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CAN33_39890-T1, CAN33_39890-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_39890-T1
Unique NameCAN33_39890-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2312452..2312957+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_39890-T1 ID=CAN33_39890-T1|Name=CAN33_39890-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=506bp|location=Sequence derived from alignment at NKJJ01000017.1:2312452..2312957+ (Aspergillus niger FDAARGOS_311)
ATGCGGATCATCTTGCAGTTGAACTTGGTGTATATACAACGTCAATTGAC
ATCTTCATACAATCCCACTCAGCATAATATACTATTAAAGGACAGTCACG
ATGCATTCCCATCTCCATACCCCTACAACGCAAGTACGTCACTCCCCCCC
CCTCCAAAATCTCTCCACCACTAACATCATATCACATCATACCATACTAA
GCACTCAACTAACTTTCTCTCTCAACAGACTGCGAAGAAATCATGACCGC
CCTCGACGAATGCCACGCACGAGGCTTCATTCACAAAGCTCTGGGCGGAT
GCAACGATGTCAAGCGCGACGTGAACAAATGTCTAGCGGCGGAGCGGTAT
GCGCGCGCTAAGCGCAACCGGGATGAGGCGAAGGAGAAGCGCAAGAAGAT
TGAGCGTATTTGGGCTGAAGAGAAGGCGCTTGCGGAGACGGGGTCGATTT
CTTCGTTGGCTTCTTCTGCTTCGACTTCTTCGGGTTCAAGTGCGGCGGAG
AAATAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2312452..2312957+

>CAN33_39890-T1 ID=CAN33_39890-T1|Name=CAN33_39890-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=822bp|location=Sequence derived from alignment at NKJJ01000017.1:2312452..2312957+ (Aspergillus niger FDAARGOS_311)
ATGCGGATCATCTTGCAGTTGAACTTGGTGTATATACAACGTCAATTGAC
ATCTTCATACAATCCCACTCAGCATAATATACTATTAAAGGACAGTCACG
ATGCATTCCCATCTCCATACCCCTACAACGCAAACTGCGAAGAAATCATG
ACCGCCCTCGACGAATGCCACGCACGAGGCTTCATTCACAAAGCTCTGGG
CGGATGCAACGATGTCAAGCGCGACGTGAACAAATGTCTAGCGGCGGAGC
GGTATGCGCGCGCTAAGCGCAACCGGGATGAGGCGAAGGAGAAGCGCAAG
AAGATTGAGCGTATTTGGGCTGAAGAGAAGGCGCTTGCGGAGACGGGGTC
GATTTCTTCGTTGGCTTCTTCTGCTTCGACTTCTTCGGGTTCAAGTGCGG
CGGAGAAATAAATGCGGATCATCTTGCAGTTGAACTTGGTGTATATACAA
CGTCAATTGACATCTTCATACAATCCCACTCAGCATAATATACTATTAAA
GGACAGTCACGATGCATTCCCATCTCCATACCCCTACAACGCAAACTGCG
AAGAAATCATGACCGCCCTCGACGAATGCCACGCACGAGGCTTCATTCAC
AAAGCTCTGGGCGGATGCAACGATGTCAAGCGCGACGTGAACAAATGTCT
AGCGGCGGAGCGGTATGCGCGCGCTAAGCGCAACCGGGATGAGGCGAAGG
AGAAGCGCAAGAAGATTGAGCGTATTTGGGCTGAAGAGAAGGCGCTTGCG
GAGACGGGGTCGATTTCTTCGTTGGCTTCTTCTGCTTCGACTTCTTCGGG
TTCAAGTGCGGCGGAGAAATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_39890CAN33_39890Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39890-T1.exon1CAN33_39890-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_39890-T1.exon2CAN33_39890-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39890-T1.cdsCAN33_39890-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39890-T1CAN33_39890-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013892
DBxrefPFAM:PF08583
ProductCytochrome c oxidase biogenesis protein Cmc1 like family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2312452..2312957 +
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