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CAN33_39625-T1, CAN33_39625-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_39625-T1
Unique NameCAN33_39625-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2150399..2151562-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_39625-T1 ID=CAN33_39625-T1|Name=CAN33_39625-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1164bp|location=Sequence derived from alignment at NKJJ01000017.1:2150399..2151562- (Aspergillus niger FDAARGOS_311)
ATGTCGCGTAAGTTCGGAAGTCTGATGTTCCCGGTCGATGCTCCACGCCG
AGATCGCTCTCAGCTGACATCATGGCTTTTTCTTTTTCTATGCAACAGTA
TCTCCAGAAGCCCGCGATCAATACATTCCGATCATTGATTCAATTCTCGC
CAGAAGTGATTTGACCACCATCTCTTCAAAAACCATTCGCAACGGCCTTC
AGGATGAGATCGGCTATGATCTTACCCCGCATAAGGTCTGCGCCCCCGGC
CTTTCATTATTGTCGCATATTGCTCTTTGCTCTTTCGATTCGTAGCGGTA
GATCTCAAACATAATGCTAATGTTACTTTTATTCATACAGCTTGCCATCA
AGCAGCTTATCATGGAGCGGTTCGACGTCTGTGCGGCACAAAAGGGCATC
CAAACCGCATCCGAGACACCGGCGACCTCTGCTTCCACCACCAATGGCCA
TGGGAAAGACCACGACTCGGTGACCCCTGTTGAGCCGTCCTCTCCGGCCC
AATCTTCCATGTCGCAGAAACGCCAAGCGGAGAGTGAGGAACATTCGGAC
ACTTCAAGCAAGACTCCTCCTGTTAAGAAGCAGAAGCCCGACAATGACAT
CGATGCGGATGCCCTGTTCGCGGCCAAACTTCAGGCCGAGGAAAACATGC
GTGCGCGCCAAACCCGCGGGGCTAGTACACGCAGAAGCCAGCCTGTGAAG
AAGAAGCAGCCTGCCAAGGCAAAGACATCCAAGAAAGTGAAGGCTGAGGA
CGATTCGGACCTTGAATCGGGCTCGGACTCAGGAAAGAAGGTCAACAGAT
CTGGCGGGTTTCACGTATGCTGCAAATATTTCCTACTGGAGGTGACTGGT
GCTGACGGCTGTCTAGAAACCGCTGACTCTTTCCCCGGCACTTTCGGCTT
TGTTGGATGGCGAGGTGACGGTATGACTATTTCTTCCCATTTCCGGTCGG
GCAAGAACTACTACTAACATTCGGACAGCTCTCGCGACCGCAGACAGTGA
AGCGGCTTTGGCAATACATCCACGAGCATGATCTTCAGGATCCCAATGAC
CGGCGCCAAATCCGCTGTGACGATGCGATGCGTGCCGTGTTCAAGCAAGA
TCGCATACACATGTTTACGATGACCAAAATCCTCAGCCAGAATCTGTATA
GTCCCGATGAATAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2150399..2151562-

>CAN33_39625-T1 ID=CAN33_39625-T1|Name=CAN33_39625-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4350bp|location=Sequence derived from alignment at NKJJ01000017.1:2150399..2151562- (Aspergillus niger FDAARGOS_311)
CTCTCGCGACCGCAGACAGTGAAGCGGCTTTGGCAATACATCCACGAGCA
TGATCTTCAGGATCCCAATGACCGGCGCCAAATCCGCTGTGACGATGCGA
TGCGTGCCGTGTTCAAGCAAGATCGCATACACATGTTTACGATGACCAAA
ATCCTCAGCCAGAATCTGTATAGTCCCGATGAATAAAAACCGCTGACTCT
TTCCCCGGCACTTTCGGCTTTGTTGGATGGCGAGGTGACGCTTGCCATCA
AGCAGCTTATCATGGAGCGGTTCGACGTCTGTGCGGCACAAAAGGGCATC
CAAACCGCATCCGAGACACCGGCGACCTCTGCTTCCACCACCAATGGCCA
TGGGAAAGACCACGACTCGGTGACCCCTGTTGAGCCGTCCTCTCCGGCCC
AATCTTCCATGTCGCAGAAACGCCAAGCGGAGAGTGAGGAACATTCGGAC
