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CAN33_39665-T1, CAN33_39665-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_39665-T1
Unique NameCAN33_39665-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2171955..2173305+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_39665-T1 ID=CAN33_39665-T1|Name=CAN33_39665-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1351bp|location=Sequence derived from alignment at NKJJ01000017.1:2171955..2173305+ (Aspergillus niger FDAARGOS_311)
ATGTCGGTATGTTTTTGCTTCTTCCAGCATCTCAACCCTCTCAATGGCAA
TGTTAATACTCATGATGCCTCCAGTTCTTCATTGAAAACCCTAATGTCGG
GGACAGATGCTCCCTCGAGGATTCCAGAAGTAAGTGCGCCCGTGACTCAC
TTGCAAAATTCCGTCACCCGTTAACCCTCGGTTTCTCTTTTCCTCTACAG
TTCGTGGATACAACCCTCTCACACCCCCCAACCTCCTTCAGCATGAGATC
GCCATGACGGAGAAGTCCCGGCGAACGGTCATGGAAGGTCGTGAGGAGGC
TATTGCTATCGTCCAGGGCACAGACACCGACCGTCGCCGTTTGCTGGTTG
TCATCGGTCCCTGCTCCATCCACGACCCTGAAATGGCCCTCGAATACTGC
GATCGCCTCATGAAGATGAAGGAGAAGTACAAGGATGAGCTGCTGATTGT
CATGCGCTCCTACCTCGAGAAGCCCCGTACCACCGTCGGCTGGAAGGGTC
TCATCAACGACCCCGACATTGACAACAGCTTCAAGATCAACAAGGGTCTT
CGCACCTCCCGTCAACTTTTCGTCGACCTGACCAACAAGGGTATGCCCAT
CGCCAGTGAGATGCTCGATACCATCTCCCCCCAGTTTCTGGCCGACTGTC
TCTCCGTCGGCGCCGTTGGTGCTCGCACCACCGAGTCCCAGGTCCACCGT
GAGTTGGCCTCGGGTCTGTCCTTCCCCGTTGGTTTCAAGAACGGTACCGA
CGGCTCCCTGGATGTCGCTGTCGATGCCATTGGCTCCGTCAAGCACCCTC
ACCACTTCCTGTCCGTCACCAAGCCCGGTGTCGCTGCTATCGTCGGCACC
GTGGGCAACCCCGACTGCTTCGTCATCCTCCGTGGTGGCAAGAAGGGCCC
CAACTACGATGCCCAGAGCATCGCCGAGGCTAAGGCCAAGCTGACCGCCC
AGGGCATGCCTCCCCGCCTCATGGTCGACTGCAGCCACGGTAACTCGCAG
AAGAACCACAAGAACCAGCCCAAGGTGGCTGCTGTTCTGGCCGAGCAAAT
CGCCGCTGGAGAGACCGCCATCATGGGTGTCATGATCGAGAGCAACATCA
ACGAGGGTATGTTCTACCTTTTTTCCCTCCCCCCAACCCAACACCTTCCA
TCACACCATCCCACTAACATCACCACAACAGGCAACCAAAAGGTTCCTCC
CGAGGGCAAGGCCGGCCTCAAGTACGGTGTCAGTATCACCGACGCCTGCA
TCCACTGGGAAGACACGGAACTTGTTCTGGAGAACCTGGCACAGGCTGTG
CGCACCCGCCGGGAAAAGCTTGCTATCAATGGCAACGGCAACTCCCAATA
A
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2171955..2173305+

>CAN33_39665-T1 ID=CAN33_39665-T1|Name=CAN33_39665-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4548bp|location=Sequence derived from alignment at NKJJ01000017.1:2171955..2173305+ (Aspergillus niger FDAARGOS_311)
ATGTCGTTCTTCATTGAAAACCCTAATGTCGGGGACAGATGCTCCCTCGA
GGATTCCAGAATTCGTGGATACAACCCTCTCACACCCCCCAACCTCCTTC
AGCATGAGATCGCCATGACGGAGAAGTCCCGGCGAACGGTCATGGAAGGT
CGTGAGGAGGCTATTGCTATCGTCCAGGGCACAGACACCGACCGTCGCCG
TTTGCTGGTTGTCATCGGTCCCTGCTCCATCCACGACCCTGAAATGGCCC
TCGAATACTGCGATCGCCTCATGAAGATGAAGGAGAAGTACAAGGATGAG
CTGCTGATTGTCATGCGCTCCTACCTCGAGAAGCCCCGTACCACCGTCGG
CTGGAAGGGTCTCATCAACGACCCCGACATTGACAACAGCTTCAAGATCA
ACAAGGGTCTTCGCACCTCCCGTCAACTTTTCGTCGACCTGACCAACAAG
