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CAN33_39315-T1, CAN33_39315-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_39315-T1
Unique NameCAN33_39315-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1964740..1965685-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_39315-T1 ID=CAN33_39315-T1|Name=CAN33_39315-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=946bp|location=Sequence derived from alignment at NKJJ01000017.1:1964740..1965685- (Aspergillus niger FDAARGOS_311)
ATGGCGGAGTATTGGAAATCAGCGGTAGGCAGAAACGTTCTCTCTCATCT
CCCGTGTCTCAGCACTGACTCCGACACAGCCCAAGTTTTGGTGCAAGCAA
TGCAAGATCTTCATTCGCGATACCGCCTTCGAAAAGTCCCAACATGAGGC
TACAGCCAAGCATCAGGGTAATCTAAAGCGCTTCCTTCGTGACATCCATC
GGAACAATGAGCAGCAACAGCGCGAAGCACAGAGAGCGAAAAATGAGGTT
GAGCGACTTCGCCAGACCGTAGCCGGGTCTGCGGGTGGAAAAGACGGGGA
TGCTGCGCCCTGGAAACGTGCGCCCGCCCCGGCGCCCAAACCTCAGGAGC
GACCTGTTTCTCTGGAAGAGAGAAAGCGACAAATGGCACAATTAGCGGAG
ATGGGTATCGCTATTCCGGAAGAATACCGCAGTGAGATGGCCCTGGCCGG
AGAATGGCAGACACTGTCGGAGAAAGTCGTACAACCTTCGGAGGAATCAA
AAGCCAGTCAATCACTAGGGGTACGCAAACGAAAGCATGAAGAGCGGGAT
GAGGAGGAAGAAGAGGCGAAACAGGAAGCCGAACGTTTTGTTAGTAAGGG
CTGGGGCTCCCGGACACGAGTGTATCCGGGTGCCCAAGAGGACACTGACC
TCGACGCTCTTTTGGAGTCGACGAAAGATATTAAAAAGGGTAAATCCGCA
GCTCCTGCGGAATCGGCGCCGGAGCCAGAGCCTGAGAAGGCGTCGGATTC
CGTCAAGAGTCAGTTCCTGCCGGTCAAGTCGGAAGGGGATGCAGCAGCTC
CTGAGACCGGTGAGCCGTCTCAAGTCAAACAGGAGAGCGAGACTGCCCCC
TCCGAGGCGGCTCCTGTGACAAAGGAGGAACCGGAAGATGCCCCAGCTAC
AGGGGTTGTTTTCAAAAAGCGCAAGGCTAAGGTTATGAGAAAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1964740..1965685-

>CAN33_39315-T1 ID=CAN33_39315-T1|Name=CAN33_39315-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2349bp|location=Sequence derived from alignment at NKJJ01000017.1:1964740..1965685- (Aspergillus niger FDAARGOS_311)
CTCCTGAGACCGGTGAGCCGTCTCAAGTCAAACAGGAGAGCGAGACTGCC
CCCTCCGAGGCGGCTCCTGTGACAAAGGAGGAACCGGAAGATGCCCCAGC
TACAGGGGTTGTTTTCAAAAAGCGCAAGGCTAAGGTTATGAGAAAGTAAC
CCAAGTTTTGGTGCAAGCAATGCAAGATCTTCATTCGCGATACCGCCTTC
GAAAAGTCCCAACATGAGGCTACAGCCAAGCATCAGGGTAATCTAAAGCG
CTTCCTTCGTGACATCCATCGGAACAATGAGCAGCAACAGCGCGAAGCAC
AGAGAGCGAAAAATGAGGTTGAGCGACTTCGCCAGACCGTAGCCGGGTCT
GCGGGTGGAAAAGACGGGGATGCTGCGCCCTGGAAACGTGCGCCCGCCCC
GGCGCCCAAACCTCAGGAGCGACCTGTTTCTCTGGAAGAGAGAAAGCGAC
AAATGGCACAATTAGCGGAGATGGGTATCGCTATTCCGGAAGAATACCGC
AGTGAGATGGCCCTGGCCGGAGAATGGCAGACACTGTCGGAGAAAGTCGT
ACAACCTTCGGAGGAATCAAAAGCCAGTCAATCACTAGGGGTACGCAAAC
GAAAGCATGAAGAGCGGGATGAGGAGGAAGAAGAGGCGAAACAGGAAGCC
GAACGTTTTGTTAGTAAGGGCTGGGGCTCCCGGACACGAGTGTATCCGGG
