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CAN33_39885-T1, CAN33_39885-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_39885-T1
Unique NameCAN33_39885-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2310428..2312132-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_39885-T1 ID=CAN33_39885-T1|Name=CAN33_39885-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1705bp|location=Sequence derived from alignment at NKJJ01000017.1:2310428..2312132- (Aspergillus niger FDAARGOS_311)
ATGTCTATGATTACCACTTCCGCTTGGGTGCGGCGCGGAGTCGCTGCTCA
GTTCCCTACGAAATATGAGATCAATGAGGAGGAAATGGATCGCATATCGA
AGCTTGCGCGCATGCAGCTTGAAGAGGCGCAGGGTGATTTGAAGGCTGCG
CAGGAGGATGAGGAGATGGAGGAGGATAAGAAGGAGGGTGCGGATGATGC
TATGGAGGATGATTCCAAGGAAGAGGAGGAGGAGGAGAAGAAGAAGAAGG
AGGGTGCTGCAGAGTGAGTTGTCCCGTTGTATACCATTGGGTTTGGTTCG
CGTCGGGCAATGAGGGACGAATGCTAACATATTTGATGATGAAAGTGACG
ACGACGACCTGAAGGAATACGATCTGGATCACTACGATAGCGACGAGGTC
GACGAGGACGGCGAGAAGATCACCATGTTCGGCAATGTCAAGTCGCTCGC
TTATCACCAGCCCAACGAGGAGGACCCGTACCTGGTTATGCCGCCGGAGG
AGGAAGACGAGGAGAGAGAGGAACTGCAGATTATGCCGACGGATAACCTG
CTGTTGGCGGGTAAGGTTGAGGACGAGGTTGCTCATCTGGAAGTCTACGT
CTACGAGGATGCCGCCGACAACCTTTACGTGCACCACGATATCATGCTGC
CCGCTATTCCGTTGGCGCTAGAGTGGTTGGACATCCCCGTTGGCAAGACG
GCCGAGGGCCGCACTACCGGTAACTTCGTGGCTATCGGAACAATGGAACC
CGACATTGAGATCTGGGACCTCGATGTCGTCGACAGCATGTACCCCAACG
CGATCCTGGGCCAGGGTGGTGCCGATGCCGAGAACGGCGCGAAGAAGTCC
AAGAAGAAGAAGGCCAAGGCCAACGACGAATATCACATCGACTCGATCCT
CGCTCTGGCTGCGAACCGCCAGCACCGCAACCTCCTGGCCTCTGGATCTG
CCGACCGCACCGTCAAGCTCTGGGATCTCCAGACCACCAAGTGCGCCAAG
TCGTACTCCCACCACACCGACAAGGTGTGCGCGCTGGAGTGGCACCCGAC
CGAATCGACCGTCCTGCTGAGCGGTAGCTACGACCGCACGGTGGTGGCAG
CGGACATGAGAGCCCCCGACTCCAAGGCGCGCTGGGGCGTGGATGCGGAT
GTCGAGAACGTGCGCTGGGACGTGCACGACCCGAACTACTTCTACGTGAC
GACGGACGCCGGTATGGTGTACCGCTACGATGTGCGGAACATTCCCGCCT
CGCCCAAGGAGTCCAAGCCCGTGTGGACGCTGCAGGCGCACGACTCGTCG
GTGTCGTCGTTCGACGTCAACCCCACCGTGCCGGGCTACCTGGTGACCGG
GTCAACGGACAAGTCCGTTAAGCTCTGGAACATTGAGAACGACAAGCCCA
GCATGGTGGTGTCTCGCAAGATGGAAGTGGGCAAGATCTTCTCGACCACT
TTCGCGCCGGATGCTGATGTGAGCTTCCGCCTGGCTGTGGCGGGCAGCAA
GGGCGTGGTCCAGATCTGGGATACCTCCACTAACGCGGCGGTGCGTCGGG
CGTTCGTCTCGCGGGTGCCTACCCTGGAGGGCGAGGTGCAGGAACGTCTG
GTCGGTATTCAGCCCGACCAGGATGAGTCGGATGAGGAGGAAGGCGTGCA
GGAGGTTGGAGCGGCGCAAGGTGCGGATGGCTGGGAATCGATGGATGAGG
ATTGA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2310428..2312132-

>CAN33_39885-T1 ID=CAN33_39885-T1|Name=CAN33_39885-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2820bp|location=Sequence derived from alignment at NKJJ01000017.1:2310428..2312132- (Aspergillus niger FDAARGOS_311)
TGACGACGACGACCTGAAGGAATACGATCTGGATCACTACGATAGCGACG
AGGTCGACGAGGACGGCGAGAAGATCACCATGTTCGGCAATGTCAAGTCG
CTCGCTTATCACCAGCCCAACGAGGAGGACCCGTACCTGGTTATGCCGCC
GGAGGAGGAAGACGAGGAGAGAGAGGAACTGCAGATTATGCCGACGGATA
ACCTGCTGTTGGCGGGTAAGGTTGAGGACGAGGTTGCTCATCTGGAAGTC
TACGTCTACGAGGATGCCGCCGACAACCTTTACGTGCACCACGATATCAT
GCTGCCCGCTATTCCGTTGGCGCTAGAGTGGTTGGACATCCCCGTTGGCA
AGACGGCCGAGGGCCGCACTACCGGTAACTTCGTGGCTATCGGAACAATG
GAACCCGACATTGAGATCTGGGACCTCGATGTCGTCGACAGCATGTACCC
