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CAN33_39820-T1, CAN33_39820-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_39820-T1
Unique NameCAN33_39820-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2256977..2258202+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_39820-T1 ID=CAN33_39820-T1|Name=CAN33_39820-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1226bp|location=Sequence derived from alignment at NKJJ01000017.1:2256977..2258202+ (Aspergillus niger FDAARGOS_311)
ATGGTGAGTTCCCCGCTTAGGCGCCGTTATGTACTGAGGTGTATACATGC
TGATACCCGGATGATGACAGTTTCGTTCTGGATACTGGGATGACGATCCC
ATGAACGGAGTCATGGGTGGTTCCATGTTCCGCCATGGAGCTGCTCGTCG
TTTCGATGAATACTACCGCTGCTATCCTGTCGCCATGATGCCCGGCCCGG
AGAGAGAGAACGTGAACCACGGCGGCAAGGTCATCATGCCGCCCAGCGCT
CTTGACAAGCTTACTCGCCTTCATATTACGTATCCGATGCTGTTCGAGCT
TCACAACGGTGCACGGGAAAGGTTGACGCACGCTGGTGTACTAGAGTTCA
TTGCGGAAGAGGGGAAGATCTATCTACCTTTCTGGGTAATGTGCTTCTCA
TGATAGGTACCCTGCAGGATACTGACTATTTGATCTCCCGCAGCTCATGC
AAACTCTCCTTCTGGAACCCGGTGATCTCGTACAGGTCAAGTCGACCGAT
CTCCCACCCGGCCAATTCATCAAGCTGCAAGCTCAATCTACCTCATTCCT
CGATATAAGTGACCCGAAGGCCGTGCTGGAGAATGCTTTCCGTAACTTCT
CCTGTCTGACCAAGGGAGATGTCTTCACATTTGCATACAACGACCAGGTT
TATGAGATGGCGGTCTTGGAAACCAAGCCATCCACCGACACGAATGCCAT
TTCCGTGCTCGAGACAGATCTAGAAGTGGACTTTGCGCCTCCTGTGGGCT
ATGAGGAGCCTCAACGGCCCAGCGGCACCAGTACTCCTCGTAGTGGAGTA
AGCAACAAGCTGCCCTCTGGTGGGCTGCTTCATCCCCATGGAACCATGGC
ACAGGCGATCAACTACGCTGCTATTGCCCCGGAGTCGACTGATGCTGCGG
CGGGTGCCCGAGCGGTCTCATCGAACTTCCTTAGTGGAGGACAGCGTCTG
AATGCCAAGAAGGGAAGCAAAACATCCACACCAAAACCGTCTACTCCTAC
CCCAGGAACAACGAACCCGCAGCATCCCCCTCCTGTCAGGAAGACCAACG
GCCCGCAACCTCTGCGGTTAGGCCACAACCAGCTATTCTTTGGATATGCA
ATCAAGCCAGTGAAGAAGCGCGACGAGAGCGGACAGGTACTCGAGGACAA
GCCTCGCTTCCAGGGATCTGGTCAAACATTACGAGGAAAGAAGAAAGACG
CAAGTGGCTCGGCAACCCCTACTTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2256977..2258202+

>CAN33_39820-T1 ID=CAN33_39820-T1|Name=CAN33_39820-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3303bp|location=Sequence derived from alignment at NKJJ01000017.1:2256977..2258202+ (Aspergillus niger FDAARGOS_311)
ATGTTTCGTTCTGGATACTGGGATGACGATCCCATGAACGGAGTCATGGG
TGGTTCCATGTTCCGCCATGGAGCTGCTCGTCGTTTCGATGAATACTACC
GCTGCTATCCTGTCGCCATGATGCCCGGCCCGGAGAGAGAGAACGTGAAC
CACGGCGGCAAGGTCATCATGCCGCCCAGCGCTCTTGACAAGCTTACTCG
CCTTCATATTACGTATCCGATGCTGTTCGAGCTTCACAACGGTGCACGGG
AAAGGTTGACGCACGCTGGTGTACTAGAGTTCATTGCGGAAGAGGGGAAG
ATCTATCTACCTTTCTGGCTCATGCAAACTCTCCTTCTGGAACCCGGTGA
TCTCGTACAGGTCAAGTCGACCGATCTCCCACCCGGCCAATTCATCAAGC
TGCAAGCTCAATCTACCTCATTCCTCGATATAAGTGACCCGAAGGCCGTG
CTGGAGAATGCTTTCCGTAACTTCTCCTGTCTGACCAAGGGAGATGTCTT
CACATTTGCATACAACGACCAGGTTTATGAGATGGCGGTCTTGGAAACCA
AGCCATCCACCGACACGAATGCCATTTCCGTGCTCGAGACAGATCTAGAA
GTGGACTTTGCGCCTCCTGTGGGCTATGAGGAGCCTCAACGGCCCAGCGG
CACCAGTACTCCTCGTAGTGGAGTAAGCAACAAGCTGCCCTCTGGTGGGC
TGCTTCATCCCCATGGAACCATGGCACAGGCGATCAACTACGCTGCTATT
GCCCCGGAGTCGACTGATGCTGCGGCGGGTGCCCGAGCGGTCTCATCGAA
CTTCCTTAGTGGAGGACAGCGTCTGAATGCCAAGAAGGGAAGCAAAACAT
CCACACCAAAACCGTCTACTCCTACCCCAGGAACAACGAACCCGCAGCAT
CCCCCTCCTGTCAGGAAGACCAACGGCCCGCAACCTCTGCGGTTAGGCCA
CAACCAGCTATTCTTTGGATATGCAATCAAGCCAGTGAAGAAGCGCGACG
