|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:2088119..2089629- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_39515-T1 ID=CAN33_39515-T1|Name=CAN33_39515-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1511bp|location=Sequence derived from alignment at NKJJ01000017.1:2088119..2089629- (Aspergillus niger FDAARGOS_311)
ATGGTGGTGCCAGGCTGGATATGGGCGGTCTTTCTGACCATATTTGTCTC
CTTTCAGAGAACAGTGACGGCGCTGCAGCTGGACATTAACGATGAACGTA
AGTGTTCTCGACTCGTGCAGGAATGACGCACACAGGTGCAGGTACTGATC
ATTGCGCAAATATAGAATCTATCAAAGATGCCGCCAGGACCACGGCCTTC
AACATGATGAGCTACTATCATGGCAACGAATCGGGCCAAACGCCAGGAAA
GCTGCCCGATACCTGGTGGGAAGGTGGTGCTATGTTCATGACGTTGATTC
AGTACTGGTACTGGACTGGCGACACATCCTATAACGAGGTGACCACCCAG
GGTATGCTCTGGCAGAAGGGCGACAACGACTACTTTCCAGCCAACGATAG
TAACTATCTCGGGAACGACGACCAGGTCTTCTGGGGTCTAGCCGCCATGA
CGGCTGCAGAACTAAACTATCCCGAACAAGATGGTCAGCCATCGTGGCTG
TCGCTCGCCCAAGGTGTCTTCAACACCCAGGTCCCCGATGGGATACGACC
AGCTGCCAGGGTGGACTTCGTTGGCAGATTTGGCCTTACCAGGCTGGTTA
TACCACCAAGAACGCCATCTCGAACGGAGGTCTGTTTCAATTAGCCGCTC
GTCTGGGACGCTACACCAACAACGATACATACACCGACTGGGCAGAAAAG
ATTTGGGACTGGAGTGCGACAACGCCGCTGTTGCAGACGGAGGACTGGTA
CATTGCCGACACAACCACCACAGAGGCAAACTGCAAGGATCATGGTGATA
TACAGTGGACGTATAATTATGGAACCTACCTCAGCGGGGCCGCATACATG
TACAATCTGGTCAGCACCTATTCCTCCAATCTGCAAATTTAATCCCTGGC
TAATCAGATTCTAGACCAATGGCGCCGACAAATGGAAGAAAGGTCTCGAC
GGTCTGCTTGCAAGTACCTTCTCAAGGTTCTTCCCGAAGGAATACGGCAG
CAACATTATGTCCGAGATCTCCTGTGAGCCCAACATGATGTGCGACCGGA
ATCAGGACTGCTTCAAAGGTTTCTTGTCCTCCTGGCTTACCTTTACTACA
ACCATTGCGCCCTACACTGCCGATCAGATCCTCCCGAAGATCCAGCAATC
CGCCCTAGCAGCGGCAAAGCAATGCTCGGGAGGCGATTCCGGCACTCAGT
GCGGGCGGCGGTGGTACCAAGCGCAGTGGGATGGCGAGACATCGCTCGAA
AGTGATATGAGTGCCCTGAGTGTCTTCTCGTCGAATATGATCACGCATCG
GCAAAGTCAAGGTGGCCAATCTCAGGGTCCGTTGACGTCGGACACTGGCG
GCACCAGCCAAAGCAACCCTAATGCAGGAACCGGTCCAAAGGATGCACCC
AATAAGCTGCCCGACATCACAACCGGAGACCGTGCAGGTGCCTCCATCCT
TACTGTCCTCTTTGTCGGCAGCTGGGCTGGTGCTATTACCTGGCTGGTCT
ATGGAGGTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:2088119..2089629- >CAN33_39515-T1 ID=CAN33_39515-T1|Name=CAN33_39515-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5304bp|location=Sequence derived from alignment at NKJJ01000017.1:2088119..2089629- (Aspergillus niger FDAARGOS_311)
ACCAATGGCGCCGACAAATGGAAGAAAGGTCTCGACGGTCTGCTTGCAAG
TACCTTCTCAAGGTTCTTCCCGAAGGAATACGGCAGCAACATTATGTCCG
AGATCTCCTGTGAGCCCAACATGATGTGCGACCGGAATCAGGACTGCTTC
AAAGGTTTCTTGTCCTCCTGGCTTACCTTTACTACAACCATTGCGCCCTA
CACTGCCGATCAGATCCTCCCGAAGATCCAGCAATCCGCCCTAGCAGCGG
CAAAGCAATGCTCGGGAGGCGATTCCGGCACTCAGTGCGGGCGGCGGTGG
TACCAAGCGCAGTGGGATGGCGAGACATCGCTCGAAAGTGATATGAGTGC
CCTGAGTGTCTTCTCGTCGAATATGATCACGCATCGGCAAAGTCAAGGTG
GCCAATCTCAGGGTCCGTTGACGTCGGACACTGGCGGCACCAGCCAAAGC
AACCCTAATGCAGGAACCGGTCCAAAGGATGCACCCAATAAGCTGCCCGA
CATCACAACCGGAGACCGTGCAGGTGCCTCCATCCTTACTGTCCTCTTTG
TCGGCAGCTGGGCTGGTGCTATTACCTGGCTGGTCTATGGAGGTTGAGCT
GGTTATACCACCAAGAACGCCATCTCGAACGGAGGTCTGTTTCAATTAGC
CGCTCGTCTGGGACGCTACACCAACAACGATACATACACCGACTGGGCAG
AAAAGATTTGGGACTGGAGTGCGACAACGCCGCTGTTGCAGACGGAGGAC
TGGTACATTGCCGACACAACCACCACAGAGGCAAACTGCAAGGATCATGG
TGATATACAGTGGACGTATAATTATGGAACCTACCTCAGCGGGGCCGCAT
ACATGTACAATCTGAATCTATCAAAGATGCCGCCAGGACCACGGCCTTCA
ACATGATGAGCTACTATCATGGCAACGAATCGGGCCAAACGCCAGGAAAG
CTGCCCGATACCTGGTGGGAAGGTGGTGCTATGTTCATGACGTTGATTCA
GTACTGGTACTGGACTGGCGACACATCCTATAACGAGGTGACCACCCAGG
GTATGCTCTGGCAGAAGGGCGACAACGACTACTTTCCAGCCAACGATAGT
AACTATCTCGGGAACGACGACCAGGTCTTCTGGGGTCTAGCCGCCATGAC
GGCTGCAGAACTAAACTATCCCGAACAAGATGGTCAGCCATCGTGGCTGT
CGCTCGCCCAAGGTGTCTTCAACACCCAGATGGTGGTGCCAGGCTGGATA
TGGGCGGTCTTTCTGACCATATTTGTCTCCTTTCAGAGAACAGTGACGGC
GCTGCAGCTGGACATTAACGATGAACACCAATGGCGCCGACAAATGGAAG
AAAGGTCTCGACGGTCTGCTTGCAAGTACCTTCTCAAGGTTCTTCCCGAA
GGAATACGGCAGCAACATTATGTCCGAGATCTCCTGTGAGCCCAACATGA
TGTGCGACCGGAATCAGGACTGCTTCAAAGGTTTCTTGTCCTCCTGGCTT
ACCTTTACTACAACCATTGCGCCCTACACTGCCGATCAGATCCTCCCGAA
GATCCAGCAATCCGCCCTAGCAGCGGCAAAGCAATGCTCGGGAGGCGATT
CCGGCACTCAGTGCGGGCGGCGGTGGTACCAAGCGCAGTGGGATGGCGAG
ACATCGCTCGAAAGTGATATGAGTGCCCTGAGTGTCTTCTCGTCGAATAT
GATCACGCATCGGCAAAGTCAAGGTGGCCAATCTCAGGGTCCGTTGACGT
CGGACACTGGCGGCACCAGCCAAAGCAACCCTAATGCAGGAACCGGTCCA
AAGGATGCACCCAATAAGCTGCCCGACATCACAACCGGAGACCGTGCAGG
