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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:2141829..2143502- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_39610-T1 ID=CAN33_39610-T1|Name=CAN33_39610-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1674bp|location=Sequence derived from alignment at NKJJ01000017.1:2141829..2143502- (Aspergillus niger FDAARGOS_311)
ATGGCGACTCTTCTACCTCCCCCGTCGAAGCGTCAGAGGACAGAGAATGC
TGAGCGGGCCCGCCTGCAGCAGGAGATCCAGAGTGTTCCAGAGAACCTGG
GTAGCATTCGTGTGCAATTCTTCGACCAGGCGACGGGATCTGCGACCGGG
CCGGCGGTGTCCGTTCCAGTTGCTGATGCCAGTGTGAAGAATCTCGAGAC
TCTTTTGAATACGTTACAAGGCAATGTAGGTATGCAGCAAGGCATTGTTC
AGCATATACCAGAGACTAATAGATTTCTTTTTGCGCCGCAGGAAGAAGAT
GAGCGAGTACCGTACCGGTTCACATACCAATCCGATGGCAAAGACAAAAA
CGACCAGACAATCGATATCCTCTCTGACTTGTACCACTCCCTCTTGAAGC
CCGGCCTGAAGACAACCGAAGATACTGTACATCTCTACTTCACTCCCCAG
GCTGTGTTCCGCGTCAAAGCCGTTTCACGATGCTCCGCTGCGATCGCTGG
ACACGGCGAGGCAATTCTTGCGACCAGCTTCTCCCCTGTTAACTCGTCCA
CAATGGTTACCGGCAGCGGTGACTCTACAGCTCGCATCTGGGATTGCGAC
ACTGGAACTCCTCTGCACACTCTGAAGGGCCATACCAGCTGGGTGCTGGC
GGTCAGCTACTCGCCCAACGGCGCAATGATTGCGACGGGAAGCATGGACA
ATACCGTGCGCTTCTGGGACGCAAAGAAGGGAACCCCGTTGGGCGCGCCC
TTGAAGGGACACGCCAAATGGATCACCAGTCTGGCCTGGGAACCATACCA
TCTTCAGCAGCCCGGCCGGCCGCGCCTGGCGTCCGCGTCCAAGGACTCGA
CAGTCCGCATATGGGACGTGGTCTCGAAACGCATCGACACCGTTCTCACC
GGGCACAAGGGCTCCGTGACCTGCGTCCGCTGGGGCGGAACCGGGAACAT
CTACACTGCTTCTCACGACAAGACCATCAAGGTATGGAATGCTCAGAACG
GTACCCTGATCCAGACCCTTTCTGCGCACGCCCACCGCGTCAACCACCTG
GCCCTGTCTACCGACTTTGTCCTCCGCACTGCGTACCACGACCACACCGG
CAAGGTGCCGCAGGCCGATGCCGAGAAGGTCGCGGCAGCCAAGCAGCGAT
TCGAGCAGGCGGCGACCATCAACAATAAGATCGTCGAGAAGCTTGTGTCA
GCGAGTGACGACTTCACCATGTACTTGTGGGAGCCGGTTAATTCGAGTAA
GCCAATTGCGCGACTGCTGGGACACCAGAAGGAGGTGAACCATGTGACGT
TCTCGCCGGACATGGCGTACATTGCGTCCGCGGGATTCGACAACCATGTT
AAGCTGTGGAACGCCCGTGACGGGAAGTGAGTTTTTACCACAGCTTCAAA
ATGTGACATACAAGTACTAATGGACAATAGGTTTATCACGACACTCCGCG
GCCACGTCGGCGCCGTGTATCAGTGCTGCTTCTCGGCTGATTCCCGGCTG
CTGGTCTCGTCGTCCAAGGACACAACGCTGAAGGTATGGAATGTGCGGAC
GGGCAAGTTGCAAGAGGATCTGCCGGGCCACAAGGACGAGGTGTTTGCAG
TAGATTGGAGTCCGGATGGACAGAAGGTGGGAAGTGGCGGGAAAGACAAG
GCGGTGCGGATATGGAGGAATTAG back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:2141829..2143502- >CAN33_39610-T1 ID=CAN33_39610-T1|Name=CAN33_39610-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4662bp|location=Sequence derived from alignment at NKJJ01000017.1:2141829..2143502- (Aspergillus niger FDAARGOS_311)
GTTTATCACGACACTCCGCGGCCACGTCGGCGCCGTGTATCAGTGCTGCT
TCTCGGCTGATTCCCGGCTGCTGGTCTCGTCGTCCAAGGACACAACGCTG
AAGGTATGGAATGTGCGGACGGGCAAGTTGCAAGAGGATCTGCCGGGCCA