CAACGCGATCCTGGGCCAGGGTGGTGCCGATGCCGAGAACGGCGCGAAGA
AGTCCAAGAAGAAGAAGGCCAAGGCCAACGACGAATATCACATCGACTCG
ATCCTCGCTCTGGCTGCGAACCGCCAGCACCGCAACCTCCTGGCCTCTGG
ATCTGCCGACCGCACCGTCAAGCTCTGGGATCTCCAGACCACCAAGTGCG
CCAAGTCGTACTCCCACCACACCGACAAGGTGTGCGCGCTGGAGTGGCAC
CCGACCGAATCGACCGTCCTGCTGAGCGGTAGCTACGACCGCACGGTGGT
GGCAGCGGACATGAGAGCCCCCGACTCCAAGGCGCGCTGGGGCGTGGATG
CGGATGTCGAGAACGTGCGCTGGGACGTGCACGACCCGAACTACTTCTAC
GTGACGACGGACGCCGGTATGGTGTACCGCTACGATGTGCGGAACATTCC
CGCCTCGCCCAAGGAGTCCAAGCCCGTGTGGACGCTGCAGGCGCACGACT
CGTCGGTGTCGTCGTTCGACGTCAACCCCACCGTGCCGGGCTACCTGGTG
ACCGGGTCAACGGACAAGTCCGTTAAGCTCTGGAACATTGAGAACGACAA
GCCCAGCATGGTGGTGTCTCGCAAGATGGAAGTGGGCAAGATCTTCTCGA
CCACTTTCGCGCCGGATGCTGATGTGAGCTTCCGCCTGGCTGTGGCGGGC
AGCAAGGGCGTGGTCCAGATCTGGGATACCTCCACTAACGCGGCGGTGCG
TCGGGCGTTCGTCTCGCGGGTGCCTACCCTGGAGGGCGAGGTGCAGGAAC
GTCTGGTCGGTATTCAGCCCGACCAGGATGAGTCGGATGAGGAGGAAGGC
GTGCAGGAGGTTGGAGCGGCGCAAGGTGCGGATGGCTGGGAATCGATGGA
TGAGGATTGAATGTCTATGATTACCACTTCCGCTTGGGTGCGGCGCGGAG
TCGCTGCTCATGACGACGACGACCTGAAGGAATACGATCTGGATCACTAC
GATAGCGACGAGGTCGACGAGGACGGCGAGAAGATCACCATGTTCGGCAA
TGTCAAGTCGCTCGCTTATCACCAGCCCAACGAGGAGGACCCGTACCTGG
TTATGCCGCCGGAGGAGGAAGACGAGGAGAGAGAGGAACTGCAGATTATG
CCGACGGATAACCTGCTGTTGGCGGGTAAGGTTGAGGACGAGGTTGCTCA
TCTGGAAGTCTACGTCTACGAGGATGCCGCCGACAACCTTTACGTGCACC
ACGATATCATGCTGCCCGCTATTCCGTTGGCGCTAGAGTGGTTGGACATC
CCCGTTGGCAAGACGGCCGAGGGCCGCACTACCGGTAACTTCGTGGCTAT
CGGAACAATGGAACCCGACATTGAGATCTGGGACCTCGATGTCGTCGACA
GCATGTACCCCAACGCGATCCTGGGCCAGGGTGGTGCCGATGCCGAGAAC
GGCGCGAAGAAGTCCAAGAAGAAGAAGGCCAAGGCCAACGACGAATATCA
CATCGACTCGATCCTCGCTCTGGCTGCGAACCGCCAGCACCGCAACCTCC
TGGCCTCTGGATCTGCCGACCGCACCGTCAAGCTCTGGGATCTCCAGACC
ACCAAGTGCGCCAAGTCGTACTCCCACCACACCGACAAGGTGTGCGCGCT
GGAGTGGCACCCGACCGAATCGACCGTCCTGCTGAGCGGTAGCTACGACC
GCACGGTGGTGGCAGCGGACATGAGAGCCCCCGACTCCAAGGCGCGCTGG
GGCGTGGATGCGGATGTCGAGAACGTGCGCTGGGACGTGCACGACCCGAA
CTACTTCTACGTGACGACGGACGCCGGTATGGTGTACCGCTACGATGTGC
GGAACATTCCCGCCTCGCCCAAGGAGTCCAAGCCCGTGTGGACGCTGCAG
GCGCACGACTCGTCGGTGTCGTCGTTCGACGTCAACCCCACCGTGCCGGG
CTACCTGGTGACCGGGTCAACGGACAAGTCCGTTAAGCTCTGGAACATTG
AGAACGACAAGCCCAGCATGGTGGTGTCTCGCAAGATGGAAGTGGGCAAG
ATCTTCTCGACCACTTTCGCGCCGGATGCTGATGTGAGCTTCCGCCTGGC
TGTGGCGGGCAGCAAGGGCGTGGTCCAGATCTGGGATACCTCCACTAACG
CGGCGGTGCGTCGGGCGTTCGTCTCGCGGGTGCCTACCCTGGAGGGCGAG
GTGCAGGAACGTCTGGTCGGTATTCAGCCCGACCAGGATGAGTCGGATGA
GGAGGAAGGCGTGCAGGAGGTTGGAGCGGCGCAAGGTGCGGATGGCTGGG
AATCGATGGATGAGGATTGAATGTCTATGATTACCACTTCCGCTTGGGTG
CGGCGCGGAGTCGCTGCTCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_39885CAN33_39885Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39885-T1CAN33_39885-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39885-T1.cdsCAN33_39885-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39885-T1.exon2CAN33_39885-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_39885-T1.exon1CAN33_39885-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
ProductWD domain G-beta repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2310428..2312132 -
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