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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:2030542..2031836- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_39410-T1 ID=CAN33_39410-T1|Name=CAN33_39410-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1295bp|location=Sequence derived from alignment at NKJJ01000017.1:2030542..2031836- (Aspergillus niger FDAARGOS_311)
ATGGCCAACCAGCTGCATAGTGCCCCGCCCTTCCGGGCCGAACATATGGG
TTCCTTGCTCCGTCCCGAGAGCCTGCTTGCCGTGCGCGAGAAGATTCGCG
ATACCGGCATCTCCGAGGAGGCTGCTGGTCTGCACGCCGTTGAGAAAGAG
ACCGTTCGTGATGTGGTCAAGCTCCAGCGGGATCTGGGTTACAAGGCTGT
TACTTCTGGTGAATTTAACCGGACTCGTTTCTGGGGACAGATGTGGGATG
AGTTCGAGGGTATGGTTCATCGTTCTGATCTTATTTCTAGCGCATTGTTG
GGAGCATATCACTTACTGATAAGTCAGGCACAATCCGTCTTCAGGATGCT
GAAGCCTCCATGTTCAGACTCTACCACCCCGACGTGGTTAGTCTGATTGA
GAAGGACCGCAAGGTCATGCCCGGTGACTCGGTGATCGCTGGAACCAAGC
TTTCCTGGAACCCCGAGAAGTCGGTGTCAAACCTACACGAACTGAAGCTG
GTTCAACAGGCCTTGCCTGAGAGTGAATGGCACACCATCAAGCTGACCAT
GATCACTCCCGCCTGGTTCCACATGCGCTACAAGCAGGGTAAGGCTTACA
CTCCCGAGGCCTATGCCAACGACGAGGAGTACTTCCAGGACGTCGCAAAG
GTGTACCAGGCCGAGCTTGACGCCCTGTACAAGGCTGGTCTGAGAAACGT
CCAGTTCGATGACCCGGGCATGGCGTACTTCTGCTCCAAGGCCTTCCGCC
AGGGCTGGGAAGAAGACAAGGATAACATTGGCACCGTTGAGGATCTGCTT
GATGCCTACATCAAGCTTTACAACGACTCTCTGAGCAAGATTCCTGCTGA
CATGCACACGGGTATTCATCTTTGCCGTGGTAACTTCATCGGAGGCAGAC
ACTTCGCGGAGGGATCCTATGACATCATCGCCAAGAAGCTGTTCGAGAAC
CTGAACGTGAACACATTCTACCTTGAGTATGACACCGAGCGTGCAGGTGG
CTTTGAGCCCCTCAAGTTCTTGCCCAAGAACAAGAACGTTGTTGTCGGTG
TCATCAGCACCAAGCTTCGCGAGCTGGAGGACAAGGAGGCGATGAAGGAG
CGGATTTACAAGGCCGCCGACTTCGTCAGCGCCGGTAGTGGTGAGACTCG
TGAGGAGGCCCTGAAGCGTATCTGCGTCAGCCCTCAGTGCGGTTTCAGTA
CTCACGAAAGCGGATACCCCCTCAGTTTGGAGGATGAGAAGAAGAAGCTG
GGTCTGACCAGACAGATCGCCGATGAGATCTGGGGACAGCCCTGA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:2030542..2031836- >CAN33_39410-T1 ID=CAN33_39410-T1|Name=CAN33_39410-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2454bp|location=Sequence derived from alignment at NKJJ01000017.1:2030542..2031836- (Aspergillus niger FDAARGOS_311)
GCACAATCCGTCTTCAGGATGCTGAAGCCTCCATGTTCAGACTCTACCAC
CCCGACGTGGTTAGTCTGATTGAGAAGGACCGCAAGGTCATGCCCGGTGA
CTCGGTGATCGCTGGAACCAAGCTTTCCTGGAACCCCGAGAAGTCGGTGT
CAAACCTACACGAACTGAAGCTGGTTCAACAGGCCTTGCCTGAGAGTGAA
TGGCACACCATCAAGCTGACCATGATCACTCCCGCCTGGTTCCACATGCG
CTACAAGCAGGGTAAGGCTTACACTCCCGAGGCCTATGCCAACGACGAGG
AGTACTTCCAGGACGTCGCAAAGGTGTACCAGGCCGAGCTTGACGCCCTG
TACAAGGCTGGTCTGAGAAACGTCCAGTTCGATGACCCGGGCATGGCGTA
CTTCTGCTCCAAGGCCTTCCGCCAGGGCTGGGAAGAAGACAAGGATAACA
