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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:2194892..2195835+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_39695-T1 ID=CAN33_39695-T1|Name=CAN33_39695-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=944bp|location=Sequence derived from alignment at NKJJ01000017.1:2194892..2195835+ (Aspergillus niger FDAARGOS_311)
ATGGCTAACGACGAGTACGATGTGAGTATCCTCTTTCTCTCATTCGCACC
CCTTGCCAAGCAACGGTATAACTAACGGGCTACTTGGTAGTTTCTCTTCA
AAGGTAAAGTTGCCACTTCCCGTCTCCGCACAGTCGCCGCTCGATCCCAT
CGCCTCTATTGTCGGCCGCATTTTCGCGATACACGGCTAACCAACGACGA
TTGTACTTAACAGTTGTCCTGATTGGAGACTCTGGTGTTGGAAAGTCCAA
CCTTTTGAGTCGTTTCACCCGTAACGAGTTCAACCTGGACTCCAAGTCCA
CCATCGGTGTCGAGTTCGCTACCCGCTCGATCCAGGTCGATTCCAAGACG
ATCAAGGCTCAGATTTGGGATACTGCTGGTCAGGAACGTTACCGTGCCAT
CACCTCCGCTTACTATCGGGGTGCTGTCGGTGCTCTTCTCGTCTACGATA
TCAGTAAGCACCAGACTTACGACAATGTCAACCGGTGGTTGAAGGAACTC
CGCGATCATGCCGACTCCAACATCGTTATCATGTTGGTCGGTAACAAGAG
TGATTTGAGGCACCTGCGGGCTGTGCCCACGGAAGAGGCCAAGCAATTCG
CAAGTATGTTGGAACCTTCGCTGGCTTAGGATGAAATGTGCTGGCGTGCT
AACGTGCTACCAGGCGAGAACAACCTCTCTTTCATCGAGACATCTGCCCT
TGACGCCAGCAACGTCGAGCTTGCTTTCCAGAACATCCTGACAGGTTAGA
CTTGCCCCCGGTCCTCAGTTTACCAGACGAATTCCGTCATGCTGACGTTC
TTGTCACCTTTAGAAATCTACCGTATCGTCTCCAGCAAGGCTCTGGATGG
CGGTGATGCCGGCCAGACCGTTCTGGGCGACCGCCGCGACATGGTGCGGA
TCGACGAGTCGGAGGACCCGAAGACCAAGCAGGGATGCTGTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:2194892..2195835+ >CAN33_39695-T1 ID=CAN33_39695-T1|Name=CAN33_39695-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3180bp|location=Sequence derived from alignment at NKJJ01000017.1:2194892..2195835+ (Aspergillus niger FDAARGOS_311)
ATGGCTAACGACGAGTACGATTTTCTCTTCAAAGTTGTCCTGATTGGAGA
CTCTGGTGTTGGAAAGTCCAACCTTTTGAGTCGTTTCACCCGTAACGAGT
TCAACCTGGACTCCAAGTCCACCATCGGTGTCGAGTTCGCTACCCGCTCG
ATCCAGGTCGATTCCAAGACGATCAAGGCTCAGATTTGGGATACTGCTGG
TCAGGAACGTTACCGTGCCATCACCTCCGCTTACTATCGGGGTGCTGTCG
GTGCTCTTCTCGTCTACGATATCAGTAAGCACCAGACTTACGACAATGTC
AACCGGTGGTTGAAGGAACTCCGCGATCATGCCGACTCCAACATCGTTAT
CATGTTGGTCGGTAACAAGAGTGATTTGAGGCACCTGCGGGCTGTGCCCA
CGGAAGAGGCCAAGCAATTCGCAAGCGAGAACAACCTCTCTTTCATCGAG
ACATCTGCCCTTGACGCCAGCAACGTCGAGCTTGCTTTCCAGAACATCCT
GACAGAAATCTACCGTATCGTCTCCAGCAAGGCTCTGGATGGCGGTGATG
CCGGCCAGACCGTTCTGGGCGACCGCCGCGACATGGTGCGGATCGACGAG
TCGGAGGACCCGAAGACCAAGCAGGGATGCTGTTAAATGGCTAACGACGA
GTACGATTTTCTCTTCAAAGTTGTCCTGATTGGAGACTCTGGTGTTGGAA
AGTCCAACCTTTTGAGTCGTTTCACCCGTAACGAGTTCAACCTGGACTCC
AAGTCCACCATCGGTGTCGAGTTCGCTACCCGCTCGATCCAGGTCGATTC
CAAGACGATCAAGGCTCAGATTTGGGATACTGCTGGTCAGGAACGTTACC
GTGCCATCACCTCCGCTTACTATCGGGGTGCTGTCGGTGCTCTTCTCGTC
TACGATATCAGTAAGCACCAGACTTACGACAATGTCAACCGGTGGTTGAA
GGAACTCCGCGATCATGCCGACTCCAACATCGTTATCATGTTGGTCGGTA
ACAAGAGTGATTTGAGGCACCTGCGGGCTGTGCCCACGGAAGAGGCCAAG