TGCCTCCATCCTTACTGTCCTCTTTGTCGGCAGCTGGGCTGGTGCTATTA
CCTGGCTGGTCTATGGAGGTTGAGCTGGTTATACCACCAAGAACGCCATC
TCGAACGGAGGTCTGTTTCAATTAGCCGCTCGTCTGGGACGCTACACCAA
CAACGATACATACACCGACTGGGCAGAAAAGATTTGGGACTGGAGTGCGA
CAACGCCGCTGTTGCAGACGGAGGACTGGTACATTGCCGACACAACCACC
ACAGAGGCAAACTGCAAGGATCATGGTGATATACAGTGGACGTATAATTA
TGGAACCTACCTCAGCGGGGCCGCATACATGTACAATCTGAATCTATCAA
AGATGCCGCCAGGACCACGGCCTTCAACATGATGAGCTACTATCATGGCA
ACGAATCGGGCCAAACGCCAGGAAAGCTGCCCGATACCTGGTGGGAAGGT
GGTGCTATGTTCATGACGTTGATTCAGTACTGGTACTGGACTGGCGACAC
ATCCTATAACGAGGTGACCACCCAGGGTATGCTCTGGCAGAAGGGCGACA
ACGACTACTTTCCAGCCAACGATAGTAACTATCTCGGGAACGACGACCAG
GTCTTCTGGGGTCTAGCCGCCATGACGGCTGCAGAACTAAACTATCCCGA
ACAAGATGGTCAGCCATCGTGGCTGTCGCTCGCCCAAGGTGTCTTCAACA
CCCAGATGGTGGTGCCAGGCTGGATATGGGCGGTCTTTCTGACCATATTT
GTCTCCTTTCAGAGAACAGTGACGGCGCTGCAGCTGGACATTAACGATGA
ACACCAATGGCGCCGACAAATGGAAGAAAGGTCTCGACGGTCTGCTTGCA
AGTACCTTCTCAAGGTTCTTCCCGAAGGAATACGGCAGCAACATTATGTC
CGAGATCTCCTGTGAGCCCAACATGATGTGCGACCGGAATCAGGACTGCT
TCAAAGGTTTCTTGTCCTCCTGGCTTACCTTTACTACAACCATTGCGCCC
TACACTGCCGATCAGATCCTCCCGAAGATCCAGCAATCCGCCCTAGCAGC
GGCAAAGCAATGCTCGGGAGGCGATTCCGGCACTCAGTGCGGGCGGCGGT
GGTACCAAGCGCAGTGGGATGGCGAGACATCGCTCGAAAGTGATATGAGT
GCCCTGAGTGTCTTCTCGTCGAATATGATCACGCATCGGCAAAGTCAAGG
TGGCCAATCTCAGGGTCCGTTGACGTCGGACACTGGCGGCACCAGCCAAA
GCAACCCTAATGCAGGAACCGGTCCAAAGGATGCACCCAATAAGCTGCCC
GACATCACAACCGGAGACCGTGCAGGTGCCTCCATCCTTACTGTCCTCTT
TGTCGGCAGCTGGGCTGGTGCTATTACCTGGCTGGTCTATGGAGGTTGAG
CTGGTTATACCACCAAGAACGCCATCTCGAACGGAGGTCTGTTTCAATTA
GCCGCTCGTCTGGGACGCTACACCAACAACGATACATACACCGACTGGGC
AGAAAAGATTTGGGACTGGAGTGCGACAACGCCGCTGTTGCAGACGGAGG
ACTGGTACATTGCCGACACAACCACCACAGAGGCAAACTGCAAGGATCAT
GGTGATATACAGTGGACGTATAATTATGGAACCTACCTCAGCGGGGCCGC
ATACATGTACAATCTGAATCTATCAAAGATGCCGCCAGGACCACGGCCTT
CAACATGATGAGCTACTATCATGGCAACGAATCGGGCCAAACGCCAGGAA
AGCTGCCCGATACCTGGTGGGAAGGTGGTGCTATGTTCATGACGTTGATT
CAGTACTGGTACTGGACTGGCGACACATCCTATAACGAGGTGACCACCCA
GGGTATGCTCTGGCAGAAGGGCGACAACGACTACTTTCCAGCCAACGATA
GTAACTATCTCGGGAACGACGACCAGGTCTTCTGGGGTCTAGCCGCCATG