TTGGCACCGTTGAGGATCTGCTTGATGCCTACATCAAGCTTTACAACGAC
TCTCTGAGCAAGATTCCTGCTGACATGCACACGGGTATTCATCTTTGCCG
TGGTAACTTCATCGGAGGCAGACACTTCGCGGAGGGATCCTATGACATCA
TCGCCAAGAAGCTGTTCGAGAACCTGAACGTGAACACATTCTACCTTGAG
TATGACACCGAGCGTGCAGGTGGCTTTGAGCCCCTCAAGTTCTTGCCCAA
GAACAAGAACGTTGTTGTCGGTGTCATCAGCACCAAGCTTCGCGAGCTGG
AGGACAAGGAGGCGATGAAGGAGCGGATTTACAAGGCCGCCGACTTCGTC
AGCGCCGGTAGTGGTGAGACTCGTGAGGAGGCCCTGAAGCGTATCTGCGT
CAGCCCTCAGTGCGGTTTCAGTACTCACGAAAGCGGATACCCCCTCAGTT
TGGAGGATGAGAAGAAGAAGCTGGGTCTGACCAGACAGATCGCCGATGAG
ATCTGGGGACAGCCCTGAATGGCCAACCAGCTGCATAGTGCCCCGCCCTT
CCGGGCCGAACATATGGGTTCCTTGCTCCGTCCCGAGAGCCTGCTTGCCG
TGCGCGAGAAGATTCGCGATACCGGCATCTCCGAGGAGGCTGCTGGTCTG
CACGCCGTTGAGAAAGAGACCGTTCGTGATGTGGTCAAGCTCCAGCGGGA
TCTGGGTTACAAGGCTGTTACTTCTGGTGAATTTAACCGGACTCGTTTCT
GGGGACAGATGTGGGATGAGTTCGAGGGCACAATCCGTCTTCAGGATGCT
GAAGCCTCCATGTTCAGACTCTACCACCCCGACGTGGTTAGTCTGATTGA
GAAGGACCGCAAGGTCATGCCCGGTGACTCGGTGATCGCTGGAACCAAGC
TTTCCTGGAACCCCGAGAAGTCGGTGTCAAACCTACACGAACTGAAGCTG
GTTCAACAGGCCTTGCCTGAGAGTGAATGGCACACCATCAAGCTGACCAT
GATCACTCCCGCCTGGTTCCACATGCGCTACAAGCAGGGTAAGGCTTACA
CTCCCGAGGCCTATGCCAACGACGAGGAGTACTTCCAGGACGTCGCAAAG
GTGTACCAGGCCGAGCTTGACGCCCTGTACAAGGCTGGTCTGAGAAACGT
CCAGTTCGATGACCCGGGCATGGCGTACTTCTGCTCCAAGGCCTTCCGCC
AGGGCTGGGAAGAAGACAAGGATAACATTGGCACCGTTGAGGATCTGCTT
GATGCCTACATCAAGCTTTACAACGACTCTCTGAGCAAGATTCCTGCTGA
CATGCACACGGGTATTCATCTTTGCCGTGGTAACTTCATCGGAGGCAGAC
ACTTCGCGGAGGGATCCTATGACATCATCGCCAAGAAGCTGTTCGAGAAC
CTGAACGTGAACACATTCTACCTTGAGTATGACACCGAGCGTGCAGGTGG
CTTTGAGCCCCTCAAGTTCTTGCCCAAGAACAAGAACGTTGTTGTCGGTG
TCATCAGCACCAAGCTTCGCGAGCTGGAGGACAAGGAGGCGATGAAGGAG
CGGATTTACAAGGCCGCCGACTTCGTCAGCGCCGGTAGTGGTGAGACTCG
TGAGGAGGCCCTGAAGCGTATCTGCGTCAGCCCTCAGTGCGGTTTCAGTA
CTCACGAAAGCGGATACCCCCTCAGTTTGGAGGATGAGAAGAAGAAGCTG
GGTCTGACCAGACAGATCGCCGATGAGATCTGGGGACAGCCCTGAATGGC
CAACCAGCTGCATAGTGCCCCGCCCTTCCGGGCCGAACATATGGGTTCCT
TGCTCCGTCCCGAGAGCCTGCTTGCCGTGCGCGAGAAGATTCGCGATACC
GGCATCTCCGAGGAGGCTGCTGGTCTGCACGCCGTTGAGAAAGAGACCGT
TCGTGATGTGGTCAAGCTCCAGCGGGATCTGGGTTACAAGGCTGTTACTT
CTGGTGAATTTAACCGGACTCGTTTCTGGGGACAGATGTGGGATGAGTTC
GAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009086 | methionine biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000171.6 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR002629 |
| DBxref | InterPro:IPR038071 |
| DBxref | PFAM:PF01717 |
| Product | Cobalamin-independent synthase Catalytic domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:2030542..2031836 - |
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