ACTTCAAGCAAGACTCCTCCTGTTAAGAAGCAGAAGCCCGACAATGACAT
CGATGCGGATGCCCTGTTCGCGGCCAAACTTCAGGCCGAGGAAAACATGC
GTGCGCGCCAAACCCGCGGGGCTAGTACACGCAGAAGCCAGCCTGTGAAG
AAGAAGCAGCCTGCCAAGGCAAAGACATCCAAGAAAGTGAAGGCTGAGGA
CGATTCGGACCTTGAATCGGGCTCGGACTCAGGAAAGAAGGTCAACAGAT
CTGGCGGGTTTCACTATCTCCAGAAGCCCGCGATCAATACATTCCGATCA
TTGATTCAATTCTCGCCAGAAGTGATTTGACCACCATCTCTTCAAAAACC
ATTCGCAACGGCCTTCAGGATGAGATCGGCTATGATCTTACCCCGCATAA
GATGTCGCGTAAGTTCGGAACTCTCGCGACCGCAGACAGTGAAGCGGCTT
TGGCAATACATCCACGAGCATGATCTTCAGGATCCCAATGACCGGCGCCA
AATCCGCTGTGACGATGCGATGCGTGCCGTGTTCAAGCAAGATCGCATAC
ACATGTTTACGATGACCAAAATCCTCAGCCAGAATCTGTATAGTCCCGAT
GAATAAAAACCGCTGACTCTTTCCCCGGCACTTTCGGCTTTGTTGGATGG
CGAGGTGACGCTTGCCATCAAGCAGCTTATCATGGAGCGGTTCGACGTCT
GTGCGGCACAAAAGGGCATCCAAACCGCATCCGAGACACCGGCGACCTCT
GCTTCCACCACCAATGGCCATGGGAAAGACCACGACTCGGTGACCCCTGT
TGAGCCGTCCTCTCCGGCCCAATCTTCCATGTCGCAGAAACGCCAAGCGG
AGAGTGAGGAACATTCGGACACTTCAAGCAAGACTCCTCCTGTTAAGAAG
CAGAAGCCCGACAATGACATCGATGCGGATGCCCTGTTCGCGGCCAAACT
TCAGGCCGAGGAAAACATGCGTGCGCGCCAAACCCGCGGGGCTAGTACAC
GCAGAAGCCAGCCTGTGAAGAAGAAGCAGCCTGCCAAGGCAAAGACATCC
AAGAAAGTGAAGGCTGAGGACGATTCGGACCTTGAATCGGGCTCGGACTC
AGGAAAGAAGGTCAACAGATCTGGCGGGTTTCACTATCTCCAGAAGCCCG
CGATCAATACATTCCGATCATTGATTCAATTCTCGCCAGAAGTGATTTGA
CCACCATCTCTTCAAAAACCATTCGCAACGGCCTTCAGGATGAGATCGGC
TATGATCTTACCCCGCATAAGATGTCGCGTAAGTTCGGAACTCTCGCGAC
CGCAGACAGTGAAGCGGCTTTGGCAATACATCCACGAGCATGATCTTCAG
GATCCCAATGACCGGCGCCAAATCCGCTGTGACGATGCGATGCGTGCCGT
GTTCAAGCAAGATCGCATACACATGTTTACGATGACCAAAATCCTCAGCC
AGAATCTGTATAGTCCCGATGAATAAAAACCGCTGACTCTTTCCCCGGCA
CTTTCGGCTTTGTTGGATGGCGAGGTGACGCTTGCCATCAAGCAGCTTAT
CATGGAGCGGTTCGACGTCTGTGCGGCACAAAAGGGCATCCAAACCGCAT
CCGAGACACCGGCGACCTCTGCTTCCACCACCAATGGCCATGGGAAAGAC
CACGACTCGGTGACCCCTGTTGAGCCGTCCTCTCCGGCCCAATCTTCCAT
GTCGCAGAAACGCCAAGCGGAGAGTGAGGAACATTCGGACACTTCAAGCA
AGACTCCTCCTGTTAAGAAGCAGAAGCCCGACAATGACATCGATGCGGAT
GCCCTGTTCGCGGCCAAACTTCAGGCCGAGGAAAACATGCGTGCGCGCCA
AACCCGCGGGGCTAGTACACGCAGAAGCCAGCCTGTGAAGAAGAAGCAGC
CTGCCAAGGCAAAGACATCCAAGAAAGTGAAGGCTGAGGACGATTCGGAC
CTTGAATCGGGCTCGGACTCAGGAAAGAAGGTCAACAGATCTGGCGGGTT
TCACTATCTCCAGAAGCCCGCGATCAATACATTCCGATCATTGATTCAAT
TCTCGCCAGAAGTGATTTGACCACCATCTCTTCAAAAACCATTCGCAACG
GCCTTCAGGATGAGATCGGCTATGATCTTACCCCGCATAAGATGTCGCGT
AAGTTCGGAACTCTCGCGACCGCAGACAGTGAAGCGGCTTTGGCAATACA
TCCACGAGCATGATCTTCAGGATCCCAATGACCGGCGCCAAATCCGCTGT
GACGATGCGATGCGTGCCGTGTTCAAGCAAGATCGCATACACATGTTTAC
GATGACCAAAATCCTCAGCCAGAATCTGTATAGTCCCGATGAATAAAAAC
CGCTGACTCTTTCCCCGGCACTTTCGGCTTTGTTGGATGGCGAGGTGACG