ACGGCTGCAGAACTAAACTATCCCGAACAAGATGGTCAGCCATCGTGGCT
GTCGCTCGCCCAAGGTGTCTTCAACACCCAGATGGTGGTGCCAGGCTGGA
TATGGGCGGTCTTTCTGACCATATTTGTCTCCTTTCAGAGAACAGTGACG
GCGCTGCAGCTGGACATTAACGATGAACACCAATGGCGCCGACAAATGGA
AGAAAGGTCTCGACGGTCTGCTTGCAAGTACCTTCTCAAGGTTCTTCCCG
AAGGAATACGGCAGCAACATTATGTCCGAGATCTCCTGTGAGCCCAACAT
GATGTGCGACCGGAATCAGGACTGCTTCAAAGGTTTCTTGTCCTCCTGGC
TTACCTTTACTACAACCATTGCGCCCTACACTGCCGATCAGATCCTCCCG
AAGATCCAGCAATCCGCCCTAGCAGCGGCAAAGCAATGCTCGGGAGGCGA
TTCCGGCACTCAGTGCGGGCGGCGGTGGTACCAAGCGCAGTGGGATGGCG
AGACATCGCTCGAAAGTGATATGAGTGCCCTGAGTGTCTTCTCGTCGAAT
ATGATCACGCATCGGCAAAGTCAAGGTGGCCAATCTCAGGGTCCGTTGAC
GTCGGACACTGGCGGCACCAGCCAAAGCAACCCTAATGCAGGAACCGGTC
CAAAGGATGCACCCAATAAGCTGCCCGACATCACAACCGGAGACCGTGCA
GGTGCCTCCATCCTTACTGTCCTCTTTGTCGGCAGCTGGGCTGGTGCTAT
TACCTGGCTGGTCTATGGAGGTTGAGCTGGTTATACCACCAAGAACGCCA
TCTCGAACGGAGGTCTGTTTCAATTAGCCGCTCGTCTGGGACGCTACACC
AACAACGATACATACACCGACTGGGCAGAAAAGATTTGGGACTGGAGTGC
GACAACGCCGCTGTTGCAGACGGAGGACTGGTACATTGCCGACACAACCA
CCACAGAGGCAAACTGCAAGGATCATGGTGATATACAGTGGACGTATAAT
TATGGAACCTACCTCAGCGGGGCCGCATACATGTACAATCTGAATCTATC
AAAGATGCCGCCAGGACCACGGCCTTCAACATGATGAGCTACTATCATGG
CAACGAATCGGGCCAAACGCCAGGAAAGCTGCCCGATACCTGGTGGGAAG
GTGGTGCTATGTTCATGACGTTGATTCAGTACTGGTACTGGACTGGCGAC
ACATCCTATAACGAGGTGACCACCCAGGGTATGCTCTGGCAGAAGGGCGA
CAACGACTACTTTCCAGCCAACGATAGTAACTATCTCGGGAACGACGACC
AGGTCTTCTGGGGTCTAGCCGCCATGACGGCTGCAGAACTAAACTATCCC
GAACAAGATGGTCAGCCATCGTGGCTGTCGCTCGCCCAAGGTGTCTTCAA
CACCCAGATGGTGGTGCCAGGCTGGATATGGGCGGTCTTTCTGACCATAT
TTGTCTCCTTTCAGAGAACAGTGACGGCGCTGCAGCTGGACATTAACGAT
GAAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016052 | carbohydrate catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0008496 | mannan endo-1,6-alpha-mannosidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-24) |
| Note | CAZy:GH76 |
| DBxref | InterPro:IPR008928 |
| DBxref | InterPro:IPR014480 |
| DBxref | InterPro:IPR005198 |
| DBxref | PFAM:PF03663 |
| Product | Glycosyl hydrolase family 76 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:2088119..2089629 - |
|
