CAN33_39840-T1, CAN33_39840-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview


Name	CAN33_39840-T1
Unique Name	CAN33_39840-T1
Type	mRNA
Organism	Aspergillus niger FDAARGOS_311

Sequences

The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2278770..2280511+
coding sequence from alignment at NKJJ01000017.1:2278770..2280511+

mRNA from alignment at NKJJ01000017.1:2278770..2280511+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CAN33_39840-T1 ID=CAN33_39840-T1|Name=CAN33_39840-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1742bp|location=Sequence derived from alignment at NKJJ01000017.1:2278770..2280511+ (Aspergillus niger FDAARGOS_311)
ATGGCCTTGTCGAGAGCTCCAGACCAGACAGCTTGCCAGTCTTCTCGGCG
TATGTTTTCTCCCCCAGATCCTCCGAATTCCTTTCAATAACCCCGAATAA
ATAATTAACATATAAACGCGACCGACTAGCCTAGAATTTCCAGCCCATCC
ACATTAGTTGTACACGGAATATCCGCAACTTGCAAAACGACTATCGTCCG
CAATGTCCTCGCTGCCCTCGAAGTCCCACATGCTATTGTCCGGAGTCCGG
AATGCATCACCGGCCGTCATCTCCTAACGAAGATCCTCTGGGCAACGCTT
GAAGCGCTTGGGAAACGCGACGAATGGGAGAAATACGGCAAGGGAAGGTG
CGAGCATGTTAGCTCCCTGGCTGTGCTGCTGGGCGAATGTCTTGCCTCAT
TATCGGACGGCAGCAGTAATGACAAGGGCAAGTTCGTGCTGGTTTTGGAT
GGGATAGATAAGCAGCGTGAAGCACCGCATACTCTGTTGTCTGCGCTGGC
GAGGCTGGGAGAAGTGGTATGTTTTTGCCCCGTTCGTTTTCTTGGTGAGA
GCCCTTGCTAATGGGTTGATTGTTTACTGCGCAGATTCCATCCCTATGTG
TCGTCCTTATCCTCAGCTCCAGTCCGCGGCCGCTGTTTCTTCAAGCTGCG
GGCGTTCCGCATATTAGCTTCCCTCCGTATACGCGCAAAGAGGCCGTCAC
GATTATCTTGAACGCTGGACCGCCTGCTGTGAGTGGTCTGGATGACGAGA
CAGCTTCGAGATTATACCCGCATTTTGTGTCCGCTATATATGACTCTCTG
GTTGGGCCTACGGCGAGTTCTATTCCTACGTTCAGATCGATATGCGAGAA
GATATGGCCTCAGTTCGTTGCTCCCATCACCAACGGCGATATCCCGCCTG
GGGGAAGCAATGAATGGGACTTCTCGCGACTTCTGGTCAAAAACCGTGCT
TTATTCCGCCATCAAGGCGAAGGCGCTCTTGTACATCACATTGTCACCGA
AGAATCAGCTCCCGCAAATGGCTCCCTATCGAAGCCGTCAATGTCGGCCG
TCTCGGCCCCTTCACCCCTTCCTTCTTTACCTTACTTCCCGACCTTGATC
TTGACCTCCGCATACCTTGCATCACATACACCCCAACGGCTCGATACCAT
CTTCTTCTCGAAATTCTCTTCCTCTTCCTTATCTGCTCGGAATAAACGCG
CACATCATCGGCGACGGTTGAAGGTGCTTTCCCGAGCCCAGGCGGAGGAT
AGTCGGGAGGCGAGCCGAGGCCCGTCAACCCCTAGCAAGAAAGGCAAAAG
AGAGAAGACTCGCATCACGAAATCCACTCTGGAGTCTGCCTTTGCTACTT
CCTCTGCCACTACTTCGGCTGTGGGCAGCAACGCCGGTATCACCGGTCCG
TCAACGATCCTAACAGCCCGTCCTTTCCCGCTCGAGCGACTGATCGCTAT
CTACCACGCCATTGACCCCAATCCCCCAGCAAACCCCATCCGATTGGCGG
CGGTTTCCGATGCGATATACGCCGAGCTTGCTACATTACGTCGGTTACGA
CTCGTGGTGCCAGCGGCAGGTCGCGAGAGCGGCGGTCGCATGGGGCTCGG
GTCCGGAGGGTTAAGTAGCGGTAACACGACCTCGGATGCTGGTGAGAAAT
GGTGCGTCAATGTCTCGGGCGACTGGATCGGAGAGTTGGCCAAGACAGTA
GGCGTCGAGGTTGGCGAATGGTTGGCGGGAGGGTTGGATTAA

