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CAN33_39685-T1, CAN33_39685-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_39685-T1
Unique NameCAN33_39685-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2188243..2190151+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_39685-T1 ID=CAN33_39685-T1|Name=CAN33_39685-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1909bp|location=Sequence derived from alignment at NKJJ01000017.1:2188243..2190151+ (Aspergillus niger FDAARGOS_311)
ATGCTACGGTTGCCTATACAGGCCCGTGGCCTCCTCAGGGCGCACCGCAA
CTCTCCCTTGCGCTATCGGCATGCGCCGAAGCCGCTTACCCGCCCTGTTC
GCCGTGGATTCACCAGCTCATCAACCACTTTCCCTGCCTGGTCCCAATTC
GATCGCTCAGATTTCACAAACCAGCCGTGGACTGGCAGTTATGAACCGGA
TCTCCCAACAACCGGACCTCTTGCGTCAGCTCCGGCTTTCGGAGCCCCTC
GGGTGACCCCCAGAACGTTGAAGCAGTACCTAGACCAGTTCGTCGTTGGC
CAGGATCGTGCAAAGAAGATACTTAGCGTCGCGGTCTTCAACCACTACCA
ACGGGTGCAAGAGCTGCAGAGACGTGAGGAGGAAAACGCAGAGTTGCTAG
CGAAACGGGCGCGCAGAGAGGCAATTGAGCATCACCCGGTCGAAGGTAGG
TTATCTGTATTCCGTTGCCTGTCAAATCACCTGAGCCCTGCTAAGCCAGT
CAGACGAGTTCCCAGGCCAACAACAAACCGTCAATACAACCCCCGAAATA
GGTACATTGCCTACATCAGCGCAACCTGGACTTGACGATTCGTCGGAATT
ACAACTGGAGAAATCCAACATCCTTCTATTGGGGCCATCTGGCGTTGGAA
AGACGCTCATGGCAAAGACACTGGCAAGGATACTATCCGTCCCGTTCAGC
ATTTCGGACTGCACACCGTTCACGCAGGCTGGTTACATTGGAGAGGATGC
AGAAGTTTGCGTCCACAGGCTTCTGGCCGCTGCGAATTATGATGTCGAGC
AGGCGGAGCGCGGCATAATCGTGTTGGACGAAGTGGACAAAATTGCCGCA
GCAAAGGTCAGCCACGGGAAGGACGTCAGTGGTGAAGGAGTACAACAAGC
GCTGCTCAAGCTCATCGAGGGCACAACGGTACAAGTGCAAGCGAAACAAG
AACGAAGTGCACCTCGTGTCGGCAACTCCCCCAACACATTTCCCTCCAAC
AACCCGCTAGGGAACTCCCCATTCAACCCCAATGGCGGCAACATGCCCCA
AAAAGGCGAGGTCTACAACGTCCGCACAGACAACATCCTCTTCATTTTCT
CCGGCGCTTTCGTCGGGCTACACAAAGTAATCATGGACCGGATATCTCGC
GGATCAATCGGCTTCGGCCAGCCCGTCCGCGGTTCAGCCCTCACAAACAA
TCGATCTCGCGACCACACACCGGGGAACAACGAACCGATCCCCATCCTCC
CGGGATCCGAAGAAGAAGCCCTATACAAAAAGCACCTCCCCTTCTTCACG
TCGGCCACCTCTCCCAACTCCCCCGACAGCGAACCAACCTACTTCAACGC
CCTCGATCTCCTCAACCCCACCGACCTGCAAAACTACGGCTTCATCCCTG
AACTAGTCGGCCGTGTACCCGTCACCGCCGCCCTCTCCACTTTAACCACC
CCTCTGCTCGTCCGCATCCTCACTGAACCCCGCAACTCCCTCCTAGCCCA
ATACACCACCCTCTTCAGCCTCTCCGGCATTGAAATTCGCTTCACCACTC
CCGCCCTGCACAAAATCGCCGCCAATGCCTTCACAATGGGTACAGGCGCG
CGCGCCCTCCGCACCGAACTAGAAACCATCCTCAGCGACGCAATGTTCGA
AACCCCCGGCTCGAGCGTCAAATTCGTCCTGGTCACAGAATCCGTCGCGG
AGCGGAACGAGAAACCAATATATCTTGCGCGCGGTCAGGGCGGACGCTTC
CATTCCATGATTGCCGCTGAGGAAAGTAAGTGGGAGGAGAAGGTCCGTCG
AGAGAAAGCGGAGAAGAGTAAAGATAAGAAAGCGAAGACACGGCCGGCGG
