You are here

Home

CAN33_39175-T1, CAN33_39175-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_39175-T1
Unique NameCAN33_39175-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1897106..1898219-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_39175-T1 ID=CAN33_39175-T1|Name=CAN33_39175-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1114bp|location=Sequence derived from alignment at NKJJ01000017.1:1897106..1898219- (Aspergillus niger FDAARGOS_311)
ATGACCTCCCTCTTCTTCTCCACGCCCGTCGACATCGATGTGGTCCTCGA
AGACAGCGATGAGCGTCAGACGGTTGATGTCAAGCTCGACAAGGGCCGTC
GCGAGAGGGTCCCCCTCTACATGGACGGAGAGTCTGTCAAGGGTGCTGTG
ACGGTCAGACCTAAGGATGGAAAGCGTTTGGAACACACGGGCATCAAAGT
GCAATTCATTGGCACGATCGGTATGGAACAATGGCTCTCATGAGGGGGCG
GGCACACCTCATCACCATCCCCACCGCACAGTTGCTCGAAGACTTCAAGT
CTCGATGCTGACACACAATTGTTACGATTAGAAATGTTCTATGACCGCGG
TAACCACTACGAATTCCTGTCGCTGGTACAGGAGCTCGCAGCTCCCGGAG
AACTGCAGCACCCCCAGACCTTCCCGTTCAACTTCAAGAATATCGAGAAG
CAATACGAATCATACAACGGTATCAATGTTAAGCTACGATACTTTGTCCG
CGTGACAGTGTCCAGGCGCATGGCGGACGTGATTCGGGAAAAGGACCTCT
GGGTCTACTCCTACCGCATGCCCCCGGAGACCAACAGCCCCATCAAGATG
GACGTTGGTATCGAAGATTGCCTGCACATTGAGTTCGAATACTCCAAATC
CAAGTACCACCTCAAGGATGTCATCGTGGGACGCATCTACTTCCTCCTCG
TGCGCTTGAAGATCAAACACATGGAGCTATCCATCATCCGTCGTGAGACG
ACTGGATCTCCGCCAAACCAGTACAACGAAAGTGAGACGCTCGTGCGCTT
CGAGGTAAGACTGAATCCAACTTGAATCGCTGTATGACGTCCGAAGCACT
AACATGCTGCGCGCAGATCATGGATGGATCACCTTCCCGAGGTAAGTCGA
TGGCTCGGACTCACCTGGCTCTCAGACACCGCAACACGTCACATCTGCGG
CATTGTCACAGCCGAACATCTCTTCTGACCTATTTCTAGGTGAAACCATC
CCCATCCGTCTGTTCCTGGGGGGATTTGACCTCACCCCGACATTCCGCGA
CGTGAACAAGAAGTATTCGACACGCTACTACCTCAGCCTGGTGCTTATCG
ACGAAGGTACGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:1897106..1898219-