Coding sequence (CDS) from alignment at NKJJ01000017.1:2278770..2280511+

>CAN33_39840-T1 ID=CAN33_39840-T1|Name=CAN33_39840-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4698bp|location=Sequence derived from alignment at NKJJ01000017.1:2278770..2280511+ (Aspergillus niger FDAARGOS_311)
ATGGCCTTGTCGAGAGCTCCAGACCAGACAGCTTGCCAGTCTTCTCGGCT
TGTACACGGAATATCCGCAACTTGCAAAACGACTATCGTCCGCAATGTCC
TCGCTGCCCTCGAAGTCCCACATGCTATTGTCCGGAGTCCGGAATGCATC
ACCGGCCGTCATCTCCTAACGAAGATCCTCTGGGCAACGCTTGAAGCGCT
TGGGAAACGCGACGAATGGGAGAAATACGGCAAGGGAAGGTGCGAGCATG
TTAGCTCCCTGGCTGTGCTGCTGGGCGAATGTCTTGCCTCATTATCGGAC
GGCAGCAGTAATGACAAGGGCAAGTTCGTGCTGGTTTTGGATGGGATAGA
TAAGCAGCGTGAAGCACCGCATACTCTGTTGTCTGCGCTGGCGAGGCTGG
GAGAAGTGATTCCATCCCTATGTGTCGTCCTTATCCTCAGCTCCAGTCCG
CGGCCGCTGTTTCTTCAAGCTGCGGGCGTTCCGCATATTAGCTTCCCTCC
GTATACGCGCAAAGAGGCCGTCACGATTATCTTGAACGCTGGACCGCCTG
CTGTGAGTGGTCTGGATGACGAGACAGCTTCGAGATTATACCCGCATTTT
GTGTCCGCTATATATGACTCTCTGGTTGGGCCTACGGCGAGTTCTATTCC
TACGTTCAGATCGATATGCGAGAAGATATGGCCTCAGTTCGTTGCTCCCA
TCACCAACGGCGATATCCCGCCTGGGGGAAGCAATGAATGGGACTTCTCG
CGACTTCTGGTCAAAAACCGTGCTTTATTCCGCCATCAAGGCGAAGGCGC
TCTTGTACATCACATTGTCACCGAAGAATCAGCTCCCGCAAATGGCTCCC
TATCGAAGCCGTCAATGTCGGCCGTCTCGGCCCCTTCACCCCTTCCTTCT
TTACCTTACTTCCCGACCTTGATCTTGACCTCCGCATACCTTGCATCACA
TACACCCCAACGGCTCGATACCATCTTCTTCTCGAAATTCTCTTCCTCTT
CCTTATCTGCTCGGAATAAACGCGCACATCATCGGCGACGGTTGAAGGTG
CTTTCCCGAGCCCAGGCGGAGGATAGTCGGGAGGCGAGCCGAGGCCCGTC
AACCCCTAGCAAGAAAGGCAAAAGAGAGAAGACTCGCATCACGAAATCCA
CTCTGGAGTCTGCCTTTGCTACTTCCTCTGCCACTACTTCGGCTGTGGGC
AGCAACGCCGGTATCACCGGTCCGTCAACGATCCTAACAGCCCGTCCTTT
CCCGCTCGAGCGACTGATCGCTATCTACCACGCCATTGACCCCAATCCCC
CAGCAAACCCCATCCGATTGGCGGCGGTTTCCGATGCGATATACGCCGAG
CTTGCTACATTACGTCGGTTACGACTCGTGGTGCCAGCGGCAGGTCGCGA
GAGCGGCGGTCGCATGGGGCTCGGGTCCGGAGGGTTAAGTAGCGGTAACA
CGACCTCGGATGCTGGTGAGAAATGGTGCGTCAATGTCTCGGGCGACTGG
ATCGGAGAGTTGGCCAAGACAGTAGGCGTCGAGGTTGGCGAATGGTTGGC
GGGAGGGTTGGATTAAATGGCCTTGTCGAGAGCTCCAGACCAGACAGCTT
GCCAGTCTTCTCGGCTTGTACACGGAATATCCGCAACTTGCAAAACGACT
ATCGTCCGCAATGTCCTCGCTGCCCTCGAAGTCCCACATGCTATTGTCCG
GAGTCCGGAATGCATCACCGGCCGTCATCTCCTAACGAAGATCCTCTGGG
CAACGCTTGAAGCGCTTGGGAAACGCGACGAATGGGAGAAATACGGCAAG
