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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:2069589..2071760- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_39480-T1 ID=CAN33_39480-T1|Name=CAN33_39480-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2172bp|location=Sequence derived from alignment at NKJJ01000017.1:2069589..2071760- (Aspergillus niger FDAARGOS_311)
ATGCGCTGGTCAACGTGTCTTACCAGCGCCCTCCTCGCGTCTACAGCACC
GCTGGCCGCTGCAACCAGACTCATTGAATCAAATGCTTTGAATATCTGCC
AGGATAGCAACAATTTTACTGCCACCTACTTCAGCGTCCGCTTCACGCCC
GAGAATCGTTCCTTGGTTCTGAGTTTCGATGGCGTGGCCGCCATCTCCGG
CAAAGTTACTGCCGATCTCTCGGTCGACGTCTATGGCTACCAGTTGACTG
GTGAGACGTTGGATCCGTGTAAAATGAATATAGAGGGTCTCTGTCCGATG
AGCGCCGGTGCCATTAATGTCCAGAACGCCCCGGTCACAATTCCGGAAGA
TGTGGTGCGCCGGATCCCGGGTCTGTAGTATCCCGCGCATTGATTGTCTA
ATAGTATTAACAATATTCTAGGTATCGCATACACTGTGCCAGACCTTGAT
GCCACCGTTCGGGTTTACATCAACTCCACGGATACCGGCACCAGTATTAC
ATGTCTCGAAGCGACCTTGTCGAATGGAAAAACAGTCTACCAGAAAGGAG
TCGGATGGACGACCGCGGTGATCTCCGGCGTCGGGCTTATCGCTTCAGCT
GTTGCAGCTGGTCTGGGCAACTCGAACACTGCGGCCCATGTCGCCGCTAA
CGTGCTGGCCTTTTTCAGCTTCATGCAATCACAGGCCATGTTTGGGATGA
TCTCGGTCCACATGCCGCCGATCGTGGAAGCATGGACCCAGAACATGCAA
TGGAGCATGGGGATCATCCATGTTAAGTTCTTGGATACCATTTGTACCTG
GTACCAAAGGGCAACTGGCGGTACGCCGTCGACTGTCTTGTCCGAGCTCT
CGACTACGTCTGTTGAAGTTCTGAAACGAAAGCGATCTTTTGATGGCGTC
ACCAATGTGTTCAAACGACAATATGCCCAGTCGGAGACTGCCACTACCGG
CACCACAGTGGTGCGGGGAATCGATCGTGTGGGGTTCAGGGCCGGCATTG
AGGGCACCAATATCTTCCTCACCGGCTTCATCTTCTTCGTCTTTTTCGTC
GCCGTGGTGATGATCATCGTCGCGATGCTCAAGGTGGGAAGCCACTTTCT
GGCGAAGAAAGGGAAGACCAAGACCGACAAGTTTGGCGACTTTCATGTGT
CGAAAGGTATCCTCTATCGGCTCATTTTCATCGGATTTCCGCAGATGTGC
GTCCTTTGTCTGTGGGAATTTACGCAGCATGATTCGGCAGCCGAAGTCGT
TTTGGCGGTGATCATGTTGGTTTCCATGATCTGCACGCTGGGCTGGGCTG
CCTTCCGAGTCATCATTCTCGCACGGAGGTCGGTAGCGATGCATCGCAAC
CCGGCCTATATCCTCTACTCAGACGAGGCATGTCTGAACAAGCTGGGGTT
TTTGTATGTGCATTACCGAGCGACCGCCTACTACTTCCTCGTGTTCGCAC
TACTGTATATCTTCGTCAAGGCGATGTTCATCAGTCTGAGCCAGCCGGCC