TGCCCAAGAGGACACTGACCTCGACGCTCTTTTGGAGTCGACGAAAGATA
TTAAAAAGGATGGCGGAGTATTGGAAATCAGCGCTCCTGAGACCGGTGAG
CCGTCTCAAGTCAAACAGGAGAGCGAGACTGCCCCCTCCGAGGCGGCTCC
TGTGACAAAGGAGGAACCGGAAGATGCCCCAGCTACAGGGGTTGTTTTCA
AAAAGCGCAAGGCTAAGGTTATGAGAAAGTAACCCAAGTTTTGGTGCAAG
CAATGCAAGATCTTCATTCGCGATACCGCCTTCGAAAAGTCCCAACATGA
GGCTACAGCCAAGCATCAGGGTAATCTAAAGCGCTTCCTTCGTGACATCC
ATCGGAACAATGAGCAGCAACAGCGCGAAGCACAGAGAGCGAAAAATGAG
GTTGAGCGACTTCGCCAGACCGTAGCCGGGTCTGCGGGTGGAAAAGACGG
GGATGCTGCGCCCTGGAAACGTGCGCCCGCCCCGGCGCCCAAACCTCAGG
AGCGACCTGTTTCTCTGGAAGAGAGAAAGCGACAAATGGCACAATTAGCG
GAGATGGGTATCGCTATTCCGGAAGAATACCGCAGTGAGATGGCCCTGGC
CGGAGAATGGCAGACACTGTCGGAGAAAGTCGTACAACCTTCGGAGGAAT
CAAAAGCCAGTCAATCACTAGGGGTACGCAAACGAAAGCATGAAGAGCGG
GATGAGGAGGAAGAAGAGGCGAAACAGGAAGCCGAACGTTTTGTTAGTAA
GGGCTGGGGCTCCCGGACACGAGTGTATCCGGGTGCCCAAGAGGACACTG
ACCTCGACGCTCTTTTGGAGTCGACGAAAGATATTAAAAAGGATGGCGGA
GTATTGGAAATCAGCGCTCCTGAGACCGGTGAGCCGTCTCAAGTCAAACA
GGAGAGCGAGACTGCCCCCTCCGAGGCGGCTCCTGTGACAAAGGAGGAAC
CGGAAGATGCCCCAGCTACAGGGGTTGTTTTCAAAAAGCGCAAGGCTAAG
GTTATGAGAAAGTAACCCAAGTTTTGGTGCAAGCAATGCAAGATCTTCAT
TCGCGATACCGCCTTCGAAAAGTCCCAACATGAGGCTACAGCCAAGCATC
AGGGTAATCTAAAGCGCTTCCTTCGTGACATCCATCGGAACAATGAGCAG
CAACAGCGCGAAGCACAGAGAGCGAAAAATGAGGTTGAGCGACTTCGCCA
GACCGTAGCCGGGTCTGCGGGTGGAAAAGACGGGGATGCTGCGCCCTGGA
AACGTGCGCCCGCCCCGGCGCCCAAACCTCAGGAGCGACCTGTTTCTCTG
GAAGAGAGAAAGCGACAAATGGCACAATTAGCGGAGATGGGTATCGCTAT
TCCGGAAGAATACCGCAGTGAGATGGCCCTGGCCGGAGAATGGCAGACAC
TGTCGGAGAAAGTCGTACAACCTTCGGAGGAATCAAAAGCCAGTCAATCA
CTAGGGGTACGCAAACGAAAGCATGAAGAGCGGGATGAGGAGGAAGAAGA
GGCGAAACAGGAAGCCGAACGTTTTGTTAGTAAGGGCTGGGGCTCCCGGA
CACGAGTGTATCCGGGTGCCCAAGAGGACACTGACCTCGACGCTCTTTTG
GAGTCGACGAAAGATATTAAAAAGGATGGCGGAGTATTGGAAATCAGCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_39315CAN33_39315Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39315-T1CAN33_39315-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39315-T1.cdsCAN33_39315-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39315-T1.exon3CAN33_39315-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_39315-T1.exon2CAN33_39315-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_39315-T1.exon1CAN33_39315-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000171.5
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013085
DBxrefInterPro:IPR003604
DBxrefPFAM:PF06220
ProductU1 zinc finger family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1964740..1965685 -
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