You are here

Home

CAN33_39260-T1, CAN33_39260-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_39260-T1
Unique NameCAN33_39260-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1935746..1938040+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_39260-T1 ID=CAN33_39260-T1|Name=CAN33_39260-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2295bp|location=Sequence derived from alignment at NKJJ01000017.1:1935746..1938040+ (Aspergillus niger FDAARGOS_311)
ATGGCCACAACAAGCAAAAAGTCAGATCGACGAGTTCCACCCGAGCAACG
GAAGCGCACGGAGCACAGCTGTGACCGTTGCAAATCAAGAAAGCAGAAAT
GCCAACGGCTTCCAAATGAAGACCGCTGTGAGCATTGCATACGCATGAAC
TATGGCTGCAAGGTCACCAGGCCCCGAAAGCAACGGCTCTATGGCAGCGC
CGAGCTCGTGCGTTACAAGATTGCACTGCTTGAGGCGCTGGTAAAGGGGC
TTGTTCCCAGTGCAGACCTCAATTCCATTGAGAGCATGCGAGAACTTGGA
CAGTCCTTAGGCATTAAGCTTCCGGAAGAGGTGGATAACACGTATCCACC
CCTGCTCGAGATGATCCAAGCAAGCGAAGAAGCAAACCCGAACAAGAACG
AGGAGCTGGTTCGTGACATGGAGGGCCAGGAACAGTATATCGGGCCTGCG
AGCTCCTATTTTTTCCAGATGAAGCTCCGTGCCCTCTTGGGGCTTCATCG
CCAGGCCCAGGGAGGAAAGTTTCAGATGTACCTCTTTGGCCGCAACCCTT
CCGAGGACACCTTGAGATATGCTAGAGAGATCCTCACGGAGGCCGATATT
CGAGCAGTAGCAGAACCCCAACAAGTCGAGGTCAGCGCTAATGCTGTCCA
ATATCCTTCTCCTTTGCTCGATCGCTCCGTCATCAATGGGCTCATTCGAG
CTTACTTCGATAACGTCAACATCGACTTCCCGGTCCTCCACGAAGCCTCT
TTCTTGGAAATATACGATGTGTGGCGACTTTCCCCGCAATCCGTTGATCG
AGCGTGGGTATGTGAACTGTTGTGCGTATTGCTTCTGGGTCGGCGAATTA
GTCCGCTGGGGACAACGGAGACCCAGCAGCAAAAATGGTGGACCCACGTG
GAATCCCTTCTGCCCACAATTATTTTCACCAACAATATCCTTTCGGTCCA
GGCCTTGATGCTGGCTGCTTTGCATCTTCATAACACGAATCATCGTGATG
CCTGCTGGACCTTGACCGGGGCAGCGGCCCGCATTGCAATCGCCATTGGA
CTCCATCGAGACGAGATCATCTGTGAGGGACCTAGACTGGCTAAGGAGCT
CAGGAAATCACTGTGGTGGACACTGTATGCTTTCGAGCAGATCCAGGTCT
CTTCCCATGACCGGCCCAGTGCTATCGATAGCACCATGTGTTCTACTACC
TCGCCCCATGAGAGAGTCCTTGGTATGGGATCCTCCAACTGGCCCCCGAC
CTACACACTCTGGTCCGCACGGCTTGTTACTATCTTAGGCTTAGTATGCC
GTGCCTTACCAACTGCCACGAGCGAGAATGGTCGCACAGGTCTCCTCTCC
CCGACAGCTGGGTTGCTCCGGGATTTAAGCCGGTGGCTTTATTCCCTACC
CCAGCACCTAACTCTCAGCGTATTGAGGACCTTGCCAGATGGCTTCAAGA
GACCCGTTCTCTTGTTACACATCCAGTATCATTATACTGTATCCTTGCTC
ACTCGCTGTGCATTGCTGCAACTCCTTGCCTCCGTATCGCAGAACTCAGA
AGCTAACCCCAACGATGAAGAGGTCAAAGCGAATGCCAAGGTTTGTTGCG
AGTCTGGTAGAAAGGCTTGTGAGCTACTGCTGCAGCTGGACGAACTGGGG
AAATTCAACCCAGTGACCTGGTGGGACGTCTATTACGTGTACTCGTCGAC
TTTGGTCTTGACGTTGAGTATTCTGTGCGACCGAGCGCGGCCCGACAGCG
ACAAGACTGTCACTGACAAGGATGTTTCGTTGCTCCACGACTGTGCGAGT
ATGCTCATGCGCCATTCGTCCAACCCAATGATGCCTGCTACCATGCTTCG
CTGGACCGGCGCCATACGGGACGTTGACGTGCTGCTTAACGAAAGGTCGG
CCCCCGCTCAACCGCCACCAGTCCGCGATGATCCGGTCAACAATGAACCA
GTCTCGGAAAATGCTCTGGTCCCTCTTGGTTCGTCGATGAGAGAGATAAC
TGCTCCTTATTCTGGTATGGAAGTGGCACTAGGCCCTAGCACCGAGCTCG
CTGTGTCTCAAATGGGTTTAATTAACATGCCCTTCCAAAATTATGGAGCG
GGCATGGACCCCCTCACGGATCAGAGCGTGGCTCAGATGGATCCGACTAT
GGTGTATGCTAATGGCGGCCACATAGACCAGTTGATGTCGATGCCGCTCT
TGGGCGACGACAATGCTATCTTCTCCTGGGATTCGATTGGATCCATGTTA
CTGGGGACAGAGGCATTCAATGGTCATTTGGACTGTAATATGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:1935746..1938040+