ATGAACTACCCCCGATTTCGAGTTTCAGGGAATATCGCACGCAGACGGCT
GGGTTTTAG
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2188243..2190151+

>CAN33_39685-T1 ID=CAN33_39685-T1|Name=CAN33_39685-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3702bp|location=Sequence derived from alignment at NKJJ01000017.1:2188243..2190151+ (Aspergillus niger FDAARGOS_311)
ATGCTACGGTTGCCTATACAGGCCCGTGGCCTCCTCAGGGCGCACCGCAA
CTCTCCCTTGCGCTATCGGCATGCGCCGAAGCCGCTTACCCGCCCTGTTC
GCCGTGGATTCACCAGCTCATCAACCACTTTCCCTGCCTGGTCCCAATTC
GATCGCTCAGATTTCACAAACCAGCCGTGGACTGGCAGTTATGAACCGGA
TCTCCCAACAACCGGACCTCTTGCGTCAGCTCCGGCTTTCGGAGCCCCTC
GGGTGACCCCCAGAACGTTGAAGCAGTACCTAGACCAGTTCGTCGTTGGC
CAGGATCGTGCAAAGAAGATACTTAGCGTCGCGGTCTTCAACCACTACCA
ACGGGTGCAAGAGCTGCAGAGACGTGAGGAGGAAAACGCAGAGTTGCTAG
CGAAACGGGCGCGCAGAGAGGCAATTGAGCATCACCCGGTCGAAGACGAG
TTCCCAGGCCAACAACAAACCGTCAATACAACCCCCGAAATAGGTACATT
GCCTACATCAGCGCAACCTGGACTTGACGATTCGTCGGAATTACAACTGG
AGAAATCCAACATCCTTCTATTGGGGCCATCTGGCGTTGGAAAGACGCTC
ATGGCAAAGACACTGGCAAGGATACTATCCGTCCCGTTCAGCATTTCGGA
CTGCACACCGTTCACGCAGGCTGGTTACATTGGAGAGGATGCAGAAGTTT
GCGTCCACAGGCTTCTGGCCGCTGCGAATTATGATGTCGAGCAGGCGGAG
CGCGGCATAATCGTGTTGGACGAAGTGGACAAAATTGCCGCAGCAAAGGT
CAGCCACGGGAAGGACGTCAGTGGTGAAGGAGTACAACAAGCGCTGCTCA
AGCTCATCGAGGGCACAACGGTACAAGTGCAAGCGAAACAAGAACGAAGT
GCACCTCGTGTCGGCAACTCCCCCAACACATTTCCCTCCAACAACCCGCT
AGGGAACTCCCCATTCAACCCCAATGGCGGCAACATGCCCCAAAAAGGCG
AGGTCTACAACGTCCGCACAGACAACATCCTCTTCATTTTCTCCGGCGCT
TTCGTCGGGCTACACAAAGTAATCATGGACCGGATATCTCGCGGATCAAT
CGGCTTCGGCCAGCCCGTCCGCGGTTCAGCCCTCACAAACAATCGATCTC
GCGACCACACACCGGGGAACAACGAACCGATCCCCATCCTCCCGGGATCC
GAAGAAGAAGCCCTATACAAAAAGCACCTCCCCTTCTTCACGTCGGCCAC
CTCTCCCAACTCCCCCGACAGCGAACCAACCTACTTCAACGCCCTCGATC
TCCTCAACCCCACCGACCTGCAAAACTACGGCTTCATCCCTGAACTAGTC
GGCCGTGTACCCGTCACCGCCGCCCTCTCCACTTTAACCACCCCTCTGCT
CGTCCGCATCCTCACTGAACCCCGCAACTCCCTCCTAGCCCAATACACCA
CCCTCTTCAGCCTCTCCGGCATTGAAATTCGCTTCACCACTCCCGCCCTG
CACAAAATCGCCGCCAATGCCTTCACAATGGGTACAGGCGCGCGCGCCCT
CCGCACCGAACTAGAAACCATCCTCAGCGACGCAATGTTCGAAACCCCCG
GCTCGAGCGTCAAATTCGTCCTGGTCACAGAATCCGTCGCGGAGCGGAAC
GAGAAACCAATATATCTTGCGCGCGGTCAGGGCGGACGCTTCCATTCCAT
GATTGCCGCTGAGGAAAGTAAGTGGGAGGAGAAGGTCCGTCGAGAGAAAG
CGGAGAAGAGTAAAGATAAGAAAGCGAAGACACGGCCGGCGGATGAACTA
CCCCCGATTTCGAGTTTCAGGGAATATCGCACGCAGACGGCTGGGTTTTA
GATGCTACGGTTGCCTATACAGGCCCGTGGCCTCCTCAGGGCGCACCGCA
ACTCTCCCTTGCGCTATCGGCATGCGCCGAAGCCGCTTACCCGCCCTGTT
CGCCGTGGATTCACCAGCTCATCAACCACTTTCCCTGCCTGGTCCCAATT
CGATCGCTCAGATTTCACAAACCAGCCGTGGACTGGCAGTTATGAACCGG