AGAGCGGACAGGTACTCGAGGACAAGCCTCGCTTCCAGGGATCTGGTCAA
ACATTACGAGGAAAGAAGAAAGACGCAAGTGGCTCGGCAACCCCTACTTA
AATGTTTCGTTCTGGATACTGGGATGACGATCCCATGAACGGAGTCATGG
GTGGTTCCATGTTCCGCCATGGAGCTGCTCGTCGTTTCGATGAATACTAC
CGCTGCTATCCTGTCGCCATGATGCCCGGCCCGGAGAGAGAGAACGTGAA
CCACGGCGGCAAGGTCATCATGCCGCCCAGCGCTCTTGACAAGCTTACTC
GCCTTCATATTACGTATCCGATGCTGTTCGAGCTTCACAACGGTGCACGG
GAAAGGTTGACGCACGCTGGTGTACTAGAGTTCATTGCGGAAGAGGGGAA
GATCTATCTACCTTTCTGGCTCATGCAAACTCTCCTTCTGGAACCCGGTG
ATCTCGTACAGGTCAAGTCGACCGATCTCCCACCCGGCCAATTCATCAAG
CTGCAAGCTCAATCTACCTCATTCCTCGATATAAGTGACCCGAAGGCCGT
GCTGGAGAATGCTTTCCGTAACTTCTCCTGTCTGACCAAGGGAGATGTCT
TCACATTTGCATACAACGACCAGGTTTATGAGATGGCGGTCTTGGAAACC
AAGCCATCCACCGACACGAATGCCATTTCCGTGCTCGAGACAGATCTAGA
AGTGGACTTTGCGCCTCCTGTGGGCTATGAGGAGCCTCAACGGCCCAGCG
GCACCAGTACTCCTCGTAGTGGAGTAAGCAACAAGCTGCCCTCTGGTGGG
CTGCTTCATCCCCATGGAACCATGGCACAGGCGATCAACTACGCTGCTAT
TGCCCCGGAGTCGACTGATGCTGCGGCGGGTGCCCGAGCGGTCTCATCGA
ACTTCCTTAGTGGAGGACAGCGTCTGAATGCCAAGAAGGGAAGCAAAACA
TCCACACCAAAACCGTCTACTCCTACCCCAGGAACAACGAACCCGCAGCA
TCCCCCTCCTGTCAGGAAGACCAACGGCCCGCAACCTCTGCGGTTAGGCC
ACAACCAGCTATTCTTTGGATATGCAATCAAGCCAGTGAAGAAGCGCGAC
GAGAGCGGACAGGTACTCGAGGACAAGCCTCGCTTCCAGGGATCTGGTCA
AACATTACGAGGAAAGAAGAAAGACGCAAGTGGCTCGGCAACCCCTACTT
AAATGTTTCGTTCTGGATACTGGGATGACGATCCCATGAACGGAGTCATG
GGTGGTTCCATGTTCCGCCATGGAGCTGCTCGTCGTTTCGATGAATACTA
CCGCTGCTATCCTGTCGCCATGATGCCCGGCCCGGAGAGAGAGAACGTGA
ACCACGGCGGCAAGGTCATCATGCCGCCCAGCGCTCTTGACAAGCTTACT
CGCCTTCATATTACGTATCCGATGCTGTTCGAGCTTCACAACGGTGCACG
GGAAAGGTTGACGCACGCTGGTGTACTAGAGTTCATTGCGGAAGAGGGGA
AGATCTATCTACCTTTCTGGCTCATGCAAACTCTCCTTCTGGAACCCGGT
GATCTCGTACAGGTCAAGTCGACCGATCTCCCACCCGGCCAATTCATCAA
GCTGCAAGCTCAATCTACCTCATTCCTCGATATAAGTGACCCGAAGGCCG
TGCTGGAGAATGCTTTCCGTAACTTCTCCTGTCTGACCAAGGGAGATGTC
TTCACATTTGCATACAACGACCAGGTTTATGAGATGGCGGTCTTGGAAAC
CAAGCCATCCACCGACACGAATGCCATTTCCGTGCTCGAGACAGATCTAG
AAGTGGACTTTGCGCCTCCTGTGGGCTATGAGGAGCCTCAACGGCCCAGC
GGCACCAGTACTCCTCGTAGTGGAGTAAGCAACAAGCTGCCCTCTGGTGG
GCTGCTTCATCCCCATGGAACCATGGCACAGGCGATCAACTACGCTGCTA
TTGCCCCGGAGTCGACTGATGCTGCGGCGGGTGCCCGAGCGGTCTCATCG
AACTTCCTTAGTGGAGGACAGCGTCTGAATGCCAAGAAGGGAAGCAAAAC
ATCCACACCAAAACCGTCTACTCCTACCCCAGGAACAACGAACCCGCAGC
ATCCCCCTCCTGTCAGGAAGACCAACGGCCCGCAACCTCTGCGGTTAGGC
CACAACCAGCTATTCTTTGGATATGCAATCAAGCCAGTGAAGAAGCGCGA
CGAGAGCGGACAGGTACTCGAGGACAAGCCTCGCTTCCAGGGATCTGGTC
AAACATTACGAGGAAAGAAGAAAGACGCAAGTGGCTCGGCAACCCCTACT
TAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_39820CAN33_39820Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39820-T1.exon1CAN33_39820-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_39820-T1.exon2CAN33_39820-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_39820-T1.exon3CAN33_39820-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39820-T1.cdsCAN33_39820-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39820-T1CAN33_39820-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263WLB
DBxrefInterPro:IPR042299
DBxrefInterPro:IPR004854
DBxrefPFAM:PF03152
ProductUbiquitin fusion degradation protein UFD1 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2256977..2258202 +
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