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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:1928784..1929560- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_39245-T1 ID=CAN33_39245-T1|Name=CAN33_39245-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=777bp|location=Sequence derived from alignment at NKJJ01000017.1:1928784..1929560- (Aspergillus niger FDAARGOS_311)
ATGGATTACCAGGTAAGCACAATTATATTCTTTATATACAGACCACATTA
CTAACAAAACCCCCCTAAACAGAACCGCGCCGGTTCCAAATTTGGCGGCG
GCGGCGTCGCCTCCCACTCCGCAACGAACGCCGACCGACGCGAACGCCTC
CGCAAACTGGCCCTGGAAACGATCGACCTCGACAAAGACCCCTACTTCTT
CAAGAACCACGTCGGCAGCTTCGAATGCAGACTATGTCTCACAGTGCACC
AAAACGACGGGTCCTACCTAGCGCACACGCAGGGGCGGAAACATCAAACG
AACCTTGCGCGGCGCGCGGCGCGCGAACAGCGCGAGGGCAAGAACCAAGA
CCCGTCGTCCATTCCCGGGGCGATGGGCGTGCAGGTCAAGAAGCAGACGA
TCAAGATCGGACGGCCGGGGTACAAGATCACGAAGATTCGGGATCCGTTG
ACGAGACAGCTGGGCATGTTGTTCCAGTTGCAGTATCAGGAGATTACGCC
GGGGGTTACGCCTAAGGTGCGGTTTATGTCGGCGTTTGAGCAGAAGGTGG
AGGAGCCGCCGGACAAGAACTTTCAGTATTTGGTTGTTGCGGCGGAGCCG
TATCAGACTTGTGGGTTTAAGTTGCAGGCGAGGGAGATTGATCGGCGCGA
GGGACGGTATTGGACTTGGTTTGATGAGGATAGTAAGGAGTTTTGGGTCC
AGATTATGTTCAAGACGGAGAGAGAGGAGAGGTTCTCGGGTGTGCCGGGG
TTGGCGCCTATTGAAAATAAGGCTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:1928784..1929560- >CAN33_39245-T1 ID=CAN33_39245-T1|Name=CAN33_39245-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1434bp|location=Sequence derived from alignment at NKJJ01000017.1:1928784..1929560- (Aspergillus niger FDAARGOS_311)
AACCGCGCCGGTTCCAAATTTGGCGGCGGCGGCGTCGCCTCCCACTCCGC
AACGAACGCCGACCGACGCGAACGCCTCCGCAAACTGGCCCTGGAAACGA
TCGACCTCGACAAAGACCCCTACTTCTTCAAGAACCACGTCGGCAGCTTC
GAATGCAGACTATGTCTCACAGTGCACCAAAACGACGGGTCCTACCTAGC
GCACACGCAGGGGCGGAAACATCAAACGAACCTTGCGCGGCGCGCGGCGC
GCGAACAGCGCGAGGGCAAGAACCAAGACCCGTCGTCCATTCCCGGGGCG
ATGGGCGTGCAGGTCAAGAAGCAGACGATCAAGATCGGACGGCCGGGGTA
CAAGATCACGAAGATTCGGGATCCGTTGACGAGACAGCTGGGCATGTTGT
TCCAGTTGCAGTATCAGGAGATTACGCCGGGGGTTACGCCTAAGGTGCGG
TTTATGTCGGCGTTTGAGCAGAAGGTGGAGGAGCCGCCGGACAAGAACTT
TCAGTATTTGGTTGTTGCGGCGGAGCCGTATCAGACTTGTGGGTTTAAGT
TGCAGGCGAGGGAGATTGATCGGCGCGAGGGACGGTATTGGACTTGGTTT
GATGAGGATAGTAAGGAGTTTTGGGTCCAGATTATGTTCAAGACGGAGAG
AGAGGAGAGGTTCTCGGGTGTGCCGGGGTTGGCGCCTATTGAAAATAAGG
CTTGAATGGATTACCAGAACCGCGCCGGTTCCAAATTTGGCGGCGGCGGC
GTCGCCTCCCACTCCGCAACGAACGCCGACCGACGCGAACGCCTCCGCAA
ACTGGCCCTGGAAACGATCGACCTCGACAAAGACCCCTACTTCTTCAAGA
ACCACGTCGGCAGCTTCGAATGCAGACTATGTCTCACAGTGCACCAAAAC
GACGGGTCCTACCTAGCGCACACGCAGGGGCGGAAACATCAAACGAACCT
TGCGCGGCGCGCGGCGCGCGAACAGCGCGAGGGCAAGAACCAAGACCCGT
CGTCCATTCCCGGGGCGATGGGCGTGCAGGTCAAGAAGCAGACGATCAAG
ATCGGACGGCCGGGGTACAAGATCACGAAGATTCGGGATCCGTTGACGAG
ACAGCTGGGCATGTTGTTCCAGTTGCAGTATCAGGAGATTACGCCGGGGG
TTACGCCTAAGGTGCGGTTTATGTCGGCGTTTGAGCAGAAGGTGGAGGAG
CCGCCGGACAAGAACTTTCAGTATTTGGTTGTTGCGGCGGAGCCGTATCA
GACTTGTGGGTTTAAGTTGCAGGCGAGGGAGATTGATCGGCGCGAGGGAC
GGTATTGGACTTGGTTTGATGAGGATAGTAAGGAGTTTTGGGTCCAGATT
ATGTTCAAGACGGAGAGAGAGGAGAGGTTCTCGGGTGTGCCGGGGTTGGC
GCCTATTGAAAATAAGGCTTGAATGGATTACCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092653YS |
| DBxref | InterPro:IPR000690 |
| DBxref | InterPro:IPR031781 |
| DBxref | InterPro:IPR003604 |
| DBxref | PFAM:PF12874 |
| DBxref | PFAM:PF16835 |
| Product | Zinc-finger of C2H2 type family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:1928784..1929560 - |
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