ATCTCCCAACAACCGGACCTCTTGCGTCAGCTCCGGCTTTCGGAGCCCCT
CGGGTGACCCCCAGAACGTTGAAGCAGTACCTAGACCAGTTCGTCGTTGG
CCAGGATCGTGCAAAGAAGATACTTAGCGTCGCGGTCTTCAACCACTACC
AACGGGTGCAAGAGCTGCAGAGACGTGAGGAGGAAAACGCAGAGTTGCTA
GCGAAACGGGCGCGCAGAGAGGCAATTGAGCATCACCCGGTCGAAGACGA
GTTCCCAGGCCAACAACAAACCGTCAATACAACCCCCGAAATAGGTACAT
TGCCTACATCAGCGCAACCTGGACTTGACGATTCGTCGGAATTACAACTG
GAGAAATCCAACATCCTTCTATTGGGGCCATCTGGCGTTGGAAAGACGCT
CATGGCAAAGACACTGGCAAGGATACTATCCGTCCCGTTCAGCATTTCGG
ACTGCACACCGTTCACGCAGGCTGGTTACATTGGAGAGGATGCAGAAGTT
TGCGTCCACAGGCTTCTGGCCGCTGCGAATTATGATGTCGAGCAGGCGGA
GCGCGGCATAATCGTGTTGGACGAAGTGGACAAAATTGCCGCAGCAAAGG
TCAGCCACGGGAAGGACGTCAGTGGTGAAGGAGTACAACAAGCGCTGCTC
AAGCTCATCGAGGGCACAACGGTACAAGTGCAAGCGAAACAAGAACGAAG
TGCACCTCGTGTCGGCAACTCCCCCAACACATTTCCCTCCAACAACCCGC
TAGGGAACTCCCCATTCAACCCCAATGGCGGCAACATGCCCCAAAAAGGC
GAGGTCTACAACGTCCGCACAGACAACATCCTCTTCATTTTCTCCGGCGC
TTTCGTCGGGCTACACAAAGTAATCATGGACCGGATATCTCGCGGATCAA
TCGGCTTCGGCCAGCCCGTCCGCGGTTCAGCCCTCACAAACAATCGATCT
CGCGACCACACACCGGGGAACAACGAACCGATCCCCATCCTCCCGGGATC
CGAAGAAGAAGCCCTATACAAAAAGCACCTCCCCTTCTTCACGTCGGCCA
CCTCTCCCAACTCCCCCGACAGCGAACCAACCTACTTCAACGCCCTCGAT
CTCCTCAACCCCACCGACCTGCAAAACTACGGCTTCATCCCTGAACTAGT
CGGCCGTGTACCCGTCACCGCCGCCCTCTCCACTTTAACCACCCCTCTGC
TCGTCCGCATCCTCACTGAACCCCGCAACTCCCTCCTAGCCCAATACACC
ACCCTCTTCAGCCTCTCCGGCATTGAAATTCGCTTCACCACTCCCGCCCT
GCACAAAATCGCCGCCAATGCCTTCACAATGGGTACAGGCGCGCGCGCCC
TCCGCACCGAACTAGAAACCATCCTCAGCGACGCAATGTTCGAAACCCCC
GGCTCGAGCGTCAAATTCGTCCTGGTCACAGAATCCGTCGCGGAGCGGAA
CGAGAAACCAATATATCTTGCGCGCGGTCAGGGCGGACGCTTCCATTCCA
TGATTGCCGCTGAGGAAAGTAAGTGGGAGGAGAAGGTCCGTCGAGAGAAA
GCGGAGAAGAGTAAAGATAAGAAAGCGAAGACACGGCCGGCGGATGAACT
ACCCCCGATTTCGAGTTTCAGGGAATATCGCACGCAGACGGCTGGGTTTT
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_39685CAN33_39685Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39685-T1.exon1CAN33_39685-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_39685-T1.exon2CAN33_39685-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39685-T1.cdsCAN33_39685-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39685-T1CAN33_39685-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR019489
DBxrefInterPro:IPR003593
DBxrefPFAM:PF10431
DBxrefPFAM:PF07728
DBxrefPFAM:PF07724
DBxrefPFAM:PF00004
ProductAAA domain (Cdc48 subfamily) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2188243..2190151 +
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