CAAGGACGAGGTGTTTGCAGTAGATTGGAGTCCGGATGGACAGAAGGTGG
GAAGTGGCGGGAAAGACAAGGCGGTGCGGATATGGAGGAATTAGGAAGAA
GATGAGCGAGTACCGTACCGGTTCACATACCAATCCGATGGCAAAGACAA
AAACGACCAGACAATCGATATCCTCTCTGACTTGTACCACTCCCTCTTGA
AGCCCGGCCTGAAGACAACCGAAGATACTGTACATCTCTACTTCACTCCC
CAGGCTGTGTTCCGCGTCAAAGCCGTTTCACGATGCTCCGCTGCGATCGC
TGGACACGGCGAGGCAATTCTTGCGACCAGCTTCTCCCCTGTTAACTCGT
CCACAATGGTTACCGGCAGCGGTGACTCTACAGCTCGCATCTGGGATTGC
GACACTGGAACTCCTCTGCACACTCTGAAGGGCCATACCAGCTGGGTGCT
GGCGGTCAGCTACTCGCCCAACGGCGCAATGATTGCGACGGGAAGCATGG
ACAATACCGTGCGCTTCTGGGACGCAAAGAAGGGAACCCCGTTGGGCGCG
CCCTTGAAGGGACACGCCAAATGGATCACCAGTCTGGCCTGGGAACCATA
CCATCTTCAGCAGCCCGGCCGGCCGCGCCTGGCGTCCGCGTCCAAGGACT
CGACAGTCCGCATATGGGACGTGGTCTCGAAACGCATCGACACCGTTCTC
ACCGGGCACAAGGGCTCCGTGACCTGCGTCCGCTGGGGCGGAACCGGGAA
CATCTACACTGCTTCTCACGACAAGACCATCAAGGTATGGAATGCTCAGA
ACGGTACCCTGATCCAGACCCTTTCTGCGCACGCCCACCGCGTCAACCAC
CTGGCCCTGTCTACCGACTTTGTCCTCCGCACTGCGTACCACGACCACAC
CGGCAAGGTGCCGCAGGCCGATGCCGAGAAGGTCGCGGCAGCCAAGCAGC
GATTCGAGCAGGCGGCGACCATCAACAATAAGATCGTCGAGAAGCTTGTG
TCAGCGAGTGACGACTTCACCATGTACTTGTGGGAGCCGGTTAATTCGAG
TAAGCCAATTGCGCGACTGCTGGGACACCAGAAGGAGGTGAACCATGTGA
CGTTCTCGCCGGACATGGCGTACATTGCGTCCGCGGGATTCGACAACCAT
GTTAAGCTGTGGAACGCCCGTGACGGGAAATGGCGACTCTTCTACCTCCC
CCGTCGAAGCGTCAGAGGACAGAGAATGCTGAGCGGGCCCGCCTGCAGCA
GGAGATCCAGAGTGTTCCAGAGAACCTGGGTAGCATTCGTGTGCAATTCT
TCGACCAGGCGACGGGATCTGCGACCGGGCCGGCGGTGTCCGTTCCAGTT
GCTGATGCCAGTGTGAAGAATCTCGAGACTCTTTTGAATACGTTACAAGG
CAATGTTTATCACGACACTCCGCGGCCACGTCGGCGCCGTGTATCAGTGC
TGCTTCTCGGCTGATTCCCGGCTGCTGGTCTCGTCGTCCAAGGACACAAC
GCTGAAGGTATGGAATGTGCGGACGGGCAAGTTGCAAGAGGATCTGCCGG
GCCACAAGGACGAGGTGTTTGCAGTAGATTGGAGTCCGGATGGACAGAAG
GTGGGAAGTGGCGGGAAAGACAAGGCGGTGCGGATATGGAGGAATTAGGA
AGAAGATGAGCGAGTACCGTACCGGTTCACATACCAATCCGATGGCAAAG
ACAAAAACGACCAGACAATCGATATCCTCTCTGACTTGTACCACTCCCTC
TTGAAGCCCGGCCTGAAGACAACCGAAGATACTGTACATCTCTACTTCAC
TCCCCAGGCTGTGTTCCGCGTCAAAGCCGTTTCACGATGCTCCGCTGCGA
TCGCTGGACACGGCGAGGCAATTCTTGCGACCAGCTTCTCCCCTGTTAAC
TCGTCCACAATGGTTACCGGCAGCGGTGACTCTACAGCTCGCATCTGGGA
TTGCGACACTGGAACTCCTCTGCACACTCTGAAGGGCCATACCAGCTGGG
TGCTGGCGGTCAGCTACTCGCCCAACGGCGCAATGATTGCGACGGGAAGC
ATGGACAATACCGTGCGCTTCTGGGACGCAAAGAAGGGAACCCCGTTGGG
CGCGCCCTTGAAGGGACACGCCAAATGGATCACCAGTCTGGCCTGGGAAC
CATACCATCTTCAGCAGCCCGGCCGGCCGCGCCTGGCGTCCGCGTCCAAG
GACTCGACAGTCCGCATATGGGACGTGGTCTCGAAACGCATCGACACCGT
TCTCACCGGGCACAAGGGCTCCGTGACCTGCGTCCGCTGGGGCGGAACCG
GGAACATCTACACTGCTTCTCACGACAAGACCATCAAGGTATGGAATGCT
CAGAACGGTACCCTGATCCAGACCCTTTCTGCGCACGCCCACCGCGTCAA
CCACCTGGCCCTGTCTACCGACTTTGTCCTCCGCACTGCGTACCACGACC