GGAAGGTGCGAGCATGTTAGCTCCCTGGCTGTGCTGCTGGGCGAATGTCT
TGCCTCATTATCGGACGGCAGCAGTAATGACAAGGGCAAGTTCGTGCTGG
TTTTGGATGGGATAGATAAGCAGCGTGAAGCACCGCATACTCTGTTGTCT
GCGCTGGCGAGGCTGGGAGAAGTGATTCCATCCCTATGTGTCGTCCTTAT
CCTCAGCTCCAGTCCGCGGCCGCTGTTTCTTCAAGCTGCGGGCGTTCCGC
ATATTAGCTTCCCTCCGTATACGCGCAAAGAGGCCGTCACGATTATCTTG
AACGCTGGACCGCCTGCTGTGAGTGGTCTGGATGACGAGACAGCTTCGAG
ATTATACCCGCATTTTGTGTCCGCTATATATGACTCTCTGGTTGGGCCTA
CGGCGAGTTCTATTCCTACGTTCAGATCGATATGCGAGAAGATATGGCCT
CAGTTCGTTGCTCCCATCACCAACGGCGATATCCCGCCTGGGGGAAGCAA
TGAATGGGACTTCTCGCGACTTCTGGTCAAAAACCGTGCTTTATTCCGCC
ATCAAGGCGAAGGCGCTCTTGTACATCACATTGTCACCGAAGAATCAGCT
CCCGCAAATGGCTCCCTATCGAAGCCGTCAATGTCGGCCGTCTCGGCCCC
TTCACCCCTTCCTTCTTTACCTTACTTCCCGACCTTGATCTTGACCTCCG
CATACCTTGCATCACATACACCCCAACGGCTCGATACCATCTTCTTCTCG
AAATTCTCTTCCTCTTCCTTATCTGCTCGGAATAAACGCGCACATCATCG
GCGACGGTTGAAGGTGCTTTCCCGAGCCCAGGCGGAGGATAGTCGGGAGG
CGAGCCGAGGCCCGTCAACCCCTAGCAAGAAAGGCAAAAGAGAGAAGACT
CGCATCACGAAATCCACTCTGGAGTCTGCCTTTGCTACTTCCTCTGCCAC
TACTTCGGCTGTGGGCAGCAACGCCGGTATCACCGGTCCGTCAACGATCC
TAACAGCCCGTCCTTTCCCGCTCGAGCGACTGATCGCTATCTACCACGCC
ATTGACCCCAATCCCCCAGCAAACCCCATCCGATTGGCGGCGGTTTCCGA
TGCGATATACGCCGAGCTTGCTACATTACGTCGGTTACGACTCGTGGTGC
CAGCGGCAGGTCGCGAGAGCGGCGGTCGCATGGGGCTCGGGTCCGGAGGG
TTAAGTAGCGGTAACACGACCTCGGATGCTGGTGAGAAATGGTGCGTCAA
TGTCTCGGGCGACTGGATCGGAGAGTTGGCCAAGACAGTAGGCGTCGAGG
TTGGCGAATGGTTGGCGGGAGGGTTGGATTAAATGGCCTTGTCGAGAGCT
CCAGACCAGACAGCTTGCCAGTCTTCTCGGCTTGTACACGGAATATCCGC
AACTTGCAAAACGACTATCGTCCGCAATGTCCTCGCTGCCCTCGAAGTCC
CACATGCTATTGTCCGGAGTCCGGAATGCATCACCGGCCGTCATCTCCTA
ACGAAGATCCTCTGGGCAACGCTTGAAGCGCTTGGGAAACGCGACGAATG
GGAGAAATACGGCAAGGGAAGGTGCGAGCATGTTAGCTCCCTGGCTGTGC
TGCTGGGCGAATGTCTTGCCTCATTATCGGACGGCAGCAGTAATGACAAG
GGCAAGTTCGTGCTGGTTTTGGATGGGATAGATAAGCAGCGTGAAGCACC
GCATACTCTGTTGTCTGCGCTGGCGAGGCTGGGAGAAGTGATTCCATCCC
TATGTGTCGTCCTTATCCTCAGCTCCAGTCCGCGGCCGCTGTTTCTTCAA
GCTGCGGGCGTTCCGCATATTAGCTTCCCTCCGTATACGCGCAAAGAGGC
CGTCACGATTATCTTGAACGCTGGACCGCCTGCTGTGAGTGGTCTGGATG
ACGAGACAGCTTCGAGATTATACCCGCATTTTGTGTCCGCTATATATGAC
TCTCTGGTTGGGCCTACGGCGAGTTCTATTCCTACGTTCAGATCGATATG
CGAGAAGATATGGCCTCAGTTCGTTGCTCCCATCACCAACGGCGATATCC
CGCCTGGGGGAAGCAATGAATGGGACTTCTCGCGACTTCTGGTCAAAAAC
