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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:2116180..2116994+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_39570-T1 ID=CAN33_39570-T1|Name=CAN33_39570-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=815bp|location=Sequence derived from alignment at NKJJ01000017.1:2116180..2116994+ (Aspergillus niger FDAARGOS_311)
ATGCTGAGCGGACGCCTCACCTCCAAGACGCTGGGCCCCTTCGCCCACCC
CAGCAGCTGCACCAACCCGTTGTATCAAGCGCTCTCTCAGACCCGGACCG
CAAGCACCTCCTCCATGCGAGTCCGCAGCACACAGACCCTGAAGCCCACC
ACAGCTCTGCGTCCCTCGACGACGACAACGCAGCTCCCGAGCTCTCTGGT
TCTCTGCCGCGCCAACTCCTCTGCCGCCGCCGCTGCCAAGAGCGAAACCG
TCCGTCTCGACTGGGACTCGTTCTTCAAGCTCCGCGCTAGCCGCCGCCGG
TACTCGCTCGCCTCGTCGATCGTGAGCTCCCTGTTCACCACGGTCATTGG
TGTGCAGGTTCTCTCGACGCAGGATCTGGAGTCCCTCGGGGCGCAGGTCA
TGGGTCTTGATCCGTTTGTGGTGCTGGGTATGGCAACGGCGGCGTGCGGT
GCGGCGGGTTGGCTTGTCGGTCCGTTTGTGGGGAATGCTGTTTGGGGGTT
GGTTTATCGCAGATATAAGCCTGCTGTTATGGTGGTAAGCTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTCCCCTTTTCCCTTAATTAAGTTGCTGTTGA
GAAGAAACGTGGATACTGATAGTGGGTTGTGTGTGTAGAAAGAGAAGGAA
TTCTTCGACCGCATTAGACGCTTCCGTGTCGACCCCTCGTCCAACTCCAT
TGCTAACCCCGTTCCTGATTACTATGGTGAGAAGATCGGCAGTGTGCAGG
GTTATCGCCAGTGGTTGAAGGATCAGCGGGCGTATAACCGCAAGAGACGT
CATTTCATCGTTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:2116180..2116994+ >CAN33_39570-T1 ID=CAN33_39570-T1|Name=CAN33_39570-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1422bp|location=Sequence derived from alignment at NKJJ01000017.1:2116180..2116994+ (Aspergillus niger FDAARGOS_311)
ATGCTGAGCGGACGCCTCACCTCCAAGACGCTGGGCCCCTTCGCCCACCC
CAGCAGCTGCACCAACCCGTTGTATCAAGCGCTCTCTCAGACCCGGACCG
CAAGCACCTCCTCCATGCGAGTCCGCAGCACACAGACCCTGAAGCCCACC
ACAGCTCTGCGTCCCTCGACGACGACAACGCAGCTCCCGAGCTCTCTGGT
TCTCTGCCGCGCCAACTCCTCTGCCGCCGCCGCTGCCAAGAGCGAAACCG
TCCGTCTCGACTGGGACTCGTTCTTCAAGCTCCGCGCTAGCCGCCGCCGG
TACTCGCTCGCCTCGTCGATCGTGAGCTCCCTGTTCACCACGGTCATTGG
TGTGCAGGTTCTCTCGACGCAGGATCTGGAGTCCCTCGGGGCGCAGGTCA
TGGGTCTTGATCCGTTTGTGGTGCTGGGTATGGCAACGGCGGCGTGCGGT
GCGGCGGGTTGGCTTGTCGGTCCGTTTGTGGGGAATGCTGTTTGGGGGTT
GGTTTATCGCAGATATAAGCCTGCTGTTATGGTGAAAGAGAAGGAATTCT
TCGACCGCATTAGACGCTTCCGTGTCGACCCCTCGTCCAACTCCATTGCT
AACCCCGTTCCTGATTACTATGGTGAGAAGATCGGCAGTGTGCAGGGTTA
TCGCCAGTGGTTGAAGGATCAGCGGGCGTATAACCGCAAGAGACGTCATT
TCATCGTTTAGATGCTGAGCGGACGCCTCACCTCCAAGACGCTGGGCCCC
TTCGCCCACCCCAGCAGCTGCACCAACCCGTTGTATCAAGCGCTCTCTCA
GACCCGGACCGCAAGCACCTCCTCCATGCGAGTCCGCAGCACACAGACCC
TGAAGCCCACCACAGCTCTGCGTCCCTCGACGACGACAACGCAGCTCCCG
AGCTCTCTGGTTCTCTGCCGCGCCAACTCCTCTGCCGCCGCCGCTGCCAA
GAGCGAAACCGTCCGTCTCGACTGGGACTCGTTCTTCAAGCTCCGCGCTA
GCCGCCGCCGGTACTCGCTCGCCTCGTCGATCGTGAGCTCCCTGTTCACC
ACGGTCATTGGTGTGCAGGTTCTCTCGACGCAGGATCTGGAGTCCCTCGG
GGCGCAGGTCATGGGTCTTGATCCGTTTGTGGTGCTGGGTATGGCAACGG
CGGCGTGCGGTGCGGCGGGTTGGCTTGTCGGTCCGTTTGTGGGGAATGCT
GTTTGGGGGTTGGTTTATCGCAGATATAAGCCTGCTGTTATGGTGAAAGA
GAAGGAATTCTTCGACCGCATTAGACGCTTCCGTGTCGACCCCTCGTCCA
ACTCCATTGCTAACCCCGTTCCTGATTACTATGGTGAGAAGATCGGCAGT
GTGCAGGGTTATCGCCAGTGGTTGAAGGATCAGCGGGCGTATAACCGCAA
GAGACGTCATTTCATCGTTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0001405 | PAM complex, Tim23 associated import motor |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264HN5 |
| DBxref | InterPro:IPR013875 |
| DBxref | PFAM:PF08566 |
| Product | TIM23 complex component |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:2116180..2116994 + |
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