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CAN33_39910-T1, CAN33_39910-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_39910-T1
Unique NameCAN33_39910-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2323469..2324663-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_39910-T1 ID=CAN33_39910-T1|Name=CAN33_39910-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1195bp|location=Sequence derived from alignment at NKJJ01000017.1:2323469..2324663- (Aspergillus niger FDAARGOS_311)
ATGCTTTTGCTAGACTATCACAACGTTCTCATCCACTCCCTCCTGACGGA
GCGGTTCTCTGGGTACAGCTTCCCCCCCGCCTCCGGTATACGCCAGGCTA
CCAGCTAACAGCTCCATTCATGCTTCCTTCAGAACCCCGCCCGTATCAAT
CGATCAGATCGTTTCCGACTTTGACGGAGTGACCTTTCATCTGTCTACGC
CAGAATCCAAAACCAAGATCCTCATCTCCATCAACGTGAAATGCTTCCGG
GAGCTTGTCCAGTACGGCGCCCAGGAGGTGCTGGAAAGGGAATACGGCCC
CTACATTGTCACCCCAGAGCCCGGCTATGACTTCTCCGTCCTGATCGATC
TAGAGAACCTGCCCGCCGAGCAAGAGGCGAAGGATGAACTCATCATGCGC
CTGGCGCTGATGAAGCGCAACGCCATGGCCGCCCCCTTCGAGAGAGCATT
CGATGAATTCGCCAAGTTAGCCGAAGAGGCTTCGAGATACACAAGCGAGA
CTGCGCCCCAGGGAGTTAAGGAGGGAGGAGAGGTTATGGCCATTCACTAT
CGAGAGGAGGAAGCGATTTATATCAAGGCCAGCCATGATCGTGTCACGGT
GATCTTCAGCACAGTGTTCCGGGAGGAGACAGATCGCATCTTTGGCAAGG
TGTTCCTGCAGGAATTCGTCGATGCCAGACGCCGTGTCCTCACCCTGCAA
AATGCTCCCCAGGTACTCTTCCGAAACGACTGTCCTCTGGAGCTGGCCGG
TGTGCCTGGCCTTCAGAACGGTAATGACGGTAGAATCAGCTACGTCACTT
TCGGTATGTATTCGTTGTTATGCATCACCCACCGTTCGCAGTCACTAACC
GCTTCTAGTCTTGTTCCCTCGTCACCTAACCCCCAGAGACGCTATGAGAA
CATCTCCCACATCCAGATATTCCGTGATTACTTCCATTACCACATCAAAG
CATCCAAGGTAGCTTTATATGTCATAATGCAGGCCAGTTCAATATGCTTA
CTAAGTCTCCAGGCATACATCCACACTAGGATGCGCAAGAGGACCGCAGA
CTTCCTTCAAGGTAAGAAGCGACCCCTAACAATTGTGGTATGTCCAGTTC
ACTAATGAATGATAGTTCTCAACCGGGCGCGGCCCGAGAACGAGGAGCGA
GAAAGGAAGACGGCCAGTGGCCGTACTTTCAGGGTTCAGGGATAG
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2323469..2324663-

>CAN33_39910-T1 ID=CAN33_39910-T1|Name=CAN33_39910-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4830bp|location=Sequence derived from alignment at NKJJ01000017.1:2323469..2324663- (Aspergillus niger FDAARGOS_311)
TTCTCAACCGGGCGCGGCCCGAGAACGAGGAGCGAGAAAGGAAGACGGCC
AGTGGCCGTACTTTCAGGGTTCAGGGATAGGCATACATCCACACTAGGAT
GCGCAAGAGGACCGCAGACTTCCTTCAAGTCTTGTTCCCTCGTCACCTAA
CCCCCAGAGACGCTATGAGAACATCTCCCACATCCAGATATTCCGTGATT
ACTTCCATTACCACATCAAAGCATCCAAGAACCCCGCCCGTATCAATCGA
TCAGATCGTTTCCGACTTTGACGGAGTGACCTTTCATCTGTCTACGCCAG
AATCCAAAACCAAGATCCTCATCTCCATCAACGTGAAATGCTTCCGGGAG
CTTGTCCAGTACGGCGCCCAGGAGGTGCTGGAAAGGGAATACGGCCCCTA
CATTGTCACCCCAGAGCCCGGCTATGACTTCTCCGTCCTGATCGATCTAG
AGAACCTGCCCGCCGAGCAAGAGGCGAAGGATGAACTCATCATGCGCCTG
GCGCTGATGAAGCGCAACGCCATGGCCGCCCCCTTCGAGAGAGCATTCGA
TGAATTCGCCAAGTTAGCCGAAGAGGCTTCGAGATACACAAGCGAGACTG
CGCCCCAGGGAGTTAAGGAGGGAGGAGAGGTTATGGCCATTCACTATCGA
GAGGAGGAAGCGATTTATATCAAGGCCAGCCATGATCGTGTCACGGTGAT