CGTGCTTTATTCCGCCATCAAGGCGAAGGCGCTCTTGTACATCACATTGT
CACCGAAGAATCAGCTCCCGCAAATGGCTCCCTATCGAAGCCGTCAATGT
CGGCCGTCTCGGCCCCTTCACCCCTTCCTTCTTTACCTTACTTCCCGACC
TTGATCTTGACCTCCGCATACCTTGCATCACATACACCCCAACGGCTCGA
TACCATCTTCTTCTCGAAATTCTCTTCCTCTTCCTTATCTGCTCGGAATA
AACGCGCACATCATCGGCGACGGTTGAAGGTGCTTTCCCGAGCCCAGGCG
GAGGATAGTCGGGAGGCGAGCCGAGGCCCGTCAACCCCTAGCAAGAAAGG
CAAAAGAGAGAAGACTCGCATCACGAAATCCACTCTGGAGTCTGCCTTTG
CTACTTCCTCTGCCACTACTTCGGCTGTGGGCAGCAACGCCGGTATCACC
GGTCCGTCAACGATCCTAACAGCCCGTCCTTTCCCGCTCGAGCGACTGAT
CGCTATCTACCACGCCATTGACCCCAATCCCCCAGCAAACCCCATCCGAT
TGGCGGCGGTTTCCGATGCGATATACGCCGAGCTTGCTACATTACGTCGG
TTACGACTCGTGGTGCCAGCGGCAGGTCGCGAGAGCGGCGGTCGCATGGG
GCTCGGGTCCGGAGGGTTAAGTAGCGGTAACACGACCTCGGATGCTGGTG
AGAAATGGTGCGTCAATGTCTCGGGCGACTGGATCGGAGAGTTGGCCAAG
ACAGTAGGCGTCGAGGTTGGCGAATGGTTGGCGGGAGGGTTGGATTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0000808	origin recognition complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006260	DNA replication

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CAN33_39840	CAN33_39840	Aspergillus niger FDAARGOS_311	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_39840-T1.exon1	CAN33_39840-T1.exon1	Aspergillus niger FDAARGOS_311	exon
CAN33_39840-T1.exon2	CAN33_39840-T1.exon2	Aspergillus niger FDAARGOS_311	exon
CAN33_39840-T1.exon3	CAN33_39840-T1.exon3	Aspergillus niger FDAARGOS_311	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_39840-T1.cds	CAN33_39840-T1.cds	Aspergillus niger FDAARGOS_311	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_39840-T1	CAN33_39840-T1-protein	Aspergillus niger FDAARGOS_311	polypeptide

Properties


Property Name	Value
DBxref	InterPro:IPR027417
DBxref	InterPro:IPR020796
DBxref	InterPro:IPR041664
DBxref	PFAM:PF14630
DBxref	PFAM:PF13191
Product	AAA ATPase domain family protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger FDAARGOS_311 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NKJJ01000017.1	supercontig	NKJJ01000017.1:2278770..2280511 +

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CAN33_39840-T1, CAN33_39840-T1 (mRNA) Aspergillus niger FDAARGOS_311