CCGGTGGTGCAGACGGTGGCCATGGTGATTATTGAGACCTTGGCGCTTAT
TGGGATCAGTATCGTGCGACCGTGGATGGACAAAAAAACCAATGGCTACA
ATATCGCCATCGCATCCATCAACTTTTTAAATTCCATCTTGTTGCTTTTC
TTTTCCAACGTCTTCGACCAGCCCGGCATCGTGACCGGTGTGATGGGGGT
CATTTTCTTTGTGTACAATGCCGCCTTTGCGCTCATTCTGCTCCTCCTCG
TTCTTTACTCCGCCGTTAACGCTATCTTCTCGAAGAATCCGGACATGCGC
TATCGGCCGATGCGGGACGACCGGGGATCCTTTGCCAAGTCGGGGAGCCA
GTTGATCACGGAGCTGGATGCGCTCGGCACGACTGCTCGGGGTGAGGGCA
CGCCGGAGATGTGGAACAAAGGCAGTTTGATCGACGACACTGGGTCTGTT
GCTAGTGAGGGACTGCATCGAAGTCACCAAGATCTGGCCCGCGACACTGC
TCCTGGTCGTGAGATGTCTGAGACGCCCGTCAGCCAGGCGAATTTGTTTC
CCGTCAGTCGAGGGAGCAGTCCTGTTCATCGAGTAGCGTCCATGAATGCC
GCAGGTGTGCGCCGCAGTCTGTTGAGTGACAGCGATACGGCATCGGCGAC
TCACCCGCATGCAAACCTATAG back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:2069589..2071760- >CAN33_39480-T1 ID=CAN33_39480-T1|Name=CAN33_39480-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4242bp|location=Sequence derived from alignment at NKJJ01000017.1:2069589..2071760- (Aspergillus niger FDAARGOS_311)
GTATCGCATACACTGTGCCAGACCTTGATGCCACCGTTCGGGTTTACATC
AACTCCACGGATACCGGCACCAGTATTACATGTCTCGAAGCGACCTTGTC
GAATGGAAAAACAGTCTACCAGAAAGGAGTCGGATGGACGACCGCGGTGA
TCTCCGGCGTCGGGCTTATCGCTTCAGCTGTTGCAGCTGGTCTGGGCAAC
TCGAACACTGCGGCCCATGTCGCCGCTAACGTGCTGGCCTTTTTCAGCTT
CATGCAATCACAGGCCATGTTTGGGATGATCTCGGTCCACATGCCGCCGA
TCGTGGAAGCATGGACCCAGAACATGCAATGGAGCATGGGGATCATCCAT
GTTAAGTTCTTGGATACCATTTGTACCTGGTACCAAAGGGCAACTGGCGG
TACGCCGTCGACTGTCTTGTCCGAGCTCTCGACTACGTCTGTTGAAGTTC
TGAAACGAAAGCGATCTTTTGATGGCGTCACCAATGTGTTCAAACGACAA
TATGCCCAGTCGGAGACTGCCACTACCGGCACCACAGTGGTGCGGGGAAT
CGATCGTGTGGGGTTCAGGGCCGGCATTGAGGGCACCAATATCTTCCTCA
CCGGCTTCATCTTCTTCGTCTTTTTCGTCGCCGTGGTGATGATCATCGTC
GCGATGCTCAAGGTGGGAAGCCACTTTCTGGCGAAGAAAGGGAAGACCAA
GACCGACAAGTTTGGCGACTTTCATGTGTCGAAAGGTATCCTCTATCGGC
TCATTTTCATCGGATTTCCGCAGATGTGCGTCCTTTGTCTGTGGGAATTT
ACGCAGCATGATTCGGCAGCCGAAGTCGTTTTGGCGGTGATCATGTTGGT
TTCCATGATCTGCACGCTGGGCTGGGCTGCCTTCCGAGTCATCATTCTCG