CTTGCCATCAAGCAGCTTATCATGGAGCGGTTCGACGTCTGTGCGGCACA
AAAGGGCATCCAAACCGCATCCGAGACACCGGCGACCTCTGCTTCCACCA
CCAATGGCCATGGGAAAGACCACGACTCGGTGACCCCTGTTGAGCCGTCC
TCTCCGGCCCAATCTTCCATGTCGCAGAAACGCCAAGCGGAGAGTGAGGA
ACATTCGGACACTTCAAGCAAGACTCCTCCTGTTAAGAAGCAGAAGCCCG
ACAATGACATCGATGCGGATGCCCTGTTCGCGGCCAAACTTCAGGCCGAG
GAAAACATGCGTGCGCGCCAAACCCGCGGGGCTAGTACACGCAGAAGCCA
GCCTGTGAAGAAGAAGCAGCCTGCCAAGGCAAAGACATCCAAGAAAGTGA
AGGCTGAGGACGATTCGGACCTTGAATCGGGCTCGGACTCAGGAAAGAAG
GTCAACAGATCTGGCGGGTTTCACTATCTCCAGAAGCCCGCGATCAATAC
ATTCCGATCATTGATTCAATTCTCGCCAGAAGTGATTTGACCACCATCTC
TTCAAAAACCATTCGCAACGGCCTTCAGGATGAGATCGGCTATGATCTTA
CCCCGCATAAGATGTCGCGTAAGTTCGGAACTCTCGCGACCGCAGACAGT
GAAGCGGCTTTGGCAATACATCCACGAGCATGATCTTCAGGATCCCAATG
ACCGGCGCCAAATCCGCTGTGACGATGCGATGCGTGCCGTGTTCAAGCAA
GATCGCATACACATGTTTACGATGACCAAAATCCTCAGCCAGAATCTGTA
TAGTCCCGATGAATAAAAACCGCTGACTCTTTCCCCGGCACTTTCGGCTT
TGTTGGATGGCGAGGTGACGCTTGCCATCAAGCAGCTTATCATGGAGCGG
TTCGACGTCTGTGCGGCACAAAAGGGCATCCAAACCGCATCCGAGACACC
GGCGACCTCTGCTTCCACCACCAATGGCCATGGGAAAGACCACGACTCGG
TGACCCCTGTTGAGCCGTCCTCTCCGGCCCAATCTTCCATGTCGCAGAAA
CGCCAAGCGGAGAGTGAGGAACATTCGGACACTTCAAGCAAGACTCCTCC
TGTTAAGAAGCAGAAGCCCGACAATGACATCGATGCGGATGCCCTGTTCG
CGGCCAAACTTCAGGCCGAGGAAAACATGCGTGCGCGCCAAACCCGCGGG
GCTAGTACACGCAGAAGCCAGCCTGTGAAGAAGAAGCAGCCTGCCAAGGC
AAAGACATCCAAGAAAGTGAAGGCTGAGGACGATTCGGACCTTGAATCGG
GCTCGGACTCAGGAAAGAAGGTCAACAGATCTGGCGGGTTTCACTATCTC
CAGAAGCCCGCGATCAATACATTCCGATCATTGATTCAATTCTCGCCAGA
AGTGATTTGACCACCATCTCTTCAAAAACCATTCGCAACGGCCTTCAGGA
TGAGATCGGCTATGATCTTACCCCGCATAAGATGTCGCGTAAGTTCGGAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_39625CAN33_39625Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39625-T1CAN33_39625-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39625-T1.cdsCAN33_39625-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39625-T1.exon5CAN33_39625-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_39625-T1.exon4CAN33_39625-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_39625-T1.exon3CAN33_39625-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_39625-T1.exon2CAN33_39625-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_39625-T1.exon1CAN33_39625-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR014876
DBxrefInterPro:IPR036885
DBxrefInterPro:IPR003121
DBxrefInterPro:IPR019835
DBxrefPFAM:PF02201
DBxrefPFAM:PF08766
ProductSWIB/MDM2 domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2150399..2151562 -
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