CTTCAGCACAGTGTTCCGGGAGGAGACAGATCGCATCTTTGGCAAGGTGT
TCCTGCAGGAATTCGTCGATGCCAGACGCCGTGTCCTCACCCTGCAAAAT
GCTCCCCAGGTACTCTTCCGAAACGACTGTCCTCTGGAGCTGGCCGGTGT
GCCTGGCCTTCAGAACGGTAATGACGGTAGAATCAGCTACGTCACTTTCG
GTATATGCTTTTGCTAGACTATCACAACGTTCTCATCCACTCCCTCCTGA
CGGAGCGGTTCTCTGGTTCTCAACCGGGCGCGGCCCGAGAACGAGGAGCG
AGAAAGGAAGACGGCCAGTGGCCGTACTTTCAGGGTTCAGGGATAGGCAT
ACATCCACACTAGGATGCGCAAGAGGACCGCAGACTTCCTTCAAGTCTTG
TTCCCTCGTCACCTAACCCCCAGAGACGCTATGAGAACATCTCCCACATC
CAGATATTCCGTGATTACTTCCATTACCACATCAAAGCATCCAAGAACCC
CGCCCGTATCAATCGATCAGATCGTTTCCGACTTTGACGGAGTGACCTTT
CATCTGTCTACGCCAGAATCCAAAACCAAGATCCTCATCTCCATCAACGT
GAAATGCTTCCGGGAGCTTGTCCAGTACGGCGCCCAGGAGGTGCTGGAAA
GGGAATACGGCCCCTACATTGTCACCCCAGAGCCCGGCTATGACTTCTCC
GTCCTGATCGATCTAGAGAACCTGCCCGCCGAGCAAGAGGCGAAGGATGA
ACTCATCATGCGCCTGGCGCTGATGAAGCGCAACGCCATGGCCGCCCCCT
TCGAGAGAGCATTCGATGAATTCGCCAAGTTAGCCGAAGAGGCTTCGAGA
TACACAAGCGAGACTGCGCCCCAGGGAGTTAAGGAGGGAGGAGAGGTTAT
GGCCATTCACTATCGAGAGGAGGAAGCGATTTATATCAAGGCCAGCCATG
ATCGTGTCACGGTGATCTTCAGCACAGTGTTCCGGGAGGAGACAGATCGC
ATCTTTGGCAAGGTGTTCCTGCAGGAATTCGTCGATGCCAGACGCCGTGT
CCTCACCCTGCAAAATGCTCCCCAGGTACTCTTCCGAAACGACTGTCCTC
TGGAGCTGGCCGGTGTGCCTGGCCTTCAGAACGGTAATGACGGTAGAATC
AGCTACGTCACTTTCGGTATATGCTTTTGCTAGACTATCACAACGTTCTC
ATCCACTCCCTCCTGACGGAGCGGTTCTCTGGTTCTCAACCGGGCGCGGC
CCGAGAACGAGGAGCGAGAAAGGAAGACGGCCAGTGGCCGTACTTTCAGG
GTTCAGGGATAGGCATACATCCACACTAGGATGCGCAAGAGGACCGCAGA
CTTCCTTCAAGTCTTGTTCCCTCGTCACCTAACCCCCAGAGACGCTATGA
GAACATCTCCCACATCCAGATATTCCGTGATTACTTCCATTACCACATCA
AAGCATCCAAGAACCCCGCCCGTATCAATCGATCAGATCGTTTCCGACTT
TGACGGAGTGACCTTTCATCTGTCTACGCCAGAATCCAAAACCAAGATCC
TCATCTCCATCAACGTGAAATGCTTCCGGGAGCTTGTCCAGTACGGCGCC
CAGGAGGTGCTGGAAAGGGAATACGGCCCCTACATTGTCACCCCAGAGCC
CGGCTATGACTTCTCCGTCCTGATCGATCTAGAGAACCTGCCCGCCGAGC
AAGAGGCGAAGGATGAACTCATCATGCGCCTGGCGCTGATGAAGCGCAAC
GCCATGGCCGCCCCCTTCGAGAGAGCATTCGATGAATTCGCCAAGTTAGC
CGAAGAGGCTTCGAGATACACAAGCGAGACTGCGCCCCAGGGAGTTAAGG
AGGGAGGAGAGGTTATGGCCATTCACTATCGAGAGGAGGAAGCGATTTAT
ATCAAGGCCAGCCATGATCGTGTCACGGTGATCTTCAGCACAGTGTTCCG
GGAGGAGACAGATCGCATCTTTGGCAAGGTGTTCCTGCAGGAATTCGTCG
ATGCCAGACGCCGTGTCCTCACCCTGCAAAATGCTCCCCAGGTACTCTTC
CGAAACGACTGTCCTCTGGAGCTGGCCGGTGTGCCTGGCCTTCAGAACGG
TAATGACGGTAGAATCAGCTACGTCACTTTCGGTATATGCTTTTGCTAGA
CTATCACAACGTTCTCATCCACTCCCTCCTGACGGAGCGGTTCTCTGGTT
CTCAACCGGGCGCGGCCCGAGAACGAGGAGCGAGAAAGGAAGACGGCCAG
TGGCCGTACTTTCAGGGTTCAGGGATAGGCATACATCCACACTAGGATGC
GCAAGAGGACCGCAGACTTCCTTCAAGTCTTGTTCCCTCGTCACCTAACC
CCCAGAGACGCTATGAGAACATCTCCCACATCCAGATATTCCGTGATTAC
TTCCATTACCACATCAAAGCATCCAAGAACCCCGCCCGTATCAATCGATC
AGATCGTTTCCGACTTTGACGGAGTGACCTTTCATCTGTCTACGCCAGAA
TCCAAAACCAAGATCCTCATCTCCATCAACGTGAAATGCTTCCGGGAGCT
TGTCCAGTACGGCGCCCAGGAGGTGCTGGAAAGGGAATACGGCCCCTACA
TTGTCACCCCAGAGCCCGGCTATGACTTCTCCGTCCTGATCGATCTAGAG