CACGGAGGTCGGTAGCGATGCATCGCAACCCGGCCTATATCCTCTACTCA
GACGAGGCATGTCTGAACAAGCTGGGGTTTTTGTATGTGCATTACCGAGC
GACCGCCTACTACTTCCTCGTGTTCGCACTACTGTATATCTTCGTCAAGG
CGATGTTCATCAGTCTGAGCCAGCCGGCCCCGGTGGTGCAGACGGTGGCC
ATGGTGATTATTGAGACCTTGGCGCTTATTGGGATCAGTATCGTGCGACC
GTGGATGGACAAAAAAACCAATGGCTACAATATCGCCATCGCATCCATCA
ACTTTTTAAATTCCATCTTGTTGCTTTTCTTTTCCAACGTCTTCGACCAG
CCCGGCATCGTGACCGGTGTGATGGGGGTCATTTTCTTTGTGTACAATGC
CGCCTTTGCGCTCATTCTGCTCCTCCTCGTTCTTTACTCCGCCGTTAACG
CTATCTTCTCGAAGAATCCGGACATGCGCTATCGGCCGATGCGGGACGAC
CGGGGATCCTTTGCCAAGTCGGGGAGCCAGTTGATCACGGAGCTGGATGC
GCTCGGCACGACTGCTCGGGGTGAGGGCACGCCGGAGATGTGGAACAAAG
GCAGTTTGATCGACGACACTGGGTCTGTTGCTAGTGAGGGACTGCATCGA
AGTCACCAAGATCTGGCCCGCGACACTGCTCCTGGTCGTGAGATGTCTGA
GACGCCCGTCAGCCAGGCGAATTTGTTTCCCGTCAGTCGAGGGAGCAGTC
CTGTTCATCGAGTAGCGTCCATGAATGCCGCAGGTGTGCGCCGCAGTCTG
TTGAGTGACAGCGATACGGCATCGGCGACTCACCCGCATGCAAACCTATA
GATGCGCTGGTCAACGTGTCTTACCAGCGCCCTCCTCGCGTCTACAGCAC
CGCTGGCCGCTGCAACCAGACTCATTGAATCAAATGCTTTGAATATCTGC
CAGGATAGCAACAATTTTACTGCCACCTACTTCAGCGTCCGCTTCACGCC
CGAGAATCGTTCCTTGGTTCTGAGTTTCGATGGCGTGGCCGCCATCTCCG
GCAAAGTTACTGCCGATCTCTCGGTCGACGTCTATGGCTACCAGTTGACT
GGTGAGACGTTGGATCCGTGTAAAATGAATATAGAGGGTCTCTGTCCGAT
GAGCGCCGGTGCCATTAATGTCCAGAACGCCCCGGTCACAATTCCGGAAG
ATGTGGTGCGCCGGATCCCGGGTATCGCATACACTGTGCCAGACCTTGAT
GCCACCGTTCGGGTTTACATCAACTCCACGGATACCGGCACCAGTATTAC
ATGTCTCGAAGCGACCTTGTCGAATGGAAAAACAGTCTACCAGAAAGGAG
TCGGATGGACGACCGCGGTGATCTCCGGCGTCGGGCTTATCGCTTCAGCT
GTTGCAGCTGGTCTGGGCAACTCGAACACTGCGGCCCATGTCGCCGCTAA
CGTGCTGGCCTTTTTCAGCTTCATGCAATCACAGGCCATGTTTGGGATGA
TCTCGGTCCACATGCCGCCGATCGTGGAAGCATGGACCCAGAACATGCAA
TGGAGCATGGGGATCATCCATGTTAAGTTCTTGGATACCATTTGTACCTG
GTACCAAAGGGCAACTGGCGGTACGCCGTCGACTGTCTTGTCCGAGCTCT
CGACTACGTCTGTTGAAGTTCTGAAACGAAAGCGATCTTTTGATGGCGTC
ACCAATGTGTTCAAACGACAATATGCCCAGTCGGAGACTGCCACTACCGG
CACCACAGTGGTGCGGGGAATCGATCGTGTGGGGTTCAGGGCCGGCATTG
AGGGCACCAATATCTTCCTCACCGGCTTCATCTTCTTCGTCTTTTTCGTC