GGTATGCCCATCGCCAGTGAGATGCTCGATACCATCTCCCCCCAGTTTCT
GGCCGACTGTCTCTCCGTCGGCGCCGTTGGTGCTCGCACCACCGAGTCCC
AGGTCCACCGTGAGTTGGCCTCGGGTCTGTCCTTCCCCGTTGGTTTCAAG
AACGGTACCGACGGCTCCCTGGATGTCGCTGTCGATGCCATTGGCTCCGT
CAAGCACCCTCACCACTTCCTGTCCGTCACCAAGCCCGGTGTCGCTGCTA
TCGTCGGCACCGTGGGCAACCCCGACTGCTTCGTCATCCTCCGTGGTGGC
AAGAAGGGCCCCAACTACGATGCCCAGAGCATCGCCGAGGCTAAGGCCAA
GCTGACCGCCCAGGGCATGCCTCCCCGCCTCATGGTCGACTGCAGCCACG
GTAACTCGCAGAAGAACCACAAGAACCAGCCCAAGGTGGCTGCTGTTCTG
GCCGAGCAAATCGCCGCTGGAGAGACCGCCATCATGGGTGTCATGATCGA
GAGCAACATCAACGAGGGCAACCAAAAGGTTCCTCCCGAGGGCAAGGCCG
GCCTCAAGTACGGTGTCAGTATCACCGACGCCTGCATCCACTGGGAAGAC
ACGGAACTTGTTCTGGAGAACCTGGCACAGGCTGTGCGCACCCGCCGGGA
AAAGCTTGCTATCAATGGCAACGGCAACTCCCAATAAATGTCGTTCTTCA
TTGAAAACCCTAATGTCGGGGACAGATGCTCCCTCGAGGATTCCAGAATT
CGTGGATACAACCCTCTCACACCCCCCAACCTCCTTCAGCATGAGATCGC
CATGACGGAGAAGTCCCGGCGAACGGTCATGGAAGGTCGTGAGGAGGCTA
TTGCTATCGTCCAGGGCACAGACACCGACCGTCGCCGTTTGCTGGTTGTC
ATCGGTCCCTGCTCCATCCACGACCCTGAAATGGCCCTCGAATACTGCGA
TCGCCTCATGAAGATGAAGGAGAAGTACAAGGATGAGCTGCTGATTGTCA
TGCGCTCCTACCTCGAGAAGCCCCGTACCACCGTCGGCTGGAAGGGTCTC
ATCAACGACCCCGACATTGACAACAGCTTCAAGATCAACAAGGGTCTTCG
CACCTCCCGTCAACTTTTCGTCGACCTGACCAACAAGGGTATGCCCATCG
CCAGTGAGATGCTCGATACCATCTCCCCCCAGTTTCTGGCCGACTGTCTC
TCCGTCGGCGCCGTTGGTGCTCGCACCACCGAGTCCCAGGTCCACCGTGA
GTTGGCCTCGGGTCTGTCCTTCCCCGTTGGTTTCAAGAACGGTACCGACG
GCTCCCTGGATGTCGCTGTCGATGCCATTGGCTCCGTCAAGCACCCTCAC
CACTTCCTGTCCGTCACCAAGCCCGGTGTCGCTGCTATCGTCGGCACCGT
GGGCAACCCCGACTGCTTCGTCATCCTCCGTGGTGGCAAGAAGGGCCCCA
ACTACGATGCCCAGAGCATCGCCGAGGCTAAGGCCAAGCTGACCGCCCAG
GGCATGCCTCCCCGCCTCATGGTCGACTGCAGCCACGGTAACTCGCAGAA
GAACCACAAGAACCAGCCCAAGGTGGCTGCTGTTCTGGCCGAGCAAATCG
CCGCTGGAGAGACCGCCATCATGGGTGTCATGATCGAGAGCAACATCAAC
GAGGGCAACCAAAAGGTTCCTCCCGAGGGCAAGGCCGGCCTCAAGTACGG
TGTCAGTATCACCGACGCCTGCATCCACTGGGAAGACACGGAACTTGTTC
TGGAGAACCTGGCACAGGCTGTGCGCACCCGCCGGGAAAAGCTTGCTATC
AATGGCAACGGCAACTCCCAATAAATGTCGTTCTTCATTGAAAACCCTAA
TGTCGGGGACAGATGCTCCCTCGAGGATTCCAGAATTCGTGGATACAACC
CTCTCACACCCCCCAACCTCCTTCAGCATGAGATCGCCATGACGGAGAAG
TCCCGGCGAACGGTCATGGAAGGTCGTGAGGAGGCTATTGCTATCGTCCA
GGGCACAGACACCGACCGTCGCCGTTTGCTGGTTGTCATCGGTCCCTGCT
CCATCCACGACCCTGAAATGGCCCTCGAATACTGCGATCGCCTCATGAAG
ATGAAGGAGAAGTACAAGGATGAGCTGCTGATTGTCATGCGCTCCTACCT
CGAGAAGCCCCGTACCACCGTCGGCTGGAAGGGTCTCATCAACGACCCCG
ACATTGACAACAGCTTCAAGATCAACAAGGGTCTTCGCACCTCCCGTCAA
CTTTTCGTCGACCTGACCAACAAGGGTATGCCCATCGCCAGTGAGATGCT
CGATACCATCTCCCCCCAGTTTCTGGCCGACTGTCTCTCCGTCGGCGCCG
TTGGTGCTCGCACCACCGAGTCCCAGGTCCACCGTGAGTTGGCCTCGGGT
CTGTCCTTCCCCGTTGGTTTCAAGAACGGTACCGACGGCTCCCTGGATGT
CGCTGTCGATGCCATTGGCTCCGTCAAGCACCCTCACCACTTCCTGTCCG
TCACCAAGCCCGGTGTCGCTGCTATCGTCGGCACCGTGGGCAACCCCGAC