AACCTGCCCGCCGAGCAAGAGGCGAAGGATGAACTCATCATGCGCCTGGC
GCTGATGAAGCGCAACGCCATGGCCGCCCCCTTCGAGAGAGCATTCGATG
AATTCGCCAAGTTAGCCGAAGAGGCTTCGAGATACACAAGCGAGACTGCG
CCCCAGGGAGTTAAGGAGGGAGGAGAGGTTATGGCCATTCACTATCGAGA
GGAGGAAGCGATTTATATCAAGGCCAGCCATGATCGTGTCACGGTGATCT
TCAGCACAGTGTTCCGGGAGGAGACAGATCGCATCTTTGGCAAGGTGTTC
CTGCAGGAATTCGTCGATGCCAGACGCCGTGTCCTCACCCTGCAAAATGC
TCCCCAGGTACTCTTCCGAAACGACTGTCCTCTGGAGCTGGCCGGTGTGC
CTGGCCTTCAGAACGGTAATGACGGTAGAATCAGCTACGTCACTTTCGGT
ATATGCTTTTGCTAGACTATCACAACGTTCTCATCCACTCCCTCCTGACG
GAGCGGTTCTCTGGTTCTCAACCGGGCGCGGCCCGAGAACGAGGAGCGAG
AAAGGAAGACGGCCAGTGGCCGTACTTTCAGGGTTCAGGGATAGGCATAC
ATCCACACTAGGATGCGCAAGAGGACCGCAGACTTCCTTCAAGTCTTGTT
CCCTCGTCACCTAACCCCCAGAGACGCTATGAGAACATCTCCCACATCCA
GATATTCCGTGATTACTTCCATTACCACATCAAAGCATCCAAGAACCCCG
CCCGTATCAATCGATCAGATCGTTTCCGACTTTGACGGAGTGACCTTTCA
TCTGTCTACGCCAGAATCCAAAACCAAGATCCTCATCTCCATCAACGTGA
AATGCTTCCGGGAGCTTGTCCAGTACGGCGCCCAGGAGGTGCTGGAAAGG
GAATACGGCCCCTACATTGTCACCCCAGAGCCCGGCTATGACTTCTCCGT
CCTGATCGATCTAGAGAACCTGCCCGCCGAGCAAGAGGCGAAGGATGAAC
TCATCATGCGCCTGGCGCTGATGAAGCGCAACGCCATGGCCGCCCCCTTC
GAGAGAGCATTCGATGAATTCGCCAAGTTAGCCGAAGAGGCTTCGAGATA
CACAAGCGAGACTGCGCCCCAGGGAGTTAAGGAGGGAGGAGAGGTTATGG
CCATTCACTATCGAGAGGAGGAAGCGATTTATATCAAGGCCAGCCATGAT
CGTGTCACGGTGATCTTCAGCACAGTGTTCCGGGAGGAGACAGATCGCAT
CTTTGGCAAGGTGTTCCTGCAGGAATTCGTCGATGCCAGACGCCGTGTCC
TCACCCTGCAAAATGCTCCCCAGGTACTCTTCCGAAACGACTGTCCTCTG
GAGCTGGCCGGTGTGCCTGGCCTTCAGAACGGTAATGACGGTAGAATCAG
CTACGTCACTTTCGGTATATGCTTTTGCTAGACTATCACAACGTTCTCAT
CCACTCCCTCCTGACGGAGCGGTTCTCTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
GO:0005885Arp2/3 protein complex
Vocabulary: Biological Process
TermDefinition
GO:0030041actin filament polymerization
GO:0030833regulation of actin filament polymerization
GO:0034314Arp2/3 complex-mediated actin nucleation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_39910CAN33_39910Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39910-T1CAN33_39910-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39910-T1.cdsCAN33_39910-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39910-T1.exon5CAN33_39910-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_39910-T1.exon4CAN33_39910-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_39910-T1.exon3CAN33_39910-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_39910-T1.exon2CAN33_39910-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_39910-T1.exon1CAN33_39910-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09263EQZ
DBxrefInterPro:IPR007188
DBxrefInterPro:IPR034666
DBxrefPFAM:PF04045
ProductArp2/3 complex 34 kD subunit p34-Arc family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2323469..2324663 -
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