ACACCGGCAAGGTGCCGCAGGCCGATGCCGAGAAGGTCGCGGCAGCCAAG
CAGCGATTCGAGCAGGCGGCGACCATCAACAATAAGATCGTCGAGAAGCT
TGTGTCAGCGAGTGACGACTTCACCATGTACTTGTGGGAGCCGGTTAATT
CGAGTAAGCCAATTGCGCGACTGCTGGGACACCAGAAGGAGGTGAACCAT
GTGACGTTCTCGCCGGACATGGCGTACATTGCGTCCGCGGGATTCGACAA
CCATGTTAAGCTGTGGAACGCCCGTGACGGGAAATGGCGACTCTTCTACC
TCCCCCGTCGAAGCGTCAGAGGACAGAGAATGCTGAGCGGGCCCGCCTGC
AGCAGGAGATCCAGAGTGTTCCAGAGAACCTGGGTAGCATTCGTGTGCAA
TTCTTCGACCAGGCGACGGGATCTGCGACCGGGCCGGCGGTGTCCGTTCC
AGTTGCTGATGCCAGTGTGAAGAATCTCGAGACTCTTTTGAATACGTTAC
AAGGCAATGTTTATCACGACACTCCGCGGCCACGTCGGCGCCGTGTATCA
GTGCTGCTTCTCGGCTGATTCCCGGCTGCTGGTCTCGTCGTCCAAGGACA
CAACGCTGAAGGTATGGAATGTGCGGACGGGCAAGTTGCAAGAGGATCTG
CCGGGCCACAAGGACGAGGTGTTTGCAGTAGATTGGAGTCCGGATGGACA
GAAGGTGGGAAGTGGCGGGAAAGACAAGGCGGTGCGGATATGGAGGAATT
AGGAAGAAGATGAGCGAGTACCGTACCGGTTCACATACCAATCCGATGGC
AAAGACAAAAACGACCAGACAATCGATATCCTCTCTGACTTGTACCACTC
CCTCTTGAAGCCCGGCCTGAAGACAACCGAAGATACTGTACATCTCTACT
TCACTCCCCAGGCTGTGTTCCGCGTCAAAGCCGTTTCACGATGCTCCGCT
GCGATCGCTGGACACGGCGAGGCAATTCTTGCGACCAGCTTCTCCCCTGT
TAACTCGTCCACAATGGTTACCGGCAGCGGTGACTCTACAGCTCGCATCT
GGGATTGCGACACTGGAACTCCTCTGCACACTCTGAAGGGCCATACCAGC
TGGGTGCTGGCGGTCAGCTACTCGCCCAACGGCGCAATGATTGCGACGGG
AAGCATGGACAATACCGTGCGCTTCTGGGACGCAAAGAAGGGAACCCCGT
TGGGCGCGCCCTTGAAGGGACACGCCAAATGGATCACCAGTCTGGCCTGG
GAACCATACCATCTTCAGCAGCCCGGCCGGCCGCGCCTGGCGTCCGCGTC
CAAGGACTCGACAGTCCGCATATGGGACGTGGTCTCGAAACGCATCGACA
CCGTTCTCACCGGGCACAAGGGCTCCGTGACCTGCGTCCGCTGGGGCGGA
ACCGGGAACATCTACACTGCTTCTCACGACAAGACCATCAAGGTATGGAA
TGCTCAGAACGGTACCCTGATCCAGACCCTTTCTGCGCACGCCCACCGCG
TCAACCACCTGGCCCTGTCTACCGACTTTGTCCTCCGCACTGCGTACCAC
GACCACACCGGCAAGGTGCCGCAGGCCGATGCCGAGAAGGTCGCGGCAGC
CAAGCAGCGATTCGAGCAGGCGGCGACCATCAACAATAAGATCGTCGAGA
AGCTTGTGTCAGCGAGTGACGACTTCACCATGTACTTGTGGGAGCCGGTT
AATTCGAGTAAGCCAATTGCGCGACTGCTGGGACACCAGAAGGAGGTGAA
CCATGTGACGTTCTCGCCGGACATGGCGTACATTGCGTCCGCGGGATTCG
ACAACCATGTTAAGCTGTGGAACGCCCGTGACGGGAAATGGCGACTCTTC
TACCTCCCCCGTCGAAGCGTCAGAGGACAGAGAATGCTGAGCGGGCCCGC
CTGCAGCAGGAGATCCAGAGTGTTCCAGAGAACCTGGGTAGCATTCGTGT
GCAATTCTTCGACCAGGCGACGGGATCTGCGACCGGGCCGGCGGTGTCCG
TTCCAGTTGCTGATGCCAGTGTGAAGAATCTCGAGACTCTTTTGAATACG
TTACAAGGCAAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011047 |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR012972 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | InterPro:IPR001632 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF08154 |
| Product | WD domain G-beta repeat family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:2141829..2143502 - |
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