TGCTTCGTCATCCTCCGTGGTGGCAAGAAGGGCCCCAACTACGATGCCCA
GAGCATCGCCGAGGCTAAGGCCAAGCTGACCGCCCAGGGCATGCCTCCCC
GCCTCATGGTCGACTGCAGCCACGGTAACTCGCAGAAGAACCACAAGAAC
CAGCCCAAGGTGGCTGCTGTTCTGGCCGAGCAAATCGCCGCTGGAGAGAC
CGCCATCATGGGTGTCATGATCGAGAGCAACATCAACGAGGGCAACCAAA
AGGTTCCTCCCGAGGGCAAGGCCGGCCTCAAGTACGGTGTCAGTATCACC
GACGCCTGCATCCACTGGGAAGACACGGAACTTGTTCTGGAGAACCTGGC
ACAGGCTGTGCGCACCCGCCGGGAAAAGCTTGCTATCAATGGCAACGGCA
ACTCCCAATAAATGTCGTTCTTCATTGAAAACCCTAATGTCGGGGACAGA
TGCTCCCTCGAGGATTCCAGAATTCGTGGATACAACCCTCTCACACCCCC
CAACCTCCTTCAGCATGAGATCGCCATGACGGAGAAGTCCCGGCGAACGG
TCATGGAAGGTCGTGAGGAGGCTATTGCTATCGTCCAGGGCACAGACACC
GACCGTCGCCGTTTGCTGGTTGTCATCGGTCCCTGCTCCATCCACGACCC
TGAAATGGCCCTCGAATACTGCGATCGCCTCATGAAGATGAAGGAGAAGT
ACAAGGATGAGCTGCTGATTGTCATGCGCTCCTACCTCGAGAAGCCCCGT
ACCACCGTCGGCTGGAAGGGTCTCATCAACGACCCCGACATTGACAACAG
CTTCAAGATCAACAAGGGTCTTCGCACCTCCCGTCAACTTTTCGTCGACC
TGACCAACAAGGGTATGCCCATCGCCAGTGAGATGCTCGATACCATCTCC
CCCCAGTTTCTGGCCGACTGTCTCTCCGTCGGCGCCGTTGGTGCTCGCAC
CACCGAGTCCCAGGTCCACCGTGAGTTGGCCTCGGGTCTGTCCTTCCCCG
TTGGTTTCAAGAACGGTACCGACGGCTCCCTGGATGTCGCTGTCGATGCC
ATTGGCTCCGTCAAGCACCCTCACCACTTCCTGTCCGTCACCAAGCCCGG
TGTCGCTGCTATCGTCGGCACCGTGGGCAACCCCGACTGCTTCGTCATCC
TCCGTGGTGGCAAGAAGGGCCCCAACTACGATGCCCAGAGCATCGCCGAG
GCTAAGGCCAAGCTGACCGCCCAGGGCATGCCTCCCCGCCTCATGGTCGA
CTGCAGCCACGGTAACTCGCAGAAGAACCACAAGAACCAGCCCAAGGTGG
CTGCTGTTCTGGCCGAGCAAATCGCCGCTGGAGAGACCGCCATCATGGGT
GTCATGATCGAGAGCAACATCAACGAGGGCAACCAAAAGGTTCCTCCCGA
GGGCAAGGCCGGCCTCAAGTACGGTGTCAGTATCACCGACGCCTGCATCC
ACTGGGAAGACACGGAACTTGTTCTGGAGAACCTGGCACAGGCTGTGCGC
ACCCGCCGGGAAAAGCTTGCTATCAATGGCAACGGCAACTCCCAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009073aromatic amino acid family biosynthetic process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:00038493-deoxy-7-phosphoheptulonate synthase activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
AMT16CAN33_39665Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39665-T1.exon1CAN33_39665-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_39665-T1.exon2CAN33_39665-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_39665-T1.exon3CAN33_39665-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_39665-T1.exon4CAN33_39665-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39665-T1.cdsCAN33_39665-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39665-T1CAN33_39665-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR006219
DBxrefInterPro:IPR006218
DBxrefInterPro:IPR013785
DBxrefPFAM:PF00793
ProductPhospho-2-dehydro-3-deoxyheptonate aldolase amt16
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2171955..2173305 +
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