCACAAGAAGCTTCCCCAGCCTCCGGAAGGCT
CGAACTTCTAAGTCGATCCTACCAAGCTGCCCTGCTTGGCTCAGTGGAAG
CGCGACTATACCATGGAAACTATTCTAGTCGAGCTCAGAAGAGTGTCCAT
GAGAACAGAATTTACAGCGTCAACATCCATTGCGGTCCGGACTATCCCGA
CAACCCCCCTACCATCCAATTCGTATCCCGAGTCAACTTGCCATGCGTTG
ATGGCCGGAGCGGAAAGAGTCATGCTCCTATGGTCTTGCAGATGGTGAAG
ACATGATGATGAGTAACTGGAACGGAACTATTCTTGGCCCCCCTCACATG
GCAGCTAAAGTGCCCAGAAACTTCAGACTGCTCGAAGAGCTGGAGAAGGG
TGAGAAGGGTCTGGGAGCTGATATATGGCTCTGCCTCAGCACAAGAAGCT
TCCCCAGCCTCCGGAAGGCTCGAACTTCTAAGTCGATCCTACCAAGCTGC
CCTGCTTGGCTCAGTGGAAGCGCGACTATACCATGGAAACTATTCTAGTC
GAGCTCAGAAGAGTGTCCATGAGAACAGAATTTACAGCGTCAACATCCAT
TGCGGTCCGGACTATCCCGACAACCCCCCTACCATCCAATTCGTATCCCG
AGTCAACTTGCCATGCGTTGATGGCCGGAGCGGAAAGAGTCATGCTCCTA
TGGTCTTGCAGATGGTGAAGACATGATGATGAGTAACTGGAACGGAACTA
TTCTTGGCCCCCCTCACATGGCAGCTAAAGTGCCCAGAAACTTCAGACTG
CTCGAAGAGCTGGAGAAGGGTGAGAAGGGTCTGGGAGCTGATATATGGCT
CTGCCTCAGCACAAGAAGCTTCCCCAGCCTCCGGAAGGCTCGAACTTCTA
AGTCGATCCTACCAAGCTGCCCTGCTTGGCTCAGTGGAAGCGCGACTATA
CCATGGAAACTATTCTAGTCGAGCTCAGAAGAGTGTCCATGAGAACAGAA
TTTACAGCGTCAACATCCATTGCGGTCCGGACTATCCCGACAACCCCCCT
ACCATCCAATTCGTATCCCGAGTCAACTTGCCATGCGTTGATGGCCGGAG
CGGAAAGAGTCATGCTCCTATGGTCTTGCAGATGGTGAAGACATGATGAT
GAGTAACTGGAACGGAACTATTCTTGGCCCCCCTCACATGGCAGCTAAAG
TGCCCAGAAACTTCAGACTGCTCGAAGAGCTGGAGAAGGGTGAGAAGGGT
CTGGGAGCTGATATATGGCTCTGCCTCAGCACAAGAAGCTTCCCCAGCCT
CCGGAAGGCTCGAACTTCTAAGTCGATCCTACCAAGCTGCCCTGCTTGGC
TCAGTGGAAGCGCGACTATACCATGGAAACTATTCTAGTCGAGCTCAGAA
GAGTGTCCATGAGAACAGAATTTACAGCGTCAACATCCATTGCGGTCCGG
ACTATCCCGACAACCCCCCTACCATCCAATTCGTATCCCGAGTCAACTTG
CCATGCGTTGATGGCCGGAGCGGAAAGAGTCATGCTCCTATGGTCTTGCA
GATGGTGAAGACATGATGATGAGTAACTGGAACGGAACTATTCTTGGCCC
CCCTCACATGGCAGCTAAAGTGCCCAGAAACTTCAGACTGCTCGAAGAGC
TGGAGAAGGGTGAGAAGGGTCTGGGAGCTGATATATGGCTCTGCCTCAGC
ACAAGAAGCTTCCCCAGCCTCCGGAAGGCTCGAACTTCTAAGTCGATCCT
ACCAAGCTGCCCTGCTTGGCTCAGTGGAAGCGCGACTATACCATGGAAAC
TATTCTAGTCGAGCTCAGAAGAGTGTCCATGAGAACAGAATTTACAGCGT
CAACATCCATTGCGGTCCGGACTATCCCGACAACCCCCCTACCATCCAAT
TCGTATCCCGAGTCAACTTGCCATGCGTTGATGGCCGGAGCGGAAAGAGT
CATGCTCCTATGGTCTTGCAGATGGTGAAGACATGATGATGAGTAACTGG
AACGGAACTATTCTTGGCCCCCCTCACATGGCAGCTAAAGTGCCCAGAAA
CTTCAGACTGCTCGAAGAGCTGGAGAAGGGTGAGAAGGGTCTGGGAGCTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SPM2CAN33_39165Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39165-T1CAN33_39165-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39165-T1.cdsCAN33_39165-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39165-T1.exon5CAN33_39165-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_39165-T1.exon4CAN33_39165-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_39165-T1.exon3CAN33_39165-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_39165-T1.exon2CAN33_39165-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_39165-T1.exon1CAN33_39165-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09264UD3
DBxrefInterPro:IPR016135
DBxrefInterPro:IPR000608
DBxrefPFAM:PF00179
ProductUbiquitin-conjugating enzyme spm2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1889269..1889946 -
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