>CAN33_39175-T1 ID=CAN33_39175-T1|Name=CAN33_39175-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3372bp|location=Sequence derived from alignment at NKJJ01000017.1:1897106..1898219- (Aspergillus niger FDAARGOS_311)
GTGAAACCATCCCCATCCGTCTGTTCCTGGGGGGATTTGACCTCACCCCG
ACATTCCGCGACGTGAACAAGAAGTATTCGACACGCTACTACCTCAGCCT
GGTGCTTATCGACGAAGGTACGTGAATCATGGATGGATCACCTTCCCGAG
AAATGTTCTATGACCGCGGTAACCACTACGAATTCCTGTCGCTGGTACAG
GAGCTCGCAGCTCCCGGAGAACTGCAGCACCCCCAGACCTTCCCGTTCAA
CTTCAAGAATATCGAGAAGCAATACGAATCATACAACGGTATCAATGTTA
AGCTACGATACTTTGTCCGCGTGACAGTGTCCAGGCGCATGGCGGACGTG
ATTCGGGAAAAGGACCTCTGGGTCTACTCCTACCGCATGCCCCCGGAGAC
CAACAGCCCCATCAAGATGGACGTTGGTATCGAAGATTGCCTGCACATTG
AGTTCGAATACTCCAAATCCAAGTACCACCTCAAGGATGTCATCGTGGGA
CGCATCTACTTCCTCCTCGTGCGCTTGAAGATCAAACACATGGAGCTATC
CATCATCCGTCGTGAGACGACTGGATCTCCGCCAAACCAGTACAACGAAA
GTGAGACGCTCGTGCGCTTCGAGATGACCTCCCTCTTCTTCTCCACGCCC
GTCGACATCGATGTGGTCCTCGAAGACAGCGATGAGCGTCAGACGGTTGA
TGTCAAGCTCGACAAGGGCCGTCGCGAGAGGGTCCCCCTCTACATGGACG
GAGAGTCTGTCAAGGGTGCTGTGACGGTCAGACCTAAGGATGGAAAGCGT
TTGGAACACACGGGCATCAAAGTGCAATTCATTGGCACGATCGGTGAAAC
CATCCCCATCCGTCTGTTCCTGGGGGGATTTGACCTCACCCCGACATTCC
GCGACGTGAACAAGAAGTATTCGACACGCTACTACCTCAGCCTGGTGCTT
ATCGACGAAGGTACGTGAATCATGGATGGATCACCTTCCCGAGAAATGTT
CTATGACCGCGGTAACCACTACGAATTCCTGTCGCTGGTACAGGAGCTCG
CAGCTCCCGGAGAACTGCAGCACCCCCAGACCTTCCCGTTCAACTTCAAG
AATATCGAGAAGCAATACGAATCATACAACGGTATCAATGTTAAGCTACG
ATACTTTGTCCGCGTGACAGTGTCCAGGCGCATGGCGGACGTGATTCGGG
AAAAGGACCTCTGGGTCTACTCCTACCGCATGCCCCCGGAGACCAACAGC
CCCATCAAGATGGACGTTGGTATCGAAGATTGCCTGCACATTGAGTTCGA
ATACTCCAAATCCAAGTACCACCTCAAGGATGTCATCGTGGGACGCATCT
ACTTCCTCCTCGTGCGCTTGAAGATCAAACACATGGAGCTATCCATCATC
CGTCGTGAGACGACTGGATCTCCGCCAAACCAGTACAACGAAAGTGAGAC
GCTCGTGCGCTTCGAGATGACCTCCCTCTTCTTCTCCACGCCCGTCGACA
TCGATGTGGTCCTCGAAGACAGCGATGAGCGTCAGACGGTTGATGTCAAG
CTCGACAAGGGCCGTCGCGAGAGGGTCCCCCTCTACATGGACGGAGAGTC
TGTCAAGGGTGCTGTGACGGTCAGACCTAAGGATGGAAAGCGTTTGGAAC
ACACGGGCATCAAAGTGCAATTCATTGGCACGATCGGTGAAACCATCCCC
ATCCGTCTGTTCCTGGGGGGATTTGACCTCACCCCGACATTCCGCGACGT
GAACAAGAAGTATTCGACACGCTACTACCTCAGCCTGGTGCTTATCGACG
AAGGTACGTGAATCATGGATGGATCACCTTCCCGAGAAATGTTCTATGAC
CGCGGTAACCACTACGAATTCCTGTCGCTGGTACAGGAGCTCGCAGCTCC
CGGAGAACTGCAGCACCCCCAGACCTTCCCGTTCAACTTCAAGAATATCG
AGAAGCAATACGAATCATACAACGGTATCAATGTTAAGCTACGATACTTT
GTCCGCGTGACAGTGTCCAGGCGCATGGCGGACGTGATTCGGGAAAAGGA
CCTCTGGGTCTACTCCTACCGCATGCCCCCGGAGACCAACAGCCCCATCA
AGATGGACGTTGGTATCGAAGATTGCCTGCACATTGAGTTCGAATACTCC
AAATCCAAGTACCACCTCAAGGATGTCATCGTGGGACGCATCTACTTCCT
CCTCGTGCGCTTGAAGATCAAACACATGGAGCTATCCATCATCCGTCGTG
AGACGACTGGATCTCCGCCAAACCAGTACAACGAAAGTGAGACGCTCGTG
CGCTTCGAGATGACCTCCCTCTTCTTCTCCACGCCCGTCGACATCGATGT
GGTCCTCGAAGACAGCGATGAGCGTCAGACGGTTGATGTCAAGCTCGACA
AGGGCCGTCGCGAGAGGGTCCCCCTCTACATGGACGGAGAGTCTGTCAAG
GGTGCTGTGACGGTCAGACCTAAGGATGGAAAGCGTTTGGAACACACGGG
CATCAAAGTGCAATTCATTGGCACGATCGGTGAAACCATCCCCATCCGTC
TGTTCCTGGGGGGATTTGACCTCACCCCGACATTCCGCGACGTGAACAAG
AAGTATTCGACACGCTACTACCTCAGCCTGGTGCTTATCGACGAAGGTAC
GTGAATCATGGATGGATCACCTTCCCGAGAAATGTTCTATGACCGCGGTA
ACCACTACGAATTCCTGTCGCTGGTACAGGAGCTCGCAGCTCCCGGAGAA
CTGCAGCACCCCCAGACCTTCCCGTTCAACTTCAAGAATATCGAGAAGCA
ATACGAATCATACAACGGTATCAATGTTAAGCTACGATACTTTGTCCGCG
TGACAGTGTCCAGGCGCATGGCGGACGTGATTCGGGAAAAGGACCTCTGG
GTCTACTCCTACCGCATGCCCCCGGAGACCAACAGCCCCATCAAGATGGA
CGTTGGTATCGAAGATTGCCTGCACATTGAGTTCGAATACTCCAAATCCA
AGTACCACCTCAAGGATGTCATCGTGGGACGCATCTACTTCCTCCTCGTG
CGCTTGAAGATCAAACACATGGAGCTATCCATCATCCGTCGTGAGACGAC
TGGATCTCCGCCAAACCAGTACAACGAAAGTGAGACGCTCGTGCGCTTCG
AGATGACCTCCCTCTTCTTCTCCACGCCCGTCGACATCGATGTGGTCCTC
GAAGACAGCGATGAGCGTCAGACGGTTGATGTCAAGCTCGACAAGGGCCG
TCGCGAGAGGGTCCCCCTCTACATGGACGGAGAGTCTGTCAAGGGTGCTG
TGACGGTCAGACCTAAGGATGGAAAGCGTTTGGAACACACGGGCATCAAA
GTGCAATTCATTGGCACGATCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VPS26CAN33_39175Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39175-T1CAN33_39175-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39175-T1.cdsCAN33_39175-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39175-T1.exon4CAN33_39175-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_39175-T1.exon3CAN33_39175-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_39175-T1.exon2CAN33_39175-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_39175-T1.exon1CAN33_39175-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG092632FC
DBxrefInterPro:IPR028934
DBxrefInterPro:IPR014752
DBxrefPFAM:PF03643
ProductVacuolar protein sorting-associated protein 26
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1897106..1898219 -
Powered by Drupal