GCCGTGGTGATGATCATCGTCGCGATGCTCAAGGTGGGAAGCCACTTTCT
GGCGAAGAAAGGGAAGACCAAGACCGACAAGTTTGGCGACTTTCATGTGT
CGAAAGGTATCCTCTATCGGCTCATTTTCATCGGATTTCCGCAGATGTGC
GTCCTTTGTCTGTGGGAATTTACGCAGCATGATTCGGCAGCCGAAGTCGT
TTTGGCGGTGATCATGTTGGTTTCCATGATCTGCACGCTGGGCTGGGCTG
CCTTCCGAGTCATCATTCTCGCACGGAGGTCGGTAGCGATGCATCGCAAC
CCGGCCTATATCCTCTACTCAGACGAGGCATGTCTGAACAAGCTGGGGTT
TTTGTATGTGCATTACCGAGCGACCGCCTACTACTTCCTCGTGTTCGCAC
TACTGTATATCTTCGTCAAGGCGATGTTCATCAGTCTGAGCCAGCCGGCC
CCGGTGGTGCAGACGGTGGCCATGGTGATTATTGAGACCTTGGCGCTTAT
TGGGATCAGTATCGTGCGACCGTGGATGGACAAAAAAACCAATGGCTACA
ATATCGCCATCGCATCCATCAACTTTTTAAATTCCATCTTGTTGCTTTTC
TTTTCCAACGTCTTCGACCAGCCCGGCATCGTGACCGGTGTGATGGGGGT
CATTTTCTTTGTGTACAATGCCGCCTTTGCGCTCATTCTGCTCCTCCTCG
TTCTTTACTCCGCCGTTAACGCTATCTTCTCGAAGAATCCGGACATGCGC
TATCGGCCGATGCGGGACGACCGGGGATCCTTTGCCAAGTCGGGGAGCCA
GTTGATCACGGAGCTGGATGCGCTCGGCACGACTGCTCGGGGTGAGGGCA
CGCCGGAGATGTGGAACAAAGGCAGTTTGATCGACGACACTGGGTCTGTT
GCTAGTGAGGGACTGCATCGAAGTCACCAAGATCTGGCCCGCGACACTGC
TCCTGGTCGTGAGATGTCTGAGACGCCCGTCAGCCAGGCGAATTTGTTTC
CCGTCAGTCGAGGGAGCAGTCCTGTTCATCGAGTAGCGTCCATGAATGCC
GCAGGTGTGCGCCGCAGTCTGTTGAGTGACAGCGATACGGCATCGGCGAC
TCACCCGCATGCAAACCTATAGATGCGCTGGTCAACGTGTCTTACCAGCG
CCCTCCTCGCGTCTACAGCACCGCTGGCCGCTGCAACCAGACTCATTGAA
TCAAATGCTTTGAATATCTGCCAGGATAGCAACAATTTTACTGCCACCTA
CTTCAGCGTCCGCTTCACGCCCGAGAATCGTTCCTTGGTTCTGAGTTTCG
ATGGCGTGGCCGCCATCTCCGGCAAAGTTACTGCCGATCTCTCGGTCGAC
GTCTATGGCTACCAGTTGACTGGTGAGACGTTGGATCCGTGTAAAATGAA
TATAGAGGGTCTCTGTCCGATGAGCGCCGGTGCCATTAATGTCCAGAACG
CCCCGGTCACAATTCCGGAAGATGTGGTGCGCCGGATCCCGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | SECRETED:SignalP(1-21) |
| DBxref | InterPro:IPR010308 |
| DBxref | InterPro:IPR032800 |
| DBxref | PFAM:PF14558 |
| DBxref | PFAM:PF06011 |
| Product | Transient receptor potential (TRP) ion channel family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:2069589..2071760 - |
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