CAATTCGCAAGCGAGAACAACCTCTCTTTCATCGAGACATCTGCCCTTGA
CGCCAGCAACGTCGAGCTTGCTTTCCAGAACATCCTGACAGAAATCTACC
GTATCGTCTCCAGCAAGGCTCTGGATGGCGGTGATGCCGGCCAGACCGTT
CTGGGCGACCGCCGCGACATGGTGCGGATCGACGAGTCGGAGGACCCGAA
GACCAAGCAGGGATGCTGTTAAATGGCTAACGACGAGTACGATTTTCTCT
TCAAAGTTGTCCTGATTGGAGACTCTGGTGTTGGAAAGTCCAACCTTTTG
AGTCGTTTCACCCGTAACGAGTTCAACCTGGACTCCAAGTCCACCATCGG
TGTCGAGTTCGCTACCCGCTCGATCCAGGTCGATTCCAAGACGATCAAGG
CTCAGATTTGGGATACTGCTGGTCAGGAACGTTACCGTGCCATCACCTCC
GCTTACTATCGGGGTGCTGTCGGTGCTCTTCTCGTCTACGATATCAGTAA
GCACCAGACTTACGACAATGTCAACCGGTGGTTGAAGGAACTCCGCGATC
ATGCCGACTCCAACATCGTTATCATGTTGGTCGGTAACAAGAGTGATTTG
AGGCACCTGCGGGCTGTGCCCACGGAAGAGGCCAAGCAATTCGCAAGCGA
GAACAACCTCTCTTTCATCGAGACATCTGCCCTTGACGCCAGCAACGTCG
AGCTTGCTTTCCAGAACATCCTGACAGAAATCTACCGTATCGTCTCCAGC
AAGGCTCTGGATGGCGGTGATGCCGGCCAGACCGTTCTGGGCGACCGCCG
CGACATGGTGCGGATCGACGAGTCGGAGGACCCGAAGACCAAGCAGGGAT
GCTGTTAAATGGCTAACGACGAGTACGATTTTCTCTTCAAAGTTGTCCTG
ATTGGAGACTCTGGTGTTGGAAAGTCCAACCTTTTGAGTCGTTTCACCCG
TAACGAGTTCAACCTGGACTCCAAGTCCACCATCGGTGTCGAGTTCGCTA
CCCGCTCGATCCAGGTCGATTCCAAGACGATCAAGGCTCAGATTTGGGAT
ACTGCTGGTCAGGAACGTTACCGTGCCATCACCTCCGCTTACTATCGGGG
TGCTGTCGGTGCTCTTCTCGTCTACGATATCAGTAAGCACCAGACTTACG
ACAATGTCAACCGGTGGTTGAAGGAACTCCGCGATCATGCCGACTCCAAC
ATCGTTATCATGTTGGTCGGTAACAAGAGTGATTTGAGGCACCTGCGGGC
TGTGCCCACGGAAGAGGCCAAGCAATTCGCAAGCGAGAACAACCTCTCTT
TCATCGAGACATCTGCCCTTGACGCCAGCAACGTCGAGCTTGCTTTCCAG
AACATCCTGACAGAAATCTACCGTATCGTCTCCAGCAAGGCTCTGGATGG
CGGTGATGCCGGCCAGACCGTTCTGGGCGACCGCCGCGACATGGTGCGGA
TCGACGAGTCGGAGGACCCGAAGACCAAGCAGGGATGCTGTTAAATGGCT
AACGACGAGTACGATTTTCTCTTCAAAGTTGTCCTGATTGGAGACTCTGG
TGTTGGAAAGTCCAACCTTTTGAGTCGTTTCACCCGTAACGAGTTCAACC
TGGACTCCAAGTCCACCATCGGTGTCGAGTTCGCTACCCGCTCGATCCAG
GTCGATTCCAAGACGATCAAGGCTCAGATTTGGGATACTGCTGGTCAGGA
ACGTTACCGTGCCATCACCTCCGCTTACTATCGGGGTGCTGTCGGTGCTC
TTCTCGTCTACGATATCAGTAAGCACCAGACTTACGACAATGTCAACCGG
TGGTTGAAGGAACTCCGCGATCATGCCGACTCCAACATCGTTATCATGTT
GGTCGGTAACAAGAGTGATTTGAGGCACCTGCGGGCTGTGCCCACGGAAG
AGGCCAAGCAATTCGCAAGCGAGAACAACCTCTCTTTCATCGAGACATCT
GCCCTTGACGCCAGCAACGTCGAGCTTGCTTTCCAGAACATCCTGACAGA
AATCTACCGTATCGTCTCCAGCAAGGCTCTGGATGGCGGTGATGCCGGCC
AGACCGTTCTGGGCGACCGCCGCGACATGGTGCGGATCGACGAGTCGGAG
GACCCGAAGACCAAGCAGGGATGCTGTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003924 | GTPase activity |
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264HHW |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR001806 |
| DBxref | InterPro:IPR005225 |
| DBxref | PFAM:PF08477 |
| DBxref | PFAM:PF00071 |
| DBxref | PFAM:PF01926 |
| DBxref | PFAM:PF00025 |
| Product | Ras- protein Rab-11A |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:2194892..2195835 + |
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