>CAN33_39260-T1 ID=CAN33_39260-T1|Name=CAN33_39260-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2295bp|location=Sequence derived from alignment at NKJJ01000017.1:1935746..1938040+ (Aspergillus niger FDAARGOS_311)
ATGGCCACAACAAGCAAAAAGTCAGATCGACGAGTTCCACCCGAGCAACG
GAAGCGCACGGAGCACAGCTGTGACCGTTGCAAATCAAGAAAGCAGAAAT
GCCAACGGCTTCCAAATGAAGACCGCTGTGAGCATTGCATACGCATGAAC
TATGGCTGCAAGGTCACCAGGCCCCGAAAGCAACGGCTCTATGGCAGCGC
CGAGCTCGTGCGTTACAAGATTGCACTGCTTGAGGCGCTGGTAAAGGGGC
TTGTTCCCAGTGCAGACCTCAATTCCATTGAGAGCATGCGAGAACTTGGA
CAGTCCTTAGGCATTAAGCTTCCGGAAGAGGTGGATAACACGTATCCACC
CCTGCTCGAGATGATCCAAGCAAGCGAAGAAGCAAACCCGAACAAGAACG
AGGAGCTGGTTCGTGACATGGAGGGCCAGGAACAGTATATCGGGCCTGCG
AGCTCCTATTTTTTCCAGATGAAGCTCCGTGCCCTCTTGGGGCTTCATCG
CCAGGCCCAGGGAGGAAAGTTTCAGATGTACCTCTTTGGCCGCAACCCTT
CCGAGGACACCTTGAGATATGCTAGAGAGATCCTCACGGAGGCCGATATT
CGAGCAGTAGCAGAACCCCAACAAGTCGAGGTCAGCGCTAATGCTGTCCA
ATATCCTTCTCCTTTGCTCGATCGCTCCGTCATCAATGGGCTCATTCGAG
CTTACTTCGATAACGTCAACATCGACTTCCCGGTCCTCCACGAAGCCTCT
TTCTTGGAAATATACGATGTGTGGCGACTTTCCCCGCAATCCGTTGATCG
AGCGTGGGTATGTGAACTGTTGTGCGTATTGCTTCTGGGTCGGCGAATTA
GTCCGCTGGGGACAACGGAGACCCAGCAGCAAAAATGGTGGACCCACGTG
GAATCCCTTCTGCCCACAATTATTTTCACCAACAATATCCTTTCGGTCCA
GGCCTTGATGCTGGCTGCTTTGCATCTTCATAACACGAATCATCGTGATG
CCTGCTGGACCTTGACCGGGGCAGCGGCCCGCATTGCAATCGCCATTGGA
CTCCATCGAGACGAGATCATCTGTGAGGGACCTAGACTGGCTAAGGAGCT
CAGGAAATCACTGTGGTGGACACTGTATGCTTTCGAGCAGATCCAGGTCT
CTTCCCATGACCGGCCCAGTGCTATCGATAGCACCATGTGTTCTACTACC
TCGCCCCATGAGAGAGTCCTTGGTATGGGATCCTCCAACTGGCCCCCGAC
CTACACACTCTGGTCCGCACGGCTTGTTACTATCTTAGGCTTAGTATGCC
GTGCCTTACCAACTGCCACGAGCGAGAATGGTCGCACAGGTCTCCTCTCC
CCGACAGCTGGGTTGCTCCGGGATTTAAGCCGGTGGCTTTATTCCCTACC
CCAGCACCTAACTCTCAGCGTATTGAGGACCTTGCCAGATGGCTTCAAGA
GACCCGTTCTCTTGTTACACATCCAGTATCATTATACTGTATCCTTGCTC
ACTCGCTGTGCATTGCTGCAACTCCTTGCCTCCGTATCGCAGAACTCAGA
AGCTAACCCCAACGATGAAGAGGTCAAAGCGAATGCCAAGGTTTGTTGCG
AGTCTGGTAGAAAGGCTTGTGAGCTACTGCTGCAGCTGGACGAACTGGGG
AAATTCAACCCAGTGACCTGGTGGGACGTCTATTACGTGTACTCGTCGAC
TTTGGTCTTGACGTTGAGTATTCTGTGCGACCGAGCGCGGCCCGACAGCG
ACAAGACTGTCACTGACAAGGATGTTTCGTTGCTCCACGACTGTGCGAGT
ATGCTCATGCGCCATTCGTCCAACCCAATGATGCCTGCTACCATGCTTCG
CTGGACCGGCGCCATACGGGACGTTGACGTGCTGCTTAACGAAAGGTCGG
CCCCCGCTCAACCGCCACCAGTCCGCGATGATCCGGTCAACAATGAACCA
GTCTCGGAAAATGCTCTGGTCCCTCTTGGTTCGTCGATGAGAGAGATAAC
TGCTCCTTATTCTGGTATGGAAGTGGCACTAGGCCCTAGCACCGAGCTCG
CTGTGTCTCAAATGGGTTTAATTAACATGCCCTTCCAAAATTATGGAGCG
GGCATGGACCCCCTCACGGATCAGAGCGTGGCTCAGATGGATCCGACTAT
GGTGTATGCTAATGGCGGCCACATAGACCAGTTGATGTCGATGCCGCTCT
TGGGCGACGACAATGCTATCTTCTCCTGGGATTCGATTGGATCCATGTTA
CTGGGGACAGAGGCATTCAATGGTCATTTGGACTGTAATATGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_39260CAN33_39260Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39260-T1.exon1CAN33_39260-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39260-T1.cdsCAN33_39260-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39260-T1CAN33_39260-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
ProductFungal specific transcription factor domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1935746..1938040